Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031671_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:198157946:198164050:1 gene:Zm00001d031671 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectin methyltransferase QUA2
Sequence

ATGTCGCGGCCGCTGTACAGGGGCGTGTCGGGGATCGGCGGCAAGCTGGCGGCGGCGGAC
GAGGCGTACTACGACCCCAAGGAGCCCAGCGAGAACGGCATTGGCGGGGGCTTCGGCCGG
GGCGGCGCGCGGAAGCGGCACCTCGCGGCCGCGGCGGTGAAGATCGGGGTCCTGCTGCTG
CTGGCGGCGGCGCTCGTGGGCTCGGTCGCGTGGGCGGGGACGCTCTACGCGGGGCGCGGC
GCGGCGGCGCGCGCGGCCGCAGCCGCCGCGCACCGCGGGTACCGGCGGCTGCAGGAGCAG
CTGGTCACGGACCTGCTCGACATCGGCGAGCTCGCGGGCGGCGGCGTCCGCGCCAAGGAG
GCGGAGGTGTGCCCGCCCGAGTACGACAACTACGTGCCCTGCTACTACAACATCACGGAC
GCCGTCGACGTCTCGGATCTGGGGGCCGGCGTCGTCATAAGCTACGACCGCCAGTGCACG
CGCGACGGCAGGGTCACTTGCCTCGTCGCGCCGCCGCGGAGCTACCGGGTTCCCGTGCGA
TGGCCCAGCGGCAAGGGCTTCATCTGGAAGGACAACGTGCGGATCAGCGGGCAGGAGTTC
TCGTCCGGAAGCCTGTTCAAGAGGATGATGGTGGAGGAGGACCAGATCTCGTTCCCGTCG
GACGCGCACATGGCCGACGGTGTGGAGGATTATGCCCATCAAATCGCTGAGATGATTGGG
TTGCGGAATGAATTCAATTTCAATGAGGCTGGGGTTAGGACAGTCCTTGACATAGAATGT
GGATTTGGTACCTTTGGGGCGCATCTTTTTGAGAGAGATCTCTTGACCATGTGCATTGCT
AACTATGAAGCATCAGGTAGCCAAGTCCAAATTACACTGGAGAGAGGCATTCCTGCAATG
ATTGGTTCATTTGCAACGAAGCAGCTTCCGTATCCCTATCTTTCCTTTGATATGGTGCAT
TGTGCTAAATGCAATATCGAATGGTACAAAAACGATGGCATTTTCTTGGTTGAAGTGAAC
AGGCTTTTGAGGCCTGGTGGATATTTTGTATGGACATCGAATTTGAATACACATAGGGCC
TTGCGAGACAAAGAAAACCAAAAGAAATGGACAGCCATTCGTGACTACGCTGAGGGCCTT
TGTTGGGAGATGCTGTCACAACAAGATGAGACAATTGTATGGAAAAAGACGAATAAAAGG
GAATGTTACAAATCAAGAAAATTTGGGCCTGAGCTATGTGGCCATGATCCAGAATCACCA
TACTACCAACCACTAAGCCCCTGCATATCAGGCACAAGAAGTCAGCGTTGGATCCCCATT
GAACACCGTACCACCTGGCCATCTCAGGCTAGGCAAAACTCAACAGAACTGGACATACAT
GGTGTGCATTCAGAAGTCTTCGCTGATGATAATTCAAGCTGGGACTCCATGGTGCGAAAC
TACTGGTCTTTGCTATCCCCACTTATATTTTCAGACCATCCAAAGAGACCTGGTGATGAA
GACCCACAACCACCATTTAACATGCTAAGGAATGTTTTAGATATGAATGCTCATTTTGGT
GGATTTAATGCTGCTTTACTGAAGTCTGGAAAGTCTGTATGGGTGATGAATGTTGTTCCT
ACAAATGCCCCAAATTATCTACCACTAATATTTGACCGTGGTTTTATTGGGGTTCAACAT
GATTGGTGTGACGCATTTGCAACTTACCCAAGAACATATGATATGGTGCATGCTGATGGC
TTTCTATCACTTGAGAAGACCCACAAGCATAGATGTTCTACTCTTGACATATTCTTGGAA
GTTGATCGCATCCTACGACCAGAGGGCTGGGTCATAATCCGTGACACCGCCCCTCTTATT
GAAGCGGCAAGATCTGTTGTTACTCAACTCAGATGGGATGCCCGTATTTTAGATCTTGAC
ATAGCTAGTGATGAAAAGCTACTCGTCTGTCAGAAGCCCTTTCTCAGAAAATAA

Peptide Sequence

PEP ID

Zm00001d031671_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:198157946:198164050:1 gene:Zm00001d031671 transcript:Zm00001d031671_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectin methyltransferase QUA2
Sequence

MSRPLYRGVSGIGGKLAAADEAYYDPKEPSENGIGGGFGRGGARKRHLAAAAVKIGVLLL
LAAALVGSVAWAGTLYAGRGAAARAAAAAAHRGYRRLQEQLVTDLLDIGELAGGGVRAKE
AEVCPPEYDNYVPCYYNITDAVDVSDLGAGVVISYDRQCTRDGRVTCLVAPPRSYRVPVR
WPSGKGFIWKDNVRISGQEFSSGSLFKRMMVEEDQISFPSDAHMADGVEDYAHQIAEMIG
LRNEFNFNEAGVRTVLDIECGFGTFGAHLFERDLLTMCIANYEASGSQVQITLERGIPAM
IGSFATKQLPYPYLSFDMVHCAKCNIEWYKNDGIFLVEVNRLLRPGGYFVWTSNLNTHRA
LRDKENQKKWTAIRDYAEGLCWEMLSQQDETIVWKKTNKRECYKSRKFGPELCGHDPESP
YYQPLSPCISGTRSQRWIPIEHRTTWPSQARQNSTELDIHGVHSEVFADDNSSWDSMVRN
YWSLLSPLIFSDHPKRPGDEDPQPPFNMLRNVLDMNAHFGGFNAALLKSGKSVWVMNVVP
TNAPNYLPLIFDRGFIGVQHDWCDAFATYPRTYDMVHADGFLSLEKTHKHRCSTLDIFLE
VDRILRPEGWVIIRDTAPLIEAARSVVTQLRWDARILDLDIASDEKLLVCQKPFLRK

Transcript Sequence

Transcript ID

Zm00001d031671_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:198157946:198164050:1 gene:Zm00001d031671 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pectin methyltransferase QUA2
Sequence

ACTGGTGTCAGTGTCCTGTCCCGTCCCGTGTTCATCTCTCCGCTCTTCCGTTCTGTCCTG
TGACGCGTGGGTAAAACGGCGAAGGGATTCTGGAGGGAAACGCCGAAGGGCCTCACTCGA
TTGCTACTTTGGTCTGGTACTGTACTGCTGCTGCTACCTTCTCTCTCCCCATTACTCGTG
TAATGGCGAGGACGCAATAGCGCTAGCGCTCAGTGGAGCGGCGGCGGCGGCGGCGGCAGC
AGCGCAGGCCATCGCGGAATTGCTCGCTGCTGCGGCCCAGTGGCGTGGCGGCCCGCGTGT
CGCGCTCCATGCGGCACTGGTGCGCCTCGTGAGATCCATCCGCAGCAGCAGGCATGTCGC
GGCCGCTGTACAGGGGCGTGTCGGGGATCGGCGGCAAGCTGGCGGCGGCGGACGAGGCGT
ACTACGACCCCAAGGAGCCCAGCGAGAACGGCATTGGCGGGGGCTTCGGCCGGGGCGGCG
CGCGGAAGCGGCACCTCGCGGCCGCGGCGGTGAAGATCGGGGTCCTGCTGCTGCTGGCGG
CGGCGCTCGTGGGCTCGGTCGCGTGGGCGGGGACGCTCTACGCGGGGCGCGGCGCGGCGG
CGCGCGCGGCCGCAGCCGCCGCGCACCGCGGGTACCGGCGGCTGCAGGAGCAGCTGGTCA
CGGACCTGCTCGACATCGGCGAGCTCGCGGGCGGCGGCGTCCGCGCCAAGGAGGCGGAGG
TGTGCCCGCCCGAGTACGACAACTACGTGCCCTGCTACTACAACATCACGGACGCCGTCG
ACGTCTCGGATCTGGGGGCCGGCGTCGTCATAAGCTACGACCGCCAGTGCACGCGCGACG
GCAGGGTCACTTGCCTCGTCGCGCCGCCGCGGAGCTACCGGGTTCCCGTGCGATGGCCCA
GCGGCAAGGGCTTCATCTGGAAGGACAACGTGCGGATCAGCGGGCAGGAGTTCTCGTCCG
GAAGCCTGTTCAAGAGGATGATGGTGGAGGAGGACCAGATCTCGTTCCCGTCGGACGCGC
ACATGGCCGACGGTGTGGAGGATTATGCCCATCAAATCGCTGAGATGATTGGGTTGCGGA
ATGAATTCAATTTCAATGAGGCTGGGGTTAGGACAGTCCTTGACATAGAATGTGGATTTG
GTACCTTTGGGGCGCATCTTTTTGAGAGAGATCTCTTGACCATGTGCATTGCTAACTATG
AAGCATCAGGTAGCCAAGTCCAAATTACACTGGAGAGAGGCATTCCTGCAATGATTGGTT
CATTTGCAACGAAGCAGCTTCCGTATCCCTATCTTTCCTTTGATATGGTGCATTGTGCTA
AATGCAATATCGAATGGTACAAAAACGATGGCATTTTCTTGGTTGAAGTGAACAGGCTTT
TGAGGCCTGGTGGATATTTTGTATGGACATCGAATTTGAATACACATAGGGCCTTGCGAG
ACAAAGAAAACCAAAAGAAATGGACAGCCATTCGTGACTACGCTGAGGGCCTTTGTTGGG
AGATGCTGTCACAACAAGATGAGACAATTGTATGGAAAAAGACGAATAAAAGGGAATGTT
ACAAATCAAGAAAATTTGGGCCTGAGCTATGTGGCCATGATCCAGAATCACCATACTACC
AACCACTAAGCCCCTGCATATCAGGCACAAGAAGTCAGCGTTGGATCCCCATTGAACACC
GTACCACCTGGCCATCTCAGGCTAGGCAAAACTCAACAGAACTGGACATACATGGTGTGC
ATTCAGAAGTCTTCGCTGATGATAATTCAAGCTGGGACTCCATGGTGCGAAACTACTGGT
CTTTGCTATCCCCACTTATATTTTCAGACCATCCAAAGAGACCTGGTGATGAAGACCCAC
AACCACCATTTAACATGCTAAGGAATGTTTTAGATATGAATGCTCATTTTGGTGGATTTA
ATGCTGCTTTACTGAAGTCTGGAAAGTCTGTATGGGTGATGAATGTTGTTCCTACAAATG
CCCCAAATTATCTACCACTAATATTTGACCGTGGTTTTATTGGGGTTCAACATGATTGGT
GTGACGCATTTGCAACTTACCCAAGAACATATGATATGGTGCATGCTGATGGCTTTCTAT
CACTTGAGAAGACCCACAAGCATAGATGTTCTACTCTTGACATATTCTTGGAAGTTGATC
GCATCCTACGACCAGAGGGCTGGGTCATAATCCGTGACACCGCCCCTCTTATTGAAGCGG
CAAGATCTGTTGTTACTCAACTCAGATGGGATGCCCGTATTTTAGATCTTGACATAGCTA
GTGATGAAAAGCTACTCGTCTGTCAGAAGCCCTTTCTCAGAAAATAAGGAGCACAAGCAC
AGTAGACACTGACACAAGATATGAACTTATTCTTTCACCCTATACTGTTACAGTTATTGT
CTGAGCAGAACTGAGTACAAAGCTTGGGACGAAAACACGGGAAGGTGCCATTAGATTGGT
TAGTAAGTGCATGCTGCAGAGAACAGGCTTGGTGGCAAAGCTTTCCAGGCCAAGGTTTTA
TTGCCAAGACACAGAGATGAAGCCATGAAATTACTTTAGTGGTGAAAACCATATCCAATA
AAGGGATGACGCTGCGGTGTACATAATCGCGGTCAATGTGCCATATAGGTATAATTCGTT
TTCTCCTTATTACAGTTTCTCTCTCTCTTTTTTTTGTAGTTGTACCGATTTGTTTTTGTA
TCTTGTATGTAAATTGATTGGTCTATATACTGGTCATCCCAGACTACAGTCTAGTGAAAC
CAATATAATTATTATTTGGAGATGAATGATAAGCAAGAACACTTTATAACTGTTGCACTA
TATCTTTCTACCATTTGTACAGTTCATTTGTACATTATCGGGAACAAGAGTGACACTATC
ATTATTCAAGAAGAATACATGGTTACTGTAAGAGGAATGTGTCAATGTTTCTTTACTGTG
GTTATTACAATCTTGCAGGGTTTTTTTTTGGCCATTTAACGTTAGTCGGAGCTACTGAGG
TGAGCTGGTATTGCTCTGTGGCTTCAACCTCCCGTGCTTTTGTGGAGGATTGCGCGTCCA
GTTCATGTTAGCTGTAGTTTGGTATCTGCCACAACCAATTGGGCTGCCCCATTGCGACGG
TGATGTGCCACCTTAATCCGAAGGGATTAGCTTGTCATTCTTCCGTGGTTTGGACCATCC
CCTTTTGCCTGCTTGTATGTTTGACTCTGCTAATACTCTGGGCTAGCATAAAAAAAATTA
ACTAGAAAATGGTAACAACAGGTTAGATCGTGTTTAATAGTTTACCCATATGTGTTCGCT
TGGCTTTAACCCTAAAGGACTTTTAATGTTTTTACAGTGTTTTATTTCTATGAATTGCAG
TAGCAGCAGTTCGAACAGTTGACTTTAATCTGAAACGAACAACCTATATTTGAATACGAT
TTATGAGTATATGGATGTGTAAGCTGTTGAAGATAGCCATAGAGGTTTTATTATAGCACA
CTTCATGATGTC