Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031329_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:1:186195042:186199511:-1 gene:Zm00001d031329 gene_biotype:protein_coding transcript_biotype:protein_coding description:Catalytic/ protein phosphatase type 2C
Sequence	ATGGGCTCCTGCCTCTCCTCCGAGGCCCCCGCCGCCGGCGATGGCCCAGCGGCGTGGCGG AAGCGGCGCCACGGGAGCCGGGAGGGCGCGGCCGCCGGCGCCGGCGCCGCCGGCGGCGGT GGGAAGAAGCTGCCCGGAGGAGCGGGGGAGATGACGGAGGACGAGCTCGCGCGGGTCCCC GGGAGGTTGTGCGGCAAAGGCGCCAGCGCGGTGGCGTGCCTCCACACGCAGCAGGGCCGG AAGGGCACCAACCAGGACGCCATGGTCGTGTGGGAGAGTTTTAATTCAAGCGACAGCATC TTCTGTGGTGTGTTTGATGGCCATGGGCCATACGGTCATTTTGTTGCAAAGAAAGTTAGA GATTCACTTCCTGTCAAGTTGCGCACACAATGGCAAACTAGTGCTAATGGGGGCTCTAGT CCTCATCAAAATGGAAGCATCAACTCCGAAGAAACAGGGTCTATTGTTGACGATGAATGG GGTGATGGTGATGACACTGAAAAGCTCCCTGAGATGTTTCTTCCACTGAAGCAATCTTAC CTAAAAGCTTTCAAATTGATGGACAAGGAACTCAAGCTGCATCCCACAGTTGACTGTTTC TGCAGTGGATCTACGGCAGTAACATTGGTGAAACAGGGATTGGACCTTGTAATCGGAAAT CTTGGGGACTCAAGAGCAATTATGGGGACAAGAGACGCCTCTAACAATCTAACTGCTCTG CAACTCACAGTTGATTTGAAGCCTAACCTTCCCAGGGAAGCTGCGAGGATACAACAATGT AAAGGACGGGTCTTTGCTCTTCAGGATGAGCCAGAAGTTGCCAGGGTATGGTTGCCAAAT AATGACTCTCCTGGATTGGCAATGGCAAGAGCCTTCGGGGACTTCTGCCTTAAAGATTAT GGTTTAATATCTGTTCCAGAGATATCATATCGCCGCCTTACCGAAAAGGATGAATTTATA ATACTAGCCACCGATGGGGTATGGGATGTTCTCTCAAATAAGGAGGCTGTCGACATAGTA GCATCAGCCCCATCTCGTGCGACAGCAGCCAGGGCCCTTGTTGACTGTGCTGTCAGGTCA TGGAGGTTGAAGTTCCCAACATCCAAGAGCGATGACTGTGCTGTTGTCTGCTTATTCTTG GGTCACGAGAAGTCGGCCGACTCGGTTCAAGGGAGTGAACCCAATGTGGAGACAGCAGAA CCCACCGTGGAGGTTTCCAGTTCCACACAGGATTCCAGTGCAGGGGTTGACGAAGACATT GCAGATGCTGGCATGCATGTATCTAGTGCAGTGCACATTTCCGAGGCCACGCTGCAGCAC TCCACCACGTTAAGGGAGGTCGACGAGATTGTACCGGTCGACGAACCTACAGCCTCGAAG GAGCCTGGAAGGTGCGGGTCTGCTCGCAGCCTGGCAGATTGCATATCGACAAACGAGGAA GAGGAATGGTCCGCGCTCGAAGGCGTGACACGGGTGAATTCCCTCCTGAACCTCCCTAGA CTACTGTCGGGCGACAAGCGATCGACCAGCTGGAGGAAGCGGCGGTGA

Peptide Sequence

PEP ID	Zm00001d031329_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:1:186195042:186199511:-1 gene:Zm00001d031329 transcript:Zm00001d031329_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Catalytic/ protein phosphatase type 2C
Sequence	MGSCLSSEAPAAGDGPAAWRKRRHGSREGAAAGAGAAGGGGKKLPGGAGEMTEDELARVP GRLCGKGASAVACLHTQQGRKGTNQDAMVVWESFNSSDSIFCGVFDGHGPYGHFVAKKVR DSLPVKLRTQWQTSANGGSSPHQNGSINSEETGSIVDDEWGDGDDTEKLPEMFLPLKQSY LKAFKLMDKELKLHPTVDCFCSGSTAVTLVKQGLDLVIGNLGDSRAIMGTRDASNNLTAL QLTVDLKPNLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDY GLISVPEISYRRLTEKDEFIILATDGVWDVLSNKEAVDIVASAPSRATAARALVDCAVRS WRLKFPTSKSDDCAVVCLFLGHEKSADSVQGSEPNVETAEPTVEVSSSTQDSSAGVDEDI ADAGMHVSSAVHISEATLQHSTTLREVDEIVPVDEPTASKEPGRCGSARSLADCISTNEE EEWSALEGVTRVNSLLNLPRLLSGDKRSTSWRKRR

Transcript Sequence

Transcript ID	Zm00001d031329_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:186195042:186199511:-1 gene:Zm00001d031329 gene_biotype:protein_coding transcript_biotype:protein_coding description:Catalytic/ protein phosphatase type 2C
Sequence	AAATCTCGAGCATCATCAGAACAGTTTGCAGACAGACAGGCAGGCAGCGGCAGTTACCAC CGCCACCTCCACCCTGTGCTCCACCGTGTCGCTTCCCTCCCGTTGGCCGTCATGGGCTCC TGCCTCTCCTCCGAGGCCCCCGCCGCCGGCGATGGCCCAGCGGCGTGGCGGAAGCGGCGC CACGGGAGCCGGGAGGGCGCGGCCGCCGGCGCCGGCGCCGCCGGCGGCGGTGGGAAGAAG CTGCCCGGAGGAGCGGGGGAGATGACGGAGGACGAGCTCGCGCGGGTCCCCGGGAGGTTG TGCGGCAAAGGCGCCAGCGCGGTGGCGTGCCTCCACACGCAGCAGGGCCGGAAGGGCACC AACCAGGACGCCATGGTCGTGTGGGAGAGTTTTAATTCAAGCGACAGCATCTTCTGTGGT GTGTTTGATGGCCATGGGCCATACGGTCATTTTGTTGCAAAGAAAGTTAGAGATTCACTT CCTGTCAAGTTGCGCACACAATGGCAAACTAGTGCTAATGGGGGCTCTAGTCCTCATCAA AATGGAAGCATCAACTCCGAAGAAACAGGGTCTATTGTTGACGATGAATGGGGTGATGGT GATGACACTGAAAAGCTCCCTGAGATGTTTCTTCCACTGAAGCAATCTTACCTAAAAGCT TTCAAATTGATGGACAAGGAACTCAAGCTGCATCCCACAGTTGACTGTTTCTGCAGTGGA TCTACGGCAGTAACATTGGTGAAACAGGGATTGGACCTTGTAATCGGAAATCTTGGGGAC TCAAGAGCAATTATGGGGACAAGAGACGCCTCTAACAATCTAACTGCTCTGCAACTCACA GTTGATTTGAAGCCTAACCTTCCCAGGGAAGCTGCGAGGATACAACAATGTAAAGGACGG GTCTTTGCTCTTCAGGATGAGCCAGAAGTTGCCAGGGTATGGTTGCCAAATAATGACTCT CCTGGATTGGCAATGGCAAGAGCCTTCGGGGACTTCTGCCTTAAAGATTATGGTTTAATA TCTGTTCCAGAGATATCATATCGCCGCCTTACCGAAAAGGATGAATTTATAATACTAGCC ACCGATGGGGTATGGGATGTTCTCTCAAATAAGGAGGCTGTCGACATAGTAGCATCAGCC CCATCTCGTGCGACAGCAGCCAGGGCCCTTGTTGACTGTGCTGTCAGGTCATGGAGGTTG AAGTTCCCAACATCCAAGAGCGATGACTGTGCTGTTGTCTGCTTATTCTTGGGTCACGAG AAGTCGGCCGACTCGGTTCAAGGGAGTGAACCCAATGTGGAGACAGCAGAACCCACCGTG GAGGTTTCCAGTTCCACACAGGATTCCAGTGCAGGGGTTGACGAAGACATTGCAGATGCT GGCATGCATGTATCTAGTGCAGTGCACATTTCCGAGGCCACGCTGCAGCACTCCACCACG TTAAGGGAGGTCGACGAGATTGTACCGGTCGACGAACCTACAGCCTCGAAGGAGCCTGGA AGGTGCGGGTCTGCTCGCAGCCTGGCAGATTGCATATCGACAAACGAGGAAGAGGAATGG TCCGCGCTCGAAGGCGTGACACGGGTGAATTCCCTCCTGAACCTCCCTAGACTACTGTCG GGCGACAAGCGATCGACCAGCTGGAGGAAGCGGCGGTGACCGGTGAGGAAGCTCTCCTAC AATTCTTTGCCGAGTTCAGGTGGGGGTTCATGCAGAGGCGCGTGCAAAATCCTTTAG