Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031611_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:1:196150701:196153475:-1 gene:Zm00001d031611 gene_biotype:protein_coding transcript_biotype:protein_coding description: ribosomal protein L17c
Sequence

ATGGTGAAGTACTCGCAGGAGCCGGGCAACCCTACCAAGTCGGCTAAGGCCATGGGCAGG
GATCTGAGGGTCCACTTCAAGAACACAAGGGAGACAGCCTTTGCGCTTCGCAAGTTGTCT
TTGACCAAGGCTAAGCGATACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTC
CGGAGATACTGTGGGGGTGTTGGTCGCACCGCGCAAGCTAAGTCGCGCCACTCCAATGGG
CAGGGCCGCTGGCCCGTTAAATCAGCCAGGTTCATCCTGGATTTGCTGAAGAATGCTGAG
AGTAACGCTGATGTGAAAGGCTTGGATGTGGACAACCTCTATGTTTCACACATCCAGGTG
AATCAAGCCCAGAAGCAGAGGCGCCGCACCTACCGTGCTCACGGGCGCATCAATCCCTAC
ATGTCCTCACCTTGCCACATTGAGCTGATCTTGTCAGAGAAGGAAGAGCCTGTGAAGAAA
GAGGCTGACAACATTGTCGCAGCAAGGAAGCAGTGA

Peptide Sequence

PEP ID

Zm00001d031611_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:1:196150701:196153475:-1 gene:Zm00001d031611 transcript:Zm00001d031611_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description: ribosomal protein L17c
Sequence

MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLSLTKAKRYLEDVIAHKQAIPF
RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV
NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARKQ

Transcript Sequence

Transcript ID

Zm00001d031611_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:196150701:196153475:-1 gene:Zm00001d031611 gene_biotype:protein_coding transcript_biotype:protein_coding description: ribosomal protein L17c
Sequence

ATATTTCAGCCCGTTCTTTTAGCTAGCCCATCAGCCCATTTAGAGCGCGTTAGCACTAGG
GTTTCACCAGCTCTTAAGGCCGCCGCCGCCTCGGTGCCTCCTCGCTTCGAAGTGTTCGTG
CGAAGGCGACCCTCCCTCCTTCGCTCCTTCCGCGCCGCCTCCCGGCCGTCGCCGCCATGG
TGAAGTACTCGCAGGAGCCGGGCAACCCTACCAAGTCGGCTAAGGCCATGGGCAGGGATC
TGAGGGTCCACTTCAAGAACACAAGGGAGACAGCCTTTGCGCTTCGCAAGTTGTCTTTGA
CCAAGGCTAAGCGATACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCCGGA
GATACTGTGGGGGTGTTGGTCGCACCGCGCAAGCTAAGTCGCGCCACTCCAATGGGCAGG
GCCGCTGGCCCGTTAAATCAGCCAGGTTCATCCTGGATTTGCTGAAGAATGCTGAGAGTA
ACGCTGATGTGAAAGGCTTGGATGTGGACAACCTCTATGTTTCACACATCCAGGTGAATC
AAGCCCAGAAGCAGAGGCGCCGCACCTACCGTGCTCACGGGCGCATCAATCCCTACATGT
CCTCACCTTGCCACATTGAGCTGATCTTGTCAGAGAAGGAAGAGCCTGTGAAGAAAGAGG
CTGACAACATTGTCGCAGCAAGGAAGCAGTGAAGTATATCAGCATGCTGATCGAGGCCAT
TTTGTCGAAGTATTATAGCCGTAGCTCTTTTATGTACCTTTTCAGGCAGGCACCGATGTT
TTAAATCTGGATTATCTATGTTCTGTACTGAACTACTGTGTTGGACTGTAAGTTCAGCTC
GTAATACAATAGCTCT