Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031617_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:196224625:196228047:1 gene:Zm00001d031617 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sulfite oxidase1 description: sulfite oxidase1
Sequence

ATGCCCGGGCTCACGGCACCGTCCGACTACGCGGAGGAGCCGCCGCGTCACCCGGCCCTC
AAGATCAACTCCAAGGAGCCATTCAATGCTGAGCCTCACCGATCAGAGCTAGTCGCATCT
TACATCACCCCAGTGGATTTCTTCTACAAGAGGAATCATGGACCCATCCCTAAAGTCGAG
GACCTCTCAAGATACACTGTTTCCATTTCTGGTCTCGTCAACAAGTCCATTCAGCTATCG
ATGGCTGACATTTGGTCTCTTCCAAAGTACAATGTCACAGCAACTTTACAGTGTGCAGGA
AACAGGAGGACTGCGATGAGTAACGTACGGAAAGTGAGAGGTGTTGGGTGGGACATATCT
GCTCTTGGAACTGCAACTTGGGGAGGTGCCAAACTATCTGATGTCCTTGAGCTAGTTGGA
ATACCAAAACTCAGTTCAGTCACGTCTCTAGGAGGGAAACACGTTGAGTTTGTTAGCGTT
GACAAGTGTAAAGTACTCAACCGAGACCACGGATACCCGCTCCGGGTTGTTGTACCTGGA
GTTATTGGTGCACGCTCTGTAAAATGGCTGGACAGTATCAACGTAAAAGAGGAGGAATGC
CAGGGGTTTTTTATGCAAAAAGATTACAAAATGTTTCCGCCAACCGTGGACTGGGACAAC
ATTAACTGGTCAACTAGAAGGCCACAGATGGATTTCCCTGTGCAGTCTGCTATCTGTACA
CTGGAAGATGTAGATGTTATCAAGGAAGGACAGGCTAGGATTGCTGGATATGCACTTTCA
GGTGGTGGCCGTGGCATTGAGAGAGTGGATGTATCAGCTGATGGGGGTAAGACCTGGGTC
GAGGCTCGTAGATACCAGAAAGACAATGTGGCGTATGTGTCAGATGGACCTCAAAGTGAT
AAGTGGGCTTGGGTTCTCTTTGAGGCCACATTAGACGTACCAGCGAATCCTGAGATCGTA
GTTAAGGCGGTGGACTCAGCTGCAAACGTTCAGCCCGAGAAGGTAGAAGACATATGGAAT
CTGAGGGGAATCCTCAACACGTCTTGGCATCGGATCAAAATCCAGAGATCTTCGTGCGTT
GAAAGATCTAAGCTGTGA

Peptide Sequence

PEP ID

Zm00001d031617_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:196224625:196228047:1 gene:Zm00001d031617 transcript:Zm00001d031617_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sulfite oxidase1 description: sulfite oxidase1
Sequence

MPGLTAPSDYAEEPPRHPALKINSKEPFNAEPHRSELVASYITPVDFFYKRNHGPIPKVE
DLSRYTVSISGLVNKSIQLSMADIWSLPKYNVTATLQCAGNRRTAMSNVRKVRGVGWDIS
ALGTATWGGAKLSDVLELVGIPKLSSVTSLGGKHVEFVSVDKCKVLNRDHGYPLRVVVPG
VIGARSVKWLDSINVKEEECQGFFMQKDYKMFPPTVDWDNINWSTRRPQMDFPVQSAICT
LEDVDVIKEGQARIAGYALSGGGRGIERVDVSADGGKTWVEARRYQKDNVAYVSDGPQSD
KWAWVLFEATLDVPANPEIVVKAVDSAANVQPEKVEDIWNLRGILNTSWHRIKIQRSSCV
ERSKL

Transcript Sequence

Transcript ID

Zm00001d031617_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:196224625:196228047:1 gene:Zm00001d031617 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:sulfite oxidase1 description: sulfite oxidase1
Sequence

GTCGCCGAGTCACCACTCACCACACACCAAACAAAGCAGGGGCCAGGGGAGCCCACTTCG
AGGCCGCGGCGTTGGCTGTCTCGGTGTCATCGTCTCCTCTCGTCTCGTTCTCTTCTCCTC
ACCTCCTTCGTTTCGCGGAGCAGAGCGAGCAGCCGGGACCGGACCTCCAGGGAGCGCACC
GCGGAGGCTAGCGAAGATGCCCGGGCTCACGGCACCGTCCGACTACGCGGAGGAGCCGCC
GCGTCACCCGGCCCTCAAGATCAACTCCAAGGAGCCATTCAATGCTGAGCCTCACCGATC
AGAGCTAGTCGCATCTTACATCACCCCAGTGGATTTCTTCTACAAGAGGAATCATGGACC
CATCCCTAAAGTCGAGGACCTCTCAAGATACACTGTTTCCATTTCTGGTCTCGTCAACAA
GTCCATTCAGCTATCGATGGCTGACATTTGGTCTCTTCCAAAGTACAATGTCACAGCAAC
TTTACAGTGTGCAGGAAACAGGAGGACTGCGATGAGTAACGTACGGAAAGTGAGAGGTGT
TGGGTGGGACATATCTGCTCTTGGAACTGCAACTTGGGGAGGTGCCAAACTATCTGATGT
CCTTGAGCTAGTTGGAATACCAAAACTCAGTTCAGTCACGTCTCTAGGAGGGAAACACGT
TGAGTTTGTTAGCGTTGACAAGTGTAAAGTACTCAACCGAGACCACGGATACCCGCTCCG
GGTTGTTGTACCTGGAGTTATTGGTGCACGCTCTGTAAAATGGCTGGACAGTATCAACGT
AAAAGAGGAGGAATGCCAGGGGTTTTTTATGCAAAAAGATTACAAAATGTTTCCGCCAAC
CGTGGACTGGGACAACATTAACTGGTCAACTAGAAGGCCACAGATGGATTTCCCTGTGCA
GTCTGCTATCTGTACACTGGAAGATGTAGATGTTATCAAGGAAGGACAGGCTAGGATTGC
TGGATATGCACTTTCAGGTGGTGGCCGTGGCATTGAGAGAGTGGATGTATCAGCTGATGG
GGGTAAGACCTGGGTCGAGGCTCGTAGATACCAGAAAGACAATGTGGCGTATGTGTCAGA
TGGACCTCAAAGTGATAAGTGGGCTTGGGTTCTCTTTGAGGCCACATTAGACGTACCAGC
GAATCCTGAGATCGTAGTTAAGGCGGTGGACTCAGCTGCAAACGTTCAGCCCGAGAAGGT
AGAAGACATATGGAATCTGAGGGGAATCCTCAACACGTCTTGGCATCGGATCAAAATCCA
GAGATCTTCGTGCGTTGAAAGATCTAAGCTGTGAAATTAAGTACGCAGCTGACCACTTGG
AGAAAGCACACTCACTTTACCATTGTCCCTGAATAATAATTAGTCACTTCAACTTTATGC
GTCTGTGGAGTAAGGTTGTACGAGTGTTGTGGCTGTGTCATTATGGGATTTGAGCTCACT
TGGTTTCTGTGTAAATGTCAGCTGCTGCGGTTTTTTTTTGGTTGGTCAGGTTTGATATCG
AGAAATATCCATTGCATTCTGCGTT