Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031346_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:187013825:187014620:1 gene:Zm00001d031346 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:php20682 description:Jasmonate-induced protein

Sequence

ATGGCACATCCTGCTAGCCATGCCCGCCTGACCACCACCATCCTCTTCATGTCGCATCTG
CTGGTCTTGGCTACTGCTTCACTGGGATACCCATGCCCATGCCCCTACACCTGCGAGAAC
GAGCTGAACTGGCGCCTGTATCTGAAGCAAGTTGCCGGTGCTGGACCAGACCACAACCAG
GAGGTAATTTTCAGACCCCAGCACGCTAGTCCGTTCGGCGTGACTGCCGTTCAGGACTGG
ACGTTACTAGACGCGCCTGCTCCAGGCGCAAAGGTGTTAGGGCACGCGCAAGGCGTGCAT
ATCATGTCTGATCTAGCCAGCGTGGGCTGGTTCGTCTCCCTCAACATGGTGTTCCAAGGT
GACAGGTTTAGCGGATCTACACTCCAGGTGATGGGAGTCATTCCACCGGAGGGGGAGTGG
GCTGTCGTGGGAGGGACAGGAGAACTGGCTCTGGCACGCGGCACGATCAAGCACAGAATA
GTTGGAGGCGCGCCCGAGACCAACTTCCGGCAGCTGGATATCCACGCCTTCTACGCGAAC
GGCTCAGCCAGCTGCGTCGTAGGTACATCTCTTCACTCCTGTTCCAAACTTCCAGCGGTC
TAG

Peptide Sequence

PEP ID

Zm00001d031346_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:187013825:187014620:1 gene:Zm00001d031346 transcript:Zm00001d031346_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:php20682 description:Jasmonate-induced protein

Sequence

MAHPASHARLTTTILFMSHLLVLATASLGYPCPCPYTCENELNWRLYLKQVAGAGPDHNQ
EVIFRPQHASPFGVTAVQDWTLLDAPAPGAKVLGHAQGVHIMSDLASVGWFVSLNMVFQG
DRFSGSTLQVMGVIPPEGEWAVVGGTGELALARGTIKHRIVGGAPETNFRQLDIHAFYAN
GSASCVVGTSLHSCSKLPAV

Transcript Sequence

Transcript ID

Zm00001d031346_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:187013825:187014620:1 gene:Zm00001d031346 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:php20682 description:Jasmonate-induced protein

Sequence

CAGCAGTCACACGAAGACAGCAAGCTAAACACTTGCACTCTGTCGTCTCCTTCCCGAGCC
AACAAATCCTTTTGCCAATGGCACATCCTGCTAGCCATGCCCGCCTGACCACCACCATCC
TCTTCATGTCGCATCTGCTGGTCTTGGCTACTGCTTCACTGGGATACCCATGCCCATGCC
CCTACACCTGCGAGAACGAGCTGAACTGGCGCCTGTATCTGAAGCAAGTTGCCGGTGCTG
GACCAGACCACAACCAGGAGGTAATTTTCAGACCCCAGCACGCTAGTCCGTTCGGCGTGA
CTGCCGTTCAGGACTGGACGTTACTAGACGCGCCTGCTCCAGGCGCAAAGGTGTTAGGGC
ACGCGCAAGGCGTGCATATCATGTCTGATCTAGCCAGCGTGGGCTGGTTCGTCTCCCTCA
ACATGGTGTTCCAAGGTGACAGGTTTAGCGGATCTACACTCCAGGTGATGGGAGTCATTC
CACCGGAGGGGGAGTGGGCTGTCGTGGGAGGGACAGGAGAACTGGCTCTGGCACGCGGCA
CGATCAAGCACAGAATAGTTGGAGGCGCGCCCGAGACCAACTTCCGGCAGCTGGATATCC
ACGCCTTCTACGCGAACGGCTCAGCCAGCTGCGTCGTAGGTACATCTCTTCACTCCTGTT
CCAAACTTCCAGCGGTCTAG