Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031328_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:186081296:186085558:-1 gene:Zm00001d031328 gene_biotype:protein_coding transcript_biotype:protein_coding description:CBF1-interacting co-repressor CIR N-terminal;Pre-mRNA splicing factor
Sequence	ATGGCGCTCAAGTTCCTGAACAAGAAGGGATGGCACACGGGGTCCCTCCGCAACATCGAG CGGGTATGGAAGGCGGAGCAGGCGGAGGAGGCGGAGCGCCGCAAGACGGAGGAGCTCAAG AAGCAGGTCGCGGCCGAGAGGGAGAAGGCCGAGTTCCGGGCCATGCAGGAGCGCGCCGGC CTCAGGCCGGCGCAGGAGAGGCTCGACTTCCTCTACGAGTCGGGGTTGGCCGTCGGCAAG AGCTCCGAAGGGTTCCAGGCGCTGCAGCAATCTGCACCGGGGGCAGCTGCCGCGTCCACT TCTGCACAGGCGAGTGCGGCTGATTCTTCCAAGGCAGCTACACCGGGAGCTTTATTTGAG GATAAACCCCAATCTGCAAATGATACATGGAGAAAACTCCACTCTGATCCTCTACTCCTA ATAAGGCAGCGGGAGCAGGATGCGATTTCAAGGATTAAAAACAATCCAATCAAGATGGCC GAGATAAAGAAATCTGTTGAAGCTGAGAAAAAGCAAAAAGAAGAGAAGAAAGCGAAGAAA AAGCACAAGAAGCATCACCACCATAAGTCAAAGAGTAAGAGGCATCACTCAGATGAGAAT TCTGATTCAGATGAAATAAGTGATGGCAAAGATGAGAGAAGGAAGAGGTCTCATTCTTCT CTTCATAAGAAAGAAGAGAACATGTCCAGGCATAAGAAGCAGCACAGAGAAGATTCATCA GATTCAGACGATGAACCGCAGAGAAGAAAGCAGGATGTATCAGAAAATGATGAACCGAGG AGAAGACTACATGACGACAATGAACCGAGGAGAAGATGGCAGGATGACGTTGAACCGAGG AGAAGACTGCATGACGACGATGAACCGAGAAGATGGCAGGATGACGTTGAACCGAGGAGA AGAAGACAGGATGATGGTGAATCAAGGAGAAGATGGCAGGACGACGATGAACTAAGGGGA AGACGGCAGGTTGATGAGAAACCAAGGGAAAGAAGCTACGTTAATCGTCCAAGATATGAC CGCTCTGACGCTGATGATAGGAGGAGACACCATTCACCTCGAGACACTAAGCCCAAAAGA GTGGATGATGGCCACAAAACTGGAAATTCCACTTCTGAACACCATTCCCGCTCTGAACAA GGCTCTGGCGAGCAGACAAGGCAAGAGAGCGAACATGACAGGAATAGTGGTCCTTCATTG AACCGACGACGCGGTGGTGTCCACCATATGTCAGAAGAGGAGAGGTTAGCTCGTCTGCAC CAGATGCAGGCTGACGCTGAGGTCCACGAGGAGCAGAGATGGAAGAGGCTCAAGAAAGCT GCAGACGACGATGCTAAAGAGGCAACAACTGTGAATGCAAACCAGTTCAAAGGGAAGAAC TTCTTGGAAGATGAAAAGAAGAGCATATTTGGAACAGATAAGGGTGGCAGTGCCACGATT GAAGAGAGCATCAGGCGCCGCGCTTTCTACTCGCAGGGTGGGCGTGATGCCGAGGGCAAT GCCTTCAGGCGGTGA

Peptide Sequence

PEP ID	Zm00001d031328_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:186081296:186085558:-1 gene:Zm00001d031328 transcript:Zm00001d031328_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CBF1-interacting co-repressor CIR N-terminal;Pre-mRNA splicing factor
Sequence	MALKFLNKKGWHTGSLRNIERVWKAEQAEEAERRKTEELKKQVAAEREKAEFRAMQERAG LRPAQERLDFLYESGLAVGKSSEGFQALQQSAPGAAAASTSAQASAADSSKAATPGALFE DKPQSANDTWRKLHSDPLLLIRQREQDAISRIKNNPIKMAEIKKSVEAEKKQKEEKKAKK KHKKHHHHKSKSKRHHSDENSDSDEISDGKDERRKRSHSSLHKKEENMSRHKKQHREDSS DSDDEPQRRKQDVSENDEPRRRLHDDNEPRRRWQDDVEPRRRLHDDDEPRRWQDDVEPRR RRQDDGESRRRWQDDDELRGRRQVDEKPRERSYVNRPRYDRSDADDRRRHHSPRDTKPKR VDDGHKTGNSTSEHHSRSEQGSGEQTRQESEHDRNSGPSLNRRRGGVHHMSEEERLARLH QMQADAEVHEEQRWKRLKKAADDDAKEATTVNANQFKGKNFLEDEKKSIFGTDKGGSATI EESIRRRAFYSQGGRDAEGNAFRR

Transcript Sequence

Transcript ID	Zm00001d031328_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:186081296:186085558:-1 gene:Zm00001d031328 gene_biotype:protein_coding transcript_biotype:protein_coding description:CBF1-interacting co-repressor CIR N-terminal;Pre-mRNA splicing factor
Sequence	ACACAAAAAGAAACGAGTCGTGGGCTCGTGGCCGAGTCGGGGCCTCGATCTGACCTTCTC TTCAATCGCATCCGCCCGCGTCGTCTCGTCACCCCCGTTGTGGTCGCCTGGGAAGAGGAG GGAGGCCAGCTTGCCGCTAGGGTTAGGGTTTCGGGCGGGAGGGACAGAGGCGGGGCTGCA GCCATGGCGCTCAAGTTCCTGAACAAGAAGGGATGGCACACGGGGTCCCTCCGCAACATC GAGCGGGTATGGAAGGCGGAGCAGGCGGAGGAGGCGGAGCGCCGCAAGACGGAGGAGCTC AAGAAGCAGGTCGCGGCCGAGAGGGAGAAGGCCGAGTTCCGGGCCATGCAGGAGCGCGCC GGCCTCAGGCCGGCGCAGGAGAGGCTCGACTTCCTCTACGAGTCGGGGTTGGCCGTCGGC AAGAGCTCCGAAGGGTTCCAGGCGCTGCAGCAATCTGCACCGGGGGCAGCTGCCGCGTCC ACTTCTGCACAGGCGAGTGCGGCTGATTCTTCCAAGGCAGCTACACCGGGAGCTTTATTT GAGGATAAACCCCAATCTGCAAATGATACATGGAGAAAACTCCACTCTGATCCTCTACTC CTAATAAGGCAGCGGGAGCAGGATGCGATTTCAAGGATTAAAAACAATCCAATCAAGATG GCCGAGATAAAGAAATCTGTTGAAGCTGAGAAAAAGCAAAAAGAAGAGAAGAAAGCGAAG AAAAAGCACAAGAAGCATCACCACCATAAGTCAAAGAGTAAGAGGCATCACTCAGATGAG AATTCTGATTCAGATGAAATAAGTGATGGCAAAGATGAGAGAAGGAAGAGGTCTCATTCT TCTCTTCATAAGAAAGAAGAGAACATGTCCAGGCATAAGAAGCAGCACAGAGAAGATTCA TCAGATTCAGACGATGAACCGCAGAGAAGAAAGCAGGATGTATCAGAAAATGATGAACCG AGGAGAAGACTACATGACGACAATGAACCGAGGAGAAGATGGCAGGATGACGTTGAACCG AGGAGAAGACTGCATGACGACGATGAACCGAGAAGATGGCAGGATGACGTTGAACCGAGG AGAAGAAGACAGGATGATGGTGAATCAAGGAGAAGATGGCAGGACGACGATGAACTAAGG GGAAGACGGCAGGTTGATGAGAAACCAAGGGAAAGAAGCTACGTTAATCGTCCAAGATAT GACCGCTCTGACGCTGATGATAGGAGGAGACACCATTCACCTCGAGACACTAAGCCCAAA AGAGTGGATGATGGCCACAAAACTGGAAATTCCACTTCTGAACACCATTCCCGCTCTGAA CAAGGCTCTGGCGAGCAGACAAGGCAAGAGAGCGAACATGACAGGAATAGTGGTCCTTCA TTGAACCGACGACGCGGTGGTGTCCACCATATGTCAGAAGAGGAGAGGTTAGCTCGTCTG CACCAGATGCAGGCTGACGCTGAGGTCCACGAGGAGCAGAGATGGAAGAGGCTCAAGAAA GCTGCAGACGACGATGCTAAAGAGGCAACAACTGTGAATGCAAACCAGTTCAAAGGGAAG AACTTCTTGGAAGATGAAAAGAAGAGCATATTTGGAACAGATAAGGGTGGCAGTGCCACG ATTGAAGAGAGCATCAGGCGCCGCGCTTTCTACTCGCAGGGTGGGCGTGATGCCGAGGGC AATGCCTTCAGGCGGTGAATATATTGTTTTGTTGTTTGCTGCCTTGTTGGACTCATCTTG CCGTCGTGTTCGTTTTATTATTGTACGTGAAAGTTGAGAACTATGTACAACAATTTCTCA ATAACAGCAATTTTATATGCAACTTCAAATTTTTGATACAGAATTTGGCCTAAACTGCAC CGAAGAGTGATTGCCTC