Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031581_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:1:195395035:195397338:1 gene:Zm00001d031581 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
Sequence

AGGTTTTGCCAGGATGATGGGACATGGAGACGTGAGCTTTATAAGGATTCTAGAGGAACT
CAGACTTCATCTGAACCTACTTCCAGAAATCTGGAATCGAACAAAAAATCCCAAGTGCAG
CAAAAGGTTGTGAAGAAATTACCAGTTTCAGATCTTCGTGGAAAGTTATCTGGTGTCGCG
AGCCAGCGCCCTCAACTTAGCAGTACTGTTCAGGTCCCAAAACCTGTAAAAGAGGTTATT
AAGAGCAACAAACCTGTTCAAAAGAGAGACCCCGCTCCAACTACTGCCCCTCCTGACATC
AAGAAACCCAGTGCACCTGCACCTGTACCAGCACCATCTGCATTACCAAAGCAATCCCAG
AACAAGGTGAGATGGTTGAGGATCTATGTTGTGTTTTCCTACAAGATTGTATCCTGA

Peptide Sequence

PEP ID

Zm00001d031581_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:1:195395035:195397338:1 gene:Zm00001d031581 transcript:Zm00001d031581_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
Sequence

RFCQDDGTWRRELYKDSRGTQTSSEPTSRNLESNKKSQVQQKVVKKLPVSDLRGKLSGVA
SQRPQLSSTVQVPKPVKEVIKSNKPVQKRDPAPTTAPPDIKKPSAPAPVPAPSALPKQSQ
NKVRWLRIYVVFSYKIVS

Transcript Sequence

Transcript ID

Zm00001d031581_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:195395035:195397338:1 gene:Zm00001d031581 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
Sequence

AGGTTTTGCCAGGATGATGGGACATGGAGACGTGAGCTTTATAAGGATTCTAGAGGAACT
CAGACTTCATCTGAACCTACTTCCAGAAATCTGGAATCGAACAAAAAATCCCAAGTGCAG
CAAAAGGTTGTGAAGAAATTACCAGTTTCAGATCTTCGTGGAAAGTTATCTGGTGTCGCG
AGCCAGCGCCCTCAACTTAGCAGTACTGTTCAGGTCCCAAAACCTGTAAAAGAGGTTATT
AAGAGCAACAAACCTGTTCAAAAGAGAGACCCCGCTCCAACTACTGCCCCTCCTGACATC
AAGAAACCCAGTGCACCTGCACCTGTACCAGCACCATCTGCATTACCAAAGCAATCCCAG
AACAAGGTGAGATGGTTGAGGATCTATGTTGTGTTTTCCTACAAGATTGTATCCTGATCG
GTTATTGTGGTTCCACTATTTGTTCTTCTGGAATGGGAAACATTGTACCATCATTTTTCT
TATTTTCCATTTGCTGTGGTGCTGTCCTGTGAATATAATGGACTACATGACCATTTGATG
TTGGAGTCCCTTTGATGTTTGTACAACCTTTGGTTCTAAATTTGATCTAGTGCATGGTTA
ATCTTCTAGACCTTTAGCATGTTCGAATTCCTAAGGAAATTTCGATCTAGTGCATGATTA
ATCTTCTAGCTCTTTAGCATGTTTGAATTCCAAAGTTTCATTTGTCTAGTCCCTTGCTGG
CACTGTTGTGTCTAAATTCCTGAATGGAATTTGGTCTTCATAAACATTCAATTCAATGCT
GTAATAAATTGTTCCCTTTCTTCGATATGTGCAGATTGATGCTTCGCTTGACAGTTTACT
GAAGTCTCTTGATCTAGAGAAGTATTTGATAAATTTCCAGGCTGAAGAGGTTGATATGAA
AGCATTGGTTTACATGAATGAAGAAGATATGAAGTCTTTAGGAATTCCAATGGGTCCCAG
GAAAAAGATACTATCAGCATTGGCTCACAGAAAGAACAAGTCTTCGAAGTCATTGCCTAC
CAGTACCAGTTGAGGCATCTTTAAGCTTGTGTGGTAGCTAGACAACTTGTTGATCTTGGA
TATGTGCAAGTGCATCATCGACCTGCAGAGTTAACTCCACTGACGAGCAAGATTCCTATC
CATCAAGGCTGATGCGGTGTATAAGTAGAGAACTCCGTGATGTTGGTAGTTGAAGGCAAC
CAACTGATTGTTGATGTCCCTCCTATTCTGTGATCTCCGGAATATTTGTTGATCATTGGG
TGTTAATTCATGATGATGCCTTGGGGATTGTTTCCCCTTGTCCGGCAAACCCAATTCTTG
C