Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031484_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:191582443:191584572:1 gene:Zm00001d031484 gene_biotype:protein_coding transcript_biotype:protein_coding description:PsbP domain-containing protein 3 chloroplastic
Sequence

ATGGCTGCCGTGACCAGCACCGCCTCCATCTGCCCGGCCGCAGCCGGCGCCCTCTCTTCG
CTGCCGTCCTTCATCACGCGCAAGCCCACCAGCGGCAGCAGGAGGTTGCAGCAGGCAGCA
GCGACGACAGTCTGCCACTGCCGCTCTGCTCGGGTAGAGGAGGGGCTGCTGGGCCGGAGG
GACGCCTTATTGCTCGGCATCGTCTTCTCCGCCGCGACGCCGCCGCTGCTCGCCCCTGCC
GGCGCTCTGGCGGACGAGGCCACCGCCGAGTCGCAGGAGGGCTTCACTACGTACGAGGAT
GAGGCCAACAAGTTCAGCATTCAAGTTCCGCAAGGCTGGCTGGTCGGCGCCGGCGAGGCC
AGCGGCATCAAGTCTGTCACGGCGTTCTACCCCGAGCAGGCCGCCACCGACTCCAATGTC
AGCGTCGCCATCACCGGGATCGGGCCGGACTTCACCAGCCTCAAGTCCTTCGGCGACGTC
GATGCCTTCGCCGAGGGTCTGGTGAACGGCCTGGACAGGAGCTGGCAGAGGCCGCCGGGG
CTCGCCGCCAAGCTCATCGACTCCAGGGCGGCAAACGGTACTACGGCCTGTACTACCTGG
AGTACACGCTGCAGAACCCCGGCGAGCGACGGCGCCACATCGTCTCGGCCATCGGGATGG
CCTTCAACGGCTGGTACAACCGCCTCTACACTGTGA

Peptide Sequence

PEP ID

Zm00001d031484_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:191582443:191584572:1 gene:Zm00001d031484 transcript:Zm00001d031484_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:PsbP domain-containing protein 3 chloroplastic
Sequence

MAAVTSTASICPAAAGALSSLPSFITRKPTSGSRRLQQAAATTVCHCRSARVEEGLLGRR
DALLLGIVFSAATPPLLAPAGALADEATAESQEGFTTYEDEANKFSIQVPQGWLVGAGEA
SGIKSVTAFYPEQAATDSNVSVAITGIGPDFTSLKSFGDVDAFAEGLVNGLDRSWQRPPG
LAAKLIDSRAANGTTACTTWSTRCRTPASDGATSSRPSGWPSTAGTTASTL

Transcript Sequence

Transcript ID

Zm00001d031484_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:191582443:191584572:1 gene:Zm00001d031484 gene_biotype:protein_coding transcript_biotype:protein_coding description:PsbP domain-containing protein 3 chloroplastic
Sequence

AGACAACGGCGAGCCAACCACCACCAGCGTCCCGCGCTAGCTGCGGCACCGCATGGCTGC
CGTGACCAGCACCGCCTCCATCTGCCCGGCCGCAGCCGGCGCCCTCTCTTCGCTGCCGTC
CTTCATCACGCGCAAGCCCACCAGCGGCAGCAGGAGGTTGCAGCAGGCAGCAGCGACGAC
AGTCTGCCACTGCCGCTCTGCTCGGGTAGAGGAGGGGCTGCTGGGCCGGAGGGACGCCTT
ATTGCTCGGCATCGTCTTCTCCGCCGCGACGCCGCCGCTGCTCGCCCCTGCCGGCGCTCT
GGCGGACGAGGCCACCGCCGAGTCGCAGGAGGGCTTCACTACGTACGAGGATGAGGCCAA
CAAGTTCAGCATTCAAGTTCCGCAAGGCTGGCTGGTCGGCGCCGGCGAGGCCAGCGGCAT
CAAGTCTGTCACGGCGTTCTACCCCGAGCAGGCCGCCACCGACTCCAATGTCAGCGTCGC
CATCACCGGGATCGGGCCGGACTTCACCAGCCTCAAGTCCTTCGGCGACGTCGATGCCTT
CGCCGAGGGTCTGGTGAACGGCCTGGACAGGAGCTGGCAGAGGCCGCCGGGGCTCGCCGC
CAAGCTCATCGACTCCAGGGCGGCAAACGGTACTACGGCCTGTACTACCTGGAGTACACG
CTGCAGAACCCCGGCGAGCGACGGCGCCACATCGTCTCGGCCATCGGGATGGCCTTCAAC
GGCTGGTACAACCGCCTCTACACTGTGACGGGCCAGTACATCGACGACGATGACTCGGAG
AAGTACAGGCCTCAGATAGAGAAGGCTGTTGGATCGTTCAGGCTGACATGAAAGATGCGA
TGTCATCCAGCACCAGCAGCAGCAGCCGCCCACGGTACATAAACCCTAAATATGTATGCG
GAGAGGTCCAGCAACATGTTGTGCCCGAAAATTGACACCTTGCCATTTCGATGAGACAAG
ACAAGGCATGTGCCTATTGCCCTATTCCAATTCTTGAGCACTGTAACACTGCCAATATGC
AGAGTATATGTTTTCTGCCTGTTGAGGTGGATACAAATGCATGCTTTTTTTTTATTAATA
ACTCATGTGTAACACTGCTGCCTTTTTTATTCTCTTTTCAAGGCAAATGCCCT