Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031490_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:1:191819277:191824607:-1 gene:Zm00001d031490 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein dnaJ 10

Sequence

ATGGCAGCATATGGAGTTGTTATGTTGAACACTATTGGCTATGTATATTCAAGGCAAGCT
GCAAAAGAACTTGGAAAGAAAGTGATGTTTTTGGGTGTTCCATTTATTGCCGAATGGTTT
AGGGACAAAGGACATTTTATCAAATCCCAAGTAACAGCTGCCACAGGTGCAATAGCTCTT
ATGCAGTTGCAAGATAACTTGACGAAGTATATGAGTGCTGAGGGCCAGTACACAGAGGAG
GAACTTGAAATGTACATGGAAAACCATAAGAAAGTCATGGTTGATTCTCTGTGGAAGCTT
AACGTTGCTGACATAGAAGCCACATTATCCCATGTCTGTCAAATGGTACTTCAAGACAGT
AGTGCCAGAAAGGAGGAATTGCGCCTCCGTGCTAAAGGCTTAAAAACTTTAGGAAGAATT
TTCCAGGGGGCTAAGGTCAACCCTAGCGAGGGGGAAACATCACAAACGAAGAATATAGAC
AACATGGATGGCAATGACGGCAGCTCCCCTGACTCGTCCCCAAATAGAGAGGCACAGTTC
ACTCCTAATCAGCCTCCTGTCCCGAGCCCGTATGTGGAGGCGCCTCATGTTAACGGAGTC
TATTGTCCGTTCCCGATGCCAGCAGCTCCGCCTGGCGCAAGGAGGGATCGAATCCCTTGA

Peptide Sequence

PEP ID

Zm00001d031490_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:1:191819277:191824607:-1 gene:Zm00001d031490 transcript:Zm00001d031490_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein dnaJ 10

Sequence

MAAYGVVMLNTIGYVYSRQAAKELGKKVMFLGVPFIAEWFRDKGHFIKSQVTAATGAIAL
MQLQDNLTKYMSAEGQYTEEELEMYMENHKKVMVDSLWKLNVADIEATLSHVCQMVLQDS
SARKEELRLRAKGLKTLGRIFQGAKVNPSEGETSQTKNIDNMDGNDGSSPDSSPNREAQF
TPNQPPVPSPYVEAPHVNGVYCPFPMPAAPPGARRDRIP

Transcript Sequence

Transcript ID

Zm00001d031490_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:191819277:191824607:-1 gene:Zm00001d031490 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein dnaJ 10

Sequence

CTAGACGACGCGCTTGTGTGCGTGGCCGGACCTGAAAAGCCGGTTCCTCCCCCGACCCCG
GCGCCCCACCGCAGCCGCCGGCTCCCACCGCCCGGCGCACCCCGTCACCTCTCCACCAAC
CGGATACCCGGACGGATCCGCTCCCACCTGGATCCTGATCCGGGGAAGTCAAAGGGGAGA
TCGAAGCTTGAGCAGAGGGAGCCAAAATGGTGAAGGACACGCGGTACTACGACGTGCTGG
GCGTGGACCCGTCCGCCACCGAGTCCGAGATCAAGAAGGCGTACTACGTCAAGGCGAGGC
TGGTCCACCCCGATAAGAACCCGAATGATCCGCAGGCCGCGGAGAAGTTCCAGGTATATG
CGCGCTCGACATTTCTCATCCTGTGGTATCTATACTTTGCTCAGCTTTACAGCGCTGCTG
CGACCTACTCTGCCTCTAGTGTACAATCCTTGATTCGATGGCTCATCTAACAGATGCTGC
TGCGAGCTACTCTGCCTGTAGTGTAGAATGCTCGATTCAATCAGATTAGGTACTCATTGC
TCGATGGCAGTACGTAAAAAAAATTAGGGAGTGCTGACTGCTTGGGCTTACTGGTTTAAA
TGGGGTTTTGTTAAGCAGCTAGACGTATTACTTTTTGGTTGAAGATTGCTCACTTCAAGG
ATACCTCAATATTGCTAACGCCTAACAGAACAGTCAAAACAATCTATTACAGGAAGTATG
TTTACTAGGAATATAGTTCTGAAACACAGTTTGGACGAGTGAACAAAATCTAAATGAGAC
ATATATGTAGGGGTGGTAATAGATCCCGATCCAAATGTTTCTTCACAAAATGGTAGGACT
CTAAATAAATTTTAGTTAAAAAATGAATAGAAATAGGACCCGATCCGATCCTTAAATTTT
ATAGTGTAAAATTTAGAGCCCATTGTCACCCCTACATATATGACACACTCCCCTACCGTT
TGTGTTTTATAATGAAGAGCCACTCGGCCACTCCATATCATTTTTGTAATGCACATTTAG
ATAGCCATTCTTCTTTGTAGCCTACAAAATATTTGGCTGCTGCTTTAAGAATGGAGACAT
TATACATGTATCAAAATGCTAGAGACTTGTCATTTTGTCTTGTTTTTAGAAATAGGATTG
TTCATACTTGAGACTTGTGAATTTCTCAATTTAGGGGTGGTAGTGGATCGCGATCCAAAT
GCTTATTCACAAAATGGTAGGGCTCTAAATAAATTTTAGTTCAAAAATGAATAAAAAATA
GGGCCCGATCCGATCCTTCAATTTTATAGTGTAAAATTTAGAGCCCATTGTCACCCCTAC
ATATATGACACACTCCACTACCGTTTGTGTTTTATACTGAAGAACCACTCCATATCATTT
TTGTAATGCACATTTAGATAGCCATTCTTCTTTTTAGCCTACAAAATATTTGGCTGCTGC
TTTAAGAATGGAGACATTATACATGTATCATAATGCTAGAGACTTGTCATTTTGTCTTGT
TTTTAGAAATAGGATTGCTCATACTTGAGACTTGTGAATTTCTCAATTTCGCAGCAATTT
TCTTTATCCAAATATAAAAAAAATTCGACCTGCGAGGGGTAAGACAGCCCCCGGGCATTA
TATTAAGAAGAAGATCTTCTCACGCGGGTTGAGAAAACCTCCGAATCCTTGCCCCACCCA
TACACAGCGGCACCGTAGCCCATGTGAGAAACGACCGCGACCGGGGCCGGGCCTTAGACC
TGTGCTTTGGCGTGGGACAGACGAGGGGACTTTTTTAACCACGGCCTGAAATTCGTTCCC
ACGGGGAGTCGAACCCAGGACCTGAGGAGTGCTACTCAGACCACCTAACCAACTCGGCTA
GAGGCCCTTCCGCTCTTTATCCAAATATAACATCCTCAATGTAGGTTGAATGCTATTTAA
TTGTTGCATTGAGATAGGCCATTTCACTAGTATGGTGTCTCTGGCTGTGTGCAGGAACAA
TTATGTTGTCATTACTTGTGATTCTAGTGATATTATATGCTGACAAACTGTGATATGCGA
CTCTCTCTCCCTCTATCTGAATATGTGACATAAATGCATGTTTACAGTGAAAGTTTCTGC
ATATCTAATGGACATATCGCGCATTGCTACTGAATGGCTGTATTTACCTTATATGATTCT
TTATGTCCAGTCTTAAAATAAGATTTGGTACCATTACATGACATCACTTTATGAGGAAAG
ATATGGTGCTCTTTCCAAAGTTATGTTTGCAACTTTGCACGCTATTTTGCGCTCAATAGA
ATTTCCATAACAGGAACTAGGAGAAGCATACCAAGTTCTCAGTGACCCTACACAGCGCCA
AGCTTATGACTCACATGGGAAAGACGGCATCTCAACGTACGTTCAGTTACAAACAAATTA
CTTGCTGCCGCTTTTCAATGGAACCGGGGCTTGTTGGAACATGGGAAAGTTTCTTATTTC
TATGTGAATCAAACTGTTTCAAACCAGTCCAGTGCCTTTTTTTGGCACTGCTGCTGCTCT
CAGCAGGAAAATAAAACTTGAAGTGCTACCAAGTGGCATGATTCTGCTGCATCTTATTAG
TAAAACAGAGGCTGTACCAAAAGGGGAGGGTGTTAAGCTCAGAGAGTCAGGATTCATGAT
TAACCATCATGGATATTGTATTTGGAACTTTAGAGAAAATTATATCCCCTGCTGAAGATG
GTATTTTGTTGGATTAACTGGTGATTTCAATCATGCTGCAAATAATCTTATAAGAGAGCA
AAATACTTACTCACATGGTTTCAACGTTCGACAGGGAGGGGATTATTGATCCTGCAACAA
TTTTTGCAATTCTGTTTGGTAGTGAGCTTTTTGAGGAATATATTGGTCAACTGGCAATGG
CATCAATGGCTTCACTTGATAATTTTGGTGAAGATGAGCAGATTGATGCAAGAAAGCTGC
AAGAGAGAATGCAGGCTGTTCAAAAGGATCGGGAAGAAAAACTTGCAGAGACACTGAAAA
ACCGGCTACACATCTATGTGCAAGGAAATAAGGCAGAATTCATCCAGCATGCTGAAGCAG
AGGTGTCCAAACTTAGAAATGCAGGTTTTAGCCATTACTAATCAGCCCTTCTGTCCCTCG
ATGCTAAATATGTTTTTTCTTTTGATTCTATGTTGTCTGTGTTCTTAGTTGGCATATGGT
GTTGAATAAGTTTTTCTTGTCTCTTTTATTTATTATATGGTTCAATATATAGTTAAATAT
CTTGACAAGTATTACTGCATTATATGTCACTCTTAAAACTGCTAACTTTAGTTGAACGTT
GAAACATAGCTGGATATCTGATTTTTTTTACAACCACTTATTGAGTTTCTTCGCCTAAAT
GCTGCAGAAAATACAAGCACAAGAAGCACATTCGAGTTTCTTAATGCCCTCTTAACTAAG
AACTGAAAACAAAGTTTGAAACCGACCTCTTATCTGATGTAAAAAACATAATATCACAGC
TGGCAGATATGCCATTCTCCCTTGTCCCTGAAGTTATGACAGTGTCATAATCCTATGGGA
TTTTTTTGCCAAACCTGTTGTTTAGTGTTATCAGTATGCACTCTTTGTGCGTTTCGGGCT
ATTCTTCTCATCTGTTCATTTCCAGGTAAGAAGTTGTGCTCTGTTAACTGAAGTTTTCCC
CTCTTTTGGTTGTGTTTTGCTTATATGGCAGCATATGGAGTTGTTATGTTGAACACTATT
GGCTATGTATATTCAAGGCAAGCTGCAAAAGAACTTGGAAAGAAAGTGATGTTTTTGGGT
GTTCCATTTATTGCCGAATGGTTTAGGGACAAAGGACATTTTATCAAATCCCAAGTAACA
GCTGCCACAGGTGCAATAGCTCTTATGCAGTTGCAAGATAACTTGACGAAGTATATGAGT
GCTGAGGGCCAGTACACAGAGGAGGAACTTGAAATGTACATGGAAAACCATAAGAAAGTC
ATGGTTGATTCTCTGTGGAAGCTTAACGTTGCTGACATAGAAGCCACATTATCCCATGTC
TGTCAAATGGTACTTCAAGACAGTAGTGCCAGAAAGGAGGAATTGCGCCTCCGTGCTAAA
GGCTTAAAAACTTTAGGAAGAATTTTCCAGGGGGCTAAGGTCAACCCTAGCGAGGGGGAA
ACATCACAAACGAAGAATATAGACAACATGGATGGCAATGACGGCAGCTCCCCTGACTCG
TCCCCAAATAGAGAGGCACAGTTCACTCCTAATCAGCCTCCTGTCCCGAGCCCGTATGTG
GAGGCGCCTCATGTTAACGGAGTCTATTGTCCGTTCCCGATGCCAGCAGCTCCGCCTGGC
GCAAGGAGGGATCGAATCCCTTGAGTCCAGATAAAACCTGCTTGTAAAATGGGCTCTGTT
TAACATTGCCTATAATACTAGATCATTTGCATGATGAACCTGGAGCAGAGGGGAACACAG
GAGTCTGTCAGGTGTTCTCTGCACCTCCCTGTTATTTTGGTCGCGTATGCTTGGTAGCAG
CCGTGTCTTGTGTACAGGTGTGTTTTGCTATTGTTGATCGATGAAGCTGTAGGTGTACAT
GTTATGATGCCCATTATATTATTCTGTTGTCGGCCTGCTGTATTTTAGCATAAACAGTGG
ATACATTTGCATCCATGGGAAATGAAATGTTCTAG