Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031449_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:190319307:190321767:1 gene:Zm00001d031449 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase13 description:Lipoxygenase 2 chloroplastic
Sequence	ATGTCTGCCAAGGACCCAAGCACGGAGACGAGGAGCGGCGACAACTACGTGCCGAGGGAC GAGGCGTTCTCGGAGGTGAAGAACCTGCAGTTCTCCGTGACCACGCTGCGCTCGGTGCTC CACGCCGCCGTGCCGGCGGTGCAGTCCACGCTCATCGACCCCAACCTCGCGTTCCCGTCC TTCTTCGTCATCGACAAGCTGTTCGAGGACGGCGTCGAGCTGCCCAAGGCCGACCAGCTG GGCTTCCTCCGCAGCGTCGTGCCTCGCCTGCTCCAGCTCCTCCGCGACAGGCCCGCCAAT GTCCAGAAGGACAAGTTTGCGTGGCTGAGGGACGAGGAGTTCGCGAGGGAGACGCTTGCC GGGATGAACCCGTACGCGATCGAGCTCGTCAGAGAGTTCCCTTTGAAGAGCAAGCTGGAC CCGGCGGTGTACGGACAGGCGGAATCAGCGATCACGGCGGAGGTGCTGGAGCGGCAGATG GGGCGGGTGATGACGGTGGCGGAGGCGGTGTCGCAGAAGCGGCTCTTCATGCTGGACTAC CACGACCTGTTCCTCCCATACGTGCACAGGATCCGGGCGCAGGCGCACACCACCATGTAT GGCTCGCGCACCATCTTCTTCCTGTGCAACGATGGAACGCTGCGGCTGCTGGCCATCGAG CTGACGCGGCCGGCGTCACCGACGCAGCCGCAGTGGCGCCGGGTGTTCACCTCGTCGACG GACACCACCGAGTCGTGGCTGTGGCGGATGGCCAAGTCGCACGTGCGCGCGCACGACTCG GGCCACCACGAGCTCATCTCCCACTGGCTGCGCACGCACTGCGCCGTGGAGCCCTACATC ATCGCGGCCAACCGGCAGCTGAGCGAGATGCACCCGGTGTACCAGCTGCTGCACCCGCAC TTCCGCTACACCATGCGGATCAACGCGCTGGCGCGGTCGGCGCTTATCAACGCCGGCGGC ATCATCGAGCTCTCCTTCTCGCCGCAGAGGTACGCCATAGAGCTCAGCTCCGTGGCGTAC GACAAGCTCTGGCGCTTCGACACGGAGGCGCTCCCCGCAGACCTCGTCCGCAGGGGGATG GCCGTGGAGGACCCCGCCGCGGAGCACGGGCTCAGGCTCACGATCCCGGACTACCCGTTC GCCAACGATGGCCTGCTCGTCTGGGACGCCATCAAGGGCTGGGTGACGGCGTACGTCGCC CGGTTCTACCCGGACGCCAGCACCCTCGCCGGCGACGCGGAGCTGCAGGCGTTCTGGACG GACGTGCGCACCGTGGGGCACGGCGACAAGAAGGACGCGCCAGGGTGGCCGGCGCTTGAC TCGCCGGACAGCCTGGCGCACGCGCTGACCACCATCATCTGGGTCGCGTCGGCGCACCAC GCCGCCGTCAACTTCGGGCAGTACGACTTCGCGGGTTACTTCCCCAACCGGCCGTCCATC GCGCGCACCAACATGCCGGTGGAGGAGCCCGTCGACGCCACCGCGCTCGCGGCGTTCCTG GACAACCCGGACCAGGCGCTCCGCGAGTGCTTCCCGTCGCAGGTGCAGGCGACGCTGGTG ATGGCCGTGCTGGACCTGCTGTCCACGCACTCCCCCGACGAGGAGTACCTGGGCGGGATG GAGACCGCGCCGTGGAACGACGATGCCACGGTGCAGGATGCGTACGGCAAGTTCAACGCG CGGCTCAAGGAGATCGAGGGCATCATGGACGAGAGGAACAAGGACCGCAGGCTCAAGAAC CGGTGCGGCGCCGGCATTTTGCCGTACCAGCTCATGAAGCCCTTCTCTCAGCCCGGTGTC ACAGGGATGGGCATCCCTAACAGCACGTCCATCTGA

Peptide Sequence

PEP ID	Zm00001d031449_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:190319307:190321767:1 gene:Zm00001d031449 transcript:Zm00001d031449_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase13 description:Lipoxygenase 2 chloroplastic
Sequence	MSAKDPSTETRSGDNYVPRDEAFSEVKNLQFSVTTLRSVLHAAVPAVQSTLIDPNLAFPS FFVIDKLFEDGVELPKADQLGFLRSVVPRLLQLLRDRPANVQKDKFAWLRDEEFARETLA GMNPYAIELVREFPLKSKLDPAVYGQAESAITAEVLERQMGRVMTVAEAVSQKRLFMLDY HDLFLPYVHRIRAQAHTTMYGSRTIFFLCNDGTLRLLAIELTRPASPTQPQWRRVFTSST DTTESWLWRMAKSHVRAHDSGHHELISHWLRTHCAVEPYIIAANRQLSEMHPVYQLLHPH FRYTMRINALARSALINAGGIIELSFSPQRYAIELSSVAYDKLWRFDTEALPADLVRRGM AVEDPAAEHGLRLTIPDYPFANDGLLVWDAIKGWVTAYVARFYPDASTLAGDAELQAFWT DVRTVGHGDKKDAPGWPALDSPDSLAHALTTIIWVASAHHAAVNFGQYDFAGYFPNRPSI ARTNMPVEEPVDATALAAFLDNPDQALRECFPSQVQATLVMAVLDLLSTHSPDEEYLGGM ETAPWNDDATVQDAYGKFNARLKEIEGIMDERNKDRRLKNRCGAGILPYQLMKPFSQPGV TGMGIPNSTSI

Transcript Sequence

Transcript ID	Zm00001d031449_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:190319307:190321767:1 gene:Zm00001d031449 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase13 description:Lipoxygenase 2 chloroplastic
Sequence	GGGGCAGACGCCGCCGGGGCTCCGGAGCTACCGGAGCAAGGACCTGGAGGAGAAGCGCGG CGACGGGCGCGGCGAGCGGAAGCCCAGCGACCGCATCTACGACTACGCCACTTACAACGA CCTGGGCGACCCCGACAGCGACGCCGCCAAGGCGCGGCCCGTCCTGGGCGGCAGCGCGCA GTTCCCCTACCCGCGGCGGTGCCGCACGGGCCGCCCGATGTCTGCCAAGGACCCAAGCAC GGAGACGAGGAGCGGCGACAACTACGTGCCGAGGGACGAGGCGTTCTCGGAGGTGAAGAA CCTGCAGTTCTCCGTGACCACGCTGCGCTCGGTGCTCCACGCCGCCGTGCCGGCGGTGCA GTCCACGCTCATCGACCCCAACCTCGCGTTCCCGTCCTTCTTCGTCATCGACAAGCTGTT CGAGGACGGCGTCGAGCTGCCCAAGGCCGACCAGCTGGGCTTCCTCCGCAGCGTCGTGCC TCGCCTGCTCCAGCTCCTCCGCGACAGGCCCGCCAATGTCCAGAAGGACAAGTTTGCGTG GCTGAGGGACGAGGAGTTCGCGAGGGAGACGCTTGCCGGGATGAACCCGTACGCGATCGA GCTCGTCAGAGAGTTCCCTTTGAAGAGCAAGCTGGACCCGGCGGTGTACGGACAGGCGGA ATCAGCGATCACGGCGGAGGTGCTGGAGCGGCAGATGGGGCGGGTGATGACGGTGGCGGA GGCGGTGTCGCAGAAGCGGCTCTTCATGCTGGACTACCACGACCTGTTCCTCCCATACGT GCACAGGATCCGGGCGCAGGCGCACACCACCATGTATGGCTCGCGCACCATCTTCTTCCT GTGCAACGATGGAACGCTGCGGCTGCTGGCCATCGAGCTGACGCGGCCGGCGTCACCGAC GCAGCCGCAGTGGCGCCGGGTGTTCACCTCGTCGACGGACACCACCGAGTCGTGGCTGTG GCGGATGGCCAAGTCGCACGTGCGCGCGCACGACTCGGGCCACCACGAGCTCATCTCCCA CTGGCTGCGCACGCACTGCGCCGTGGAGCCCTACATCATCGCGGCCAACCGGCAGCTGAG CGAGATGCACCCGGTGTACCAGCTGCTGCACCCGCACTTCCGCTACACCATGCGGATCAA CGCGCTGGCGCGGTCGGCGCTTATCAACGCCGGCGGCATCATCGAGCTCTCCTTCTCGCC GCAGAGGTACGCCATAGAGCTCAGCTCCGTGGCGTACGACAAGCTCTGGCGCTTCGACAC GGAGGCGCTCCCCGCAGACCTCGTCCGCAGGGGGATGGCCGTGGAGGACCCCGCCGCGGA GCACGGGCTCAGGCTCACGATCCCGGACTACCCGTTCGCCAACGATGGCCTGCTCGTCTG GGACGCCATCAAGGGCTGGGTGACGGCGTACGTCGCCCGGTTCTACCCGGACGCCAGCAC CCTCGCCGGCGACGCGGAGCTGCAGGCGTTCTGGACGGACGTGCGCACCGTGGGGCACGG CGACAAGAAGGACGCGCCAGGGTGGCCGGCGCTTGACTCGCCGGACAGCCTGGCGCACGC GCTGACCACCATCATCTGGGTCGCGTCGGCGCACCACGCCGCCGTCAACTTCGGGCAGTA CGACTTCGCGGGTTACTTCCCCAACCGGCCGTCCATCGCGCGCACCAACATGCCGGTGGA GGAGCCCGTCGACGCCACCGCGCTCGCGGCGTTCCTGGACAACCCGGACCAGGCGCTCCG CGAGTGCTTCCCGTCGCAGGTGCAGGCGACGCTGGTGATGGCCGTGCTGGACCTGCTGTC CACGCACTCCCCCGACGAGGAGTACCTGGGCGGGATGGAGACCGCGCCGTGGAACGACGA TGCCACGGTGCAGGATGCGTACGGCAAGTTCAACGCGCGGCTCAAGGAGATCGAGGGCAT CATGGACGAGAGGAACAAGGACCGCAGGCTCAAGAACCGGTGCGGCGCCGGCATTTTGCC GTACCAGCTCATGAAGCCCTTCTCTCAGCCCGGTGTCACAGGGATGGGCATCCCTAACAG CACGTCCATCTGATGATCCTTGTTGACTCCTCACTATTTAATTTTACCTCGGTACGGTGT CTAGTGGAATTATTTATTCATCAATGTAACGGTAACGGTAATGTAATAATGGCATAAACT TACTTCGGCCGGTG