Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031488_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:191775178:191776885:-1 gene:Zm00001d031488 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetraketide alpha-pyrone reductase 1
Sequence

ATGGCTAACACTGCTAAGGGTAAGGTCTGTGTCACTGGGGCGTCTGGTTTCATCGCCTCC
TGGCTCGTCAAGCGGCTTCTTGAGTCTGGGTACCATGTCCTGGGTACAGTCAGAGACCCA
GGGAATGGCAAGAAAGTAGGGCACCTCTGGGGCCTGGAAGGCGCAAAGGAAAGGCTGCAG
CTCGTGAGAGCTGATCTCTTGGAGGAAGGGAGCTTCGACGACGCTGTGATGGCTTGCGAG
GGCGTCTTCCACACCGCATCGCCCGTCGTCACCGGATCTAATTCCAAGGAGGAGATGCTT
GATTCAGCAATAAACGGCACGATGAACGTGCTACGCTCGTGCAAGAAGAACCCATCGCTC
AAGAGGGTTGTCCTGACATCCTCGTCGTCGACAGTGAGGATCAAGGACGAAGCCGACCTG
CCCCCTAACGTGCTGCTGGACGAATCGTCGTGGAGCTCCATCGAGTTCTGCGAAAGTCTC
CAGATATGGTACGCCGTCGCAAAGATCCTCGCCGAGAAGGCAGCCTGGGAGTTCGCCGGA
GAGCACAGGATCGACCTCGTCACCGTTCTTCCGACCTTCGTTGTCGGACCTACTCTGTCT
CCTGAGCTCGGCCCCACCGCTTCTGATGTCCTCGGCCTGTTCCAAGGTACGTCCGCAAAA
GTTTGTGCAAGACCAGAGCCCTCTCGTCAGTCTCATAGACCTTTGTCTTTGTTGCAGGAG
AGACGGGGAAGTTCACGACGTACGGGAGGATGGGGTACGTCCACATCGACGACGTGGCGA
GGTGCCACATGCTGGCGTACGAGGCCGCGGGCGCCCGAGGGAGGTACATCTGCAGCGCGG
CGGTGCTGGACTGCGGCGACCTCGCCGCCCTGCTCGCGCGGCGGTTCCCAGCGTACCCCG
TCCCGAGGAGCCTGCCCCGCGCCTACGGCGAGCAGTCGTACGGCTTCGACACGTCCAAGG
CCCGCGCGCTGGGGCTGGCGGAATTCAAGGGCGTCGAGGAGATGTTCGACGACGCCGTCG
CCTCGTTCATAG

Peptide Sequence

PEP ID

Zm00001d031488_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:191775178:191776885:-1 gene:Zm00001d031488 transcript:Zm00001d031488_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetraketide alpha-pyrone reductase 1
Sequence

MANTAKGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQ
LVRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSKEEMLDSAINGTMNVLRSCKKNPSL
KRVVLTSSSSTVRIKDEADLPPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAG
EHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGTSAKVCARPEPSRQSHRPLSLLQE
RRGSSRRTGGWGTSTSTTWRGATCWRTRPRAPEGGTSAARRCWTAATSPPCSRGGSQRTP
SRGACPAPTASSRTASTRPRPARWGWRNSRASRRCSTTPSPRS

Transcript Sequence

Transcript ID

Zm00001d031488_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:191775178:191776885:-1 gene:Zm00001d031488 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetraketide alpha-pyrone reductase 1
Sequence

GTACTTCAATGTGCACAATATAAACTAGCTGGGATCAAATACAGGAGCACCTCGAGTCTG
AGAGAATGGCTAACACTGCTAAGGGTAAGGTCTGTGTCACTGGGGCGTCTGGTTTCATCG
CCTCCTGGCTCGTCAAGCGGCTTCTTGAGTCTGGGTACCATGTCCTGGGTACAGTCAGAG
ACCCAGGGAATGGCAAGAAAGTAGGGCACCTCTGGGGCCTGGAAGGCGCAAAGGAAAGGC
TGCAGCTCGTGAGAGCTGATCTCTTGGAGGAAGGGAGCTTCGACGACGCTGTGATGGCTT
GCGAGGGCGTCTTCCACACCGCATCGCCCGTCGTCACCGGATCTAATTCCAAGGAGGAGA
TGCTTGATTCAGCAATAAACGGCACGATGAACGTGCTACGCTCGTGCAAGAAGAACCCAT
CGCTCAAGAGGGTTGTCCTGACATCCTCGTCGTCGACAGTGAGGATCAAGGACGAAGCCG
ACCTGCCCCCTAACGTGCTGCTGGACGAATCGTCGTGGAGCTCCATCGAGTTCTGCGAAA
GTCTCCAGATATGGTACGCCGTCGCAAAGATCCTCGCCGAGAAGGCAGCCTGGGAGTTCG
CCGGAGAGCACAGGATCGACCTCGTCACCGTTCTTCCGACCTTCGTTGTCGGACCTACTC
TGTCTCCTGAGCTCGGCCCCACCGCTTCTGATGTCCTCGGCCTGTTCCAAGGTACGTCCG
CAAAAGTTTGTGCAAGACCAGAGCCCTCTCGTCAGTCTCATAGACCTTTGTCTTTGTTGC
AGGAGAGACGGGGAAGTTCACGACGTACGGGAGGATGGGGTACGTCCACATCGACGACGT
GGCGAGGTGCCACATGCTGGCGTACGAGGCCGCGGGCGCCCGAGGGAGGTACATCTGCAG
CGCGGCGGTGCTGGACTGCGGCGACCTCGCCGCCCTGCTCGCGCGGCGGTTCCCAGCGTA
CCCCGTCCCGAGGAGCCTGCCCCGCGCCTACGGCGAGCAGTCGTACGGCTTCGACACGTC
CAAGGCCCGCGCGCTGGGGCTGGCGGAATTCAAGGGCGTCGAGGAGATGTTCGACGACGC
CGTCGCCTCGTTCATAGGCCATGGCCATCTCCCCGCCGCCGAGGAACGCCGGCACGCGTA
GCCTCTTGGTCTGAAACTACATGAATGAACGTATCATGTACTAATTAAATTATTTAATAC
TTTTAACTAGCATCTAATCATGCCGTTTAGTCTTTATCAGTGTGTTTTATTTTTATAGTT
ATATTATATTTAATACTTTTAACTAGCATTTAATTATCTGATGTGATGGACTAAAATTTA
GTCGGTTAGAACCAAACCGACCCTAAATCTTGTCGTAACCAGTAGAAAGATTATCCCATG
GATCGTACGGGTCTATTTGGCCTTTGGTGGTCTAAGCT