Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031534_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:193343064:193348037:-1 gene:Zm00001d031534 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ypt/Rab-GAP domain of gyp1p superfamily protein
Sequence	ATGGCGGAGGAGGACAGGCAGCGGCGGTGGCGGCGGCGGCGGTTCGCGAACCTGCGCAGC GTCCGGTGGCGGATCGATCTCGGCATCCTGCCGGCGTCGCCCGGGGCCTCCGTCGACGAG CTCCGCCGCGCCGCCGCGGATTCGCGGAGGAGGTATGTTAGTTTGAGGCGCCGCCTTATG GTAGACCCGCATCTTCCAAAGGAGGAGGACAGATCATCCAACCTTGTTGTTGACAACCCG CTCTCTCAGAACCCAGATAGCAGCTGGGGCCGCTTCTTTAGAGGGGCTGAGTTGGAGAAG ACAGTTGACCAAGACCTGTCTCGATTATATCCAGAAGATGGTAGTTACTTTCAAACGCCT AGTTGCCAGGCCATGCTCAGGAGAATACTGTTGATGTGGTGCCTTCAGCACCCAGAGTGT GGATATCGCCAAGGAATGCACGAACTACTAGCTCCTCTAGTGTATGTTCTTCAAGTTGAC ATTGATAAACTATCTCAAGTAAGGAAGCTCCATGAGGATTGCTTCAATGATGATTTTGAT GGAGTGGCTTTCCCAGATACAGATATGCTTTTCAGTTATAAACCTAGAAAGGACTCAAAC TGGCATTCCAGGGCTGACAATGGCGATGATTCTGAAAGCGCTTCCAGAGTTAACACTCTT GATGAGCTTGACCTGGATACGAAGGAAATAATTTCACTTAGTGATGCATATGGAGCCGAG GGTGAACTAGGCATTGTATTGTCTGAAAGGTTCATGGAACATGATGCTTATTCAATGTTT GATGGTTTGATGGACGGAGGTAGTGGAGTGGTCTGCATGGCAGAGTTTTTCTCTACATCC AAGGTTGGATCTAGCTCAAGTCTAGCACCTGTCATTGAAGCCTCAGCATCTTTATTTCAT TTGCTTTCCATTGTTGAGCCATCTCTTCATAGCCATTTCATTGAGCTGGATGTAGAACCG CAGTATTTCGCTCTTCGTTGGCTGCGAGTCTTGTTTGGACGAGAGTTCTGCCTCGACGAT CTTTTAGTTGTATGGGATGAAGTTTTTGCTTGCTCCAATGATATGCTACTTAGAGAAAAT GAAGAATGCAACTTTAAGATATTGTGCTCATCTAGAGGGGCATTCATCGCAGCCATGGCG GTCTCTATGATTCTTCACCTTAGATCATCTCTACTAGCCACTGAAATCAATACGTTATGT CTTCAGAGGTTATTGAATTTTCCAAACAACGTTGATGTGCATAAGTTAATTGAGAAAGCT AAATCTCTACAGTCTACTGCTATTGATGCGAATACATTATCCCCATCTCTTTTATCAAAG AAGGATAGCTGTGATTATGATAGAGTTTATAGTAATCTTGCTACTTCAACTCCTCCAAGG ACTCCGTTGCATCCATTAGCTGAGAGTTACTGGGAAGAGCAGTGGAGAAACCTGCATAAT GACGGAACTGCTCTTAAGGAGAGTGATAATAAGGGTCTTTCTTATAAGAGATCATTAAAG CAATCTTTGAGTCAGAGGCTTGGTTTATCTAGGACAGAGTCAGATCCTTCTCCAGTTAAG GTAGTCAGTGTGAATAATGACGCGAGGAATTCAGTGAGACGGTGTCTTCTAAACTCTTAT TCAGATAAAGTAGTACAATCCAATGAAGTTATTGGAAAATTTGAGCAAGATAAATTTCCT ATCGTGTCGATTCACAAGGAGACTATTTTGAGTTCTGAAAGGTCTTCACAGCTAAAGCTA AAGGCGGCTAGTGAGAATTTAACAGTAAGTCCACCACCAAGTGTGGCGAAGTTCAATCCA CTTATAGATTCACCGGTGAAGCCTGCTGACGAGAGTTCAGCGAAAAGGACAGAAGATTGT TCCAGTGGTGAAAATTCTCCAGTGTTTTATACAGCTAGGGCTGGTAATGAACATGAGAAT TGTCATGATAATGATTCCGAGAAGAGCAGTATTACTTCAAATTCATGCGCCGGTGATGAT TATAGAGACGAAGTCTTGCCAGACGAGTCGTCCAGCTGTAACTGCGAGGATAAAACCGTC TCAGAAGCAATAGAGTCTGGAGCAAATGTAGGTCAAACTAGACCCTTGGAGAAAACCATG GTACCTAATGAAAGAAAGCCATTTATTAACAAGCTGCAGTGGCTGTTGAGGTTTGGCAGA CCATCAGCTGAAGGCAATGTGGTGGAGAAGGGCAGTGGTCAGGCATCATCGGATGGTAAA CATGACGCGGTTCCTCCCTGCCCTTCACCTGCTGATGCGAGTTCAGATAACTCTTGCAGC GGCATAAATTTGGCTTATGGCGATAATAAGAAGGTGATGGGCACGCTGAAGAATATCGGG CAGAACATGCTCGAAAACATCCAGGTGATCGAAACGGCGTTCCAGCAGGACCGCGCGCAG CCCAGCGCCATGGAGAACTTGTCGAACAACATCCTGGGAGGCAAAGGGCAGGTCACCGCG ATGGCTGCCCTGACAGAGCTCCGCAAGATCAGCAACCTGCTGCGCGAGATGTGA

Peptide Sequence

PEP ID	Zm00001d031534_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:193343064:193348037:-1 gene:Zm00001d031534 transcript:Zm00001d031534_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ypt/Rab-GAP domain of gyp1p superfamily protein
Sequence	MAEEDRQRRWRRRRFANLRSVRWRIDLGILPASPGASVDELRRAAADSRRRYVSLRRRLM VDPHLPKEEDRSSNLVVDNPLSQNPDSSWGRFFRGAELEKTVDQDLSRLYPEDGSYFQTP SCQAMLRRILLMWCLQHPECGYRQGMHELLAPLVYVLQVDIDKLSQVRKLHEDCFNDDFD GVAFPDTDMLFSYKPRKDSNWHSRADNGDDSESASRVNTLDELDLDTKEIISLSDAYGAE GELGIVLSERFMEHDAYSMFDGLMDGGSGVVCMAEFFSTSKVGSSSSLAPVIEASASLFH LLSIVEPSLHSHFIELDVEPQYFALRWLRVLFGREFCLDDLLVVWDEVFACSNDMLLREN EECNFKILCSSRGAFIAAMAVSMILHLRSSLLATEINTLCLQRLLNFPNNVDVHKLIEKA KSLQSTAIDANTLSPSLLSKKDSCDYDRVYSNLATSTPPRTPLHPLAESYWEEQWRNLHN DGTALKESDNKGLSYKRSLKQSLSQRLGLSRTESDPSPVKVVSVNNDARNSVRRCLLNSY SDKVVQSNEVIGKFEQDKFPIVSIHKETILSSERSSQLKLKAASENLTVSPPPSVAKFNP LIDSPVKPADESSAKRTEDCSSGENSPVFYTARAGNEHENCHDNDSEKSSITSNSCAGDD YRDEVLPDESSSCNCEDKTVSEAIESGANVGQTRPLEKTMVPNERKPFINKLQWLLRFGR PSAEGNVVEKGSGQASSDGKHDAVPPCPSPADASSDNSCSGINLAYGDNKKVMGTLKNIG QNMLENIQVIETAFQQDRAQPSAMENLSNNILGGKGQVTAMAALTELRKISNLLREM

Transcript Sequence

Transcript ID	Zm00001d031534_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:193343064:193348037:-1 gene:Zm00001d031534 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ypt/Rab-GAP domain of gyp1p superfamily protein
Sequence	ACCCACGATAAGCCAAGTCATCCACCCCACTCCCTGCCTACCAGGAGCCAAGTCATCCAC CCCCTCCCCCGACGAGGCAGGCAGGGACAGGGCACCACGCCATTCTCGCGCGAGGAGAGG GCACAGGAAAGAAAAAGAAAAAAATCACCTCCTTCAACCTCTCCCCCTCCTCCACCGAAA TCATCCTCCAGAATCTCCCGATCTTTACTCCGCCCAAAGATCCTATACACGCGCGGCTAT TTGTAGCGTCTGCCCTGCCCTGCCCGGCCTCGTGGAAAGGCGCTCCGCTCTTGGCTCTCC CCACCTGCGGGCGGGGGCTGTTGGTTCGGGGGGGAGGCAGTCAAATCCGCCTGCGGCTGA ATCGGGGGAGAGGGCCCGCATGGCGGAGGAGGACAGGCAGCGGCGGTGGCGGCGGCGGCG GTTCGCGAACCTGCGCAGCGTCCGGTGGCGGATCGATCTCGGCATCCTGCCGGCGTCGCC CGGGGCCTCCGTCGACGAGCTCCGCCGCGCCGCCGCGGATTCGCGGAGGAGGTATGTTAG TTTGAGGCGCCGCCTTATGGTAGACCCGCATCTTCCAAAGGAGGAGGACAGATCATCCAA CCTTGTTGTTGACAACCCGCTCTCTCAGAACCCAGATAGCAGCTGGGGCCGCTTCTTTAG AGGGGCTGAGTTGGAGAAGACAGTTGACCAAGACCTGTCTCGATTATATCCAGAAGATGG TAGTTACTTTCAAACGCCTAGTTGCCAGGCCATGCTCAGGAGAATACTGTTGATGTGGTG CCTTCAGCACCCAGAGTGTGGATATCGCCAAGGAATGCACGAACTACTAGCTCCTCTAGT GTATGTTCTTCAAGTTGACATTGATAAACTATCTCAAGTAAGGAAGCTCCATGAGGATTG CTTCAATGATGATTTTGATGGAGTGGCTTTCCCAGATACAGATATGCTTTTCAGTTATAA ACCTAGAAAGGACTCAAACTGGCATTCCAGGGCTGACAATGGCGATGATTCTGAAAGCGC TTCCAGAGTTAACACTCTTGATGAGCTTGACCTGGATACGAAGGAAATAATTTCACTTAG TGATGCATATGGAGCCGAGGGTGAACTAGGCATTGTATTGTCTGAAAGGTTCATGGAACA TGATGCTTATTCAATGTTTGATGGTTTGATGGACGGAGGTAGTGGAGTGGTCTGCATGGC AGAGTTTTTCTCTACATCCAAGGTTGGATCTAGCTCAAGTCTAGCACCTGTCATTGAAGC CTCAGCATCTTTATTTCATTTGCTTTCCATTGTTGAGCCATCTCTTCATAGCCATTTCAT TGAGCTGGATGTAGAACCGCAGTATTTCGCTCTTCGTTGGCTGCGAGTCTTGTTTGGACG AGAGTTCTGCCTCGACGATCTTTTAGTTGTATGGGATGAAGTTTTTGCTTGCTCCAATGA TATGCTACTTAGAGAAAATGAAGAATGCAACTTTAAGATATTGTGCTCATCTAGAGGGGC ATTCATCGCAGCCATGGCGGTCTCTATGATTCTTCACCTTAGATCATCTCTACTAGCCAC TGAAATCAATACGTTATGTCTTCAGAGGTTATTGAATTTTCCAAACAACGTTGATGTGCA TAAGTTAATTGAGAAAGCTAAATCTCTACAGTCTACTGCTATTGATGCGAATACATTATC CCCATCTCTTTTATCAAAGAAGGATAGCTGTGATTATGATAGAGTTTATAGTAATCTTGC TACTTCAACTCCTCCAAGGACTCCGTTGCATCCATTAGCTGAGAGTTACTGGGAAGAGCA GTGGAGAAACCTGCATAATGACGGAACTGCTCTTAAGGAGAGTGATAATAAGGGTCTTTC TTATAAGAGATCATTAAAGCAATCTTTGAGTCAGAGGCTTGGTTTATCTAGGACAGAGTC AGATCCTTCTCCAGTTAAGGTAGTCAGTGTGAATAATGACGCGAGGAATTCAGTGAGACG GTGTCTTCTAAACTCTTATTCAGATAAAGTAGTACAATCCAATGAAGTTATTGGAAAATT TGAGCAAGATAAATTTCCTATCGTGTCGATTCACAAGGAGACTATTTTGAGTTCTGAAAG GTCTTCACAGCTAAAGCTAAAGGCGGCTAGTGAGAATTTAACAGTAAGTCCACCACCAAG TGTGGCGAAGTTCAATCCACTTATAGATTCACCGGTGAAGCCTGCTGACGAGAGTTCAGC GAAAAGGACAGAAGATTGTTCCAGTGGTGAAAATTCTCCAGTGTTTTATACAGCTAGGGC TGGTAATGAACATGAGAATTGTCATGATAATGATTCCGAGAAGAGCAGTATTACTTCAAA TTCATGCGCCGGTGATGATTATAGAGACGAAGTCTTGCCAGACGAGTCGTCCAGCTGTAA CTGCGAGGATAAAACCGTCTCAGAAGCAATAGAGTCTGGAGCAAATGTAGGTCAAACTAG ACCCTTGGAGAAAACCATGGTACCTAATGAAAGAAAGCCATTTATTAACAAGCTGCAGTG GCTGTTGAGGTTTGGCAGACCATCAGCTGAAGGCAATGTGGTGGAGAAGGGCAGTGGTCA GGCATCATCGGATGGTAAACATGACGCGGTTCCTCCCTGCCCTTCACCTGCTGATGCGAG TTCAGATAACTCTTGCAGCGGCATAAATTTGGCTTATGGCGATAATAAGAAGGTGATGGG CACGCTGAAGAATATCGGGCAGAACATGCTCGAAAACATCCAGGTGATCGAAACGGCGTT CCAGCAGGACCGCGCGCAGCCCAGCGCCATGGAGAACTTGTCGAACAACATCCTGGGAGG CAAAGGGCAGGTCACCGCGATGGCTGCCCTGACAGAGCTCCGCAAGATCAGCAACCTGCT GCGCGAGATGTGACCCATCCAAGGCGTGTGCAGGCTCCTCCTCCCCCATTCTCACCCCCC CCCCCCCCCCCCCCCCACAAATCATTAGCTCCTCAGAATCAGATAAGCAAGGCCTCCGTA GTTGAAGCCCAGGCACCTAGCCACCCCCCAAACCCCCCTTGTATATATAGACCCCATTCG ATTATTCCATTGAGCCTCTGCTCGGCAGGTATGCTAAGGCTCTCGTTCTTTTTCTTTCTT TCTTGTAACTAAGGATTGGTCAGCTGCTGTCAACTGAGTTGCGGGAGGTGAGGGAGTAAA AAACTCTCTTGTCTCCTGCGTTAGGAGCAACTTTTTGATGGAACAATTTTGGACGCGAAA ATGTCTCTCGAGGTTC