Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031312_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:185850815:185852753:1 gene:Zm00001d031312 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BURP domain-containing protein-RD22-like6 description:RAFTIN1a protein
Sequence	ATGGCGCGCTTCGCCTCCGCTGTCCTCTTCGCCGCTGTCCTGCTCATGGCTGGACGGCTG ACCCATGCGGGGCCGTCGACGGCCGAGGTGCTTTGGCGGCGCGCAGTCCTGCCGGGCTCC GCCGTGCCGAACGCCGTCCTCCGGCTCCTACGCCCCTATAGCCACTTCGTAAGCGAAGCC AATGCCGAGGACACCGGGCGATCCAACGCTCCGTTCAACTACCAAAACTACAAGCGCTCC TCTGCGACTGCGACCTCACCTCCAGGTGACCGCAGTGAAGCAGGGCTCGCTGGTGGCAGC GGCGCGAGAGATGACACGCCGTTCAGCTACAGCTACAGGGCGCCGAGCCAACAAGGGGTA CCGGCCAGCGGCGGCGCGAGAGACGACACGCCGTTCAGCTACAGTTACAGGGCGCCGAGC CAACAAGAGGTACCGGCCAGCGGCGGCGCGAGAGACGACACGCCGTTCAGCTACAGTTAC AGGGCGCCGAGCCAACAAGAGGTACCGGCCAGCGGCGGCGCGAGAGACGACACGCCGTTC AGCTACAGCTACAGAGCGCCGAGCCAAGGGGTACCGGCCAGCGGCGTCTCGAGAGACGAC ACGACATTCAGCTACGACGACTACAAGGCGCGGAGCCAAGCGGTCGCCGGCAGCGGCCCC AGAGACGATCAGTTCAGCTACGATTACTCCGCCTACGAAGCACCCATCGAGCACCACCAC TCGGAGGTCCGCGCGACGGCGCGAAGCGGCGGTGTGGGCACGCCAACGCCTCACACGGCG GTGTTCTTTCACGAGGAAGCGGTGCGCGTGGGCGAGCGCCTGCCGCTCCACTTCCAGGCC GCGGCGCCGGCCGCGCTGGGATTCCTGCCGCGCCGCGCCGCCGACTCCATCCCGTTCACG ACGGCGGCGCTGCCGGCCGTCCTCGCGCTCTTCGGCGTCGCCCCAAGTTCGTCCAGGGCC GCCGCCATGGCGGAGACGCTGCGCACCTGCGAGCGGCCGCCGCCCGCCGGGGAGGCCGGG GCCAGGTTCTGCGCCACGTCGCTGGAGGCCCTGGTGGAGCGCGCCGTGGCGGCGCTGGGA ACGCGCGACATCCGGGCGGTGACCTCTGCGCTTCCCCGCGCGGGGCTGCCGCCGCAGGCG TACGCCGTCCGCGCCGTGCGGCGCGTCGGCGGCGGCCCCAGCTTCGTGGCGTGCCACGAC GAGGCGTACCCTTACACCGTGTACCGGTGCCACGACACGGGGCCCGCCAGGGCGTACCTG GTGGAGATGGAGGGCGCCCGCGGCGGCGGCGCGATCACCGTGGCCACCGTGTGCCACACC GACACGTCCCGGTGGAACCCGGAGCACGTCTCGTTCAAGCTCCTCGGCACCAAGCCCGGC GGCGCGCCCGTCTGCCACCTGATGCCGTACGGGCATATCATCTGGGCCAAGAACGTGAAA CCCTCGCCGGCGTGA

Peptide Sequence

PEP ID	Zm00001d031312_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:185850815:185852753:1 gene:Zm00001d031312 transcript:Zm00001d031312_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BURP domain-containing protein-RD22-like6 description:RAFTIN1a protein
Sequence	MARFASAVLFAAVLLMAGRLTHAGPSTAEVLWRRAVLPGSAVPNAVLRLLRPYSHFVSEA NAEDTGRSNAPFNYQNYKRSSATATSPPGDRSEAGLAGGSGARDDTPFSYSYRAPSQQGV PASGGARDDTPFSYSYRAPSQQEVPASGGARDDTPFSYSYRAPSQQEVPASGGARDDTPF SYSYRAPSQGVPASGVSRDDTTFSYDDYKARSQAVAGSGPRDDQFSYDYSAYEAPIEHHH SEVRATARSGGVGTPTPHTAVFFHEEAVRVGERLPLHFQAAAPAALGFLPRRAADSIPFT TAALPAVLALFGVAPSSSRAAAMAETLRTCERPPPAGEAGARFCATSLEALVERAVAALG TRDIRAVTSALPRAGLPPQAYAVRAVRRVGGGPSFVACHDEAYPYTVYRCHDTGPARAYL VEMEGARGGGAITVATVCHTDTSRWNPEHVSFKLLGTKPGGAPVCHLMPYGHIIWAKNVK PSPA

Transcript Sequence

Transcript ID	Zm00001d031312_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:185850815:185852753:1 gene:Zm00001d031312 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BURP domain-containing protein-RD22-like6 description:RAFTIN1a protein
Sequence	CAGCTTGTTCGCACACGAGAAGGCCAGGGAGACGTCTTGCTTCTCCTTCGCTCGTCTACC TGCTTCCTAGTTGTTCCATCATCCATGGCGCGCTTCGCCTCCGCTGTCCTCTTCGCCGCT GTCCTGCTCATGGCTGGACGGCTGACCCATGCGGGGCCGTCGACGGCCGAGGTGCTTTGG CGGCGCGCAGTCCTGCCGGGCTCCGCCGTGCCGAACGCCGTCCTCCGGCTCCTACGCCCC TATAGCCACTTCGTAAGCGAAGCCAATGCCGAGGACACCGGGCGATCCAACGCTCCGTTC AACTACCAAAACTACAAGCGCTCCTCTGCGACTGCGACCTCACCTCCAGGTGACCGCAGT GAAGCAGGGCTCGCTGGTGGCAGCGGCGCGAGAGATGACACGCCGTTCAGCTACAGCTAC AGGGCGCCGAGCCAACAAGGGGTACCGGCCAGCGGCGGCGCGAGAGACGACACGCCGTTC AGCTACAGTTACAGGGCGCCGAGCCAACAAGAGGTACCGGCCAGCGGCGGCGCGAGAGAC GACACGCCGTTCAGCTACAGTTACAGGGCGCCGAGCCAACAAGAGGTACCGGCCAGCGGC GGCGCGAGAGACGACACGCCGTTCAGCTACAGCTACAGAGCGCCGAGCCAAGGGGTACCG GCCAGCGGCGTCTCGAGAGACGACACGACATTCAGCTACGACGACTACAAGGCGCGGAGC CAAGCGGTCGCCGGCAGCGGCCCCAGAGACGATCAGTTCAGCTACGATTACTCCGCCTAC GAAGCACCCATCGAGCACCACCACTCGGAGGTCCGCGCGACGGCGCGAAGCGGCGGTGTG GGCACGCCAACGCCTCACACGGCGGTGTTCTTTCACGAGGAAGCGGTGCGCGTGGGCGAG CGCCTGCCGCTCCACTTCCAGGCCGCGGCGCCGGCCGCGCTGGGATTCCTGCCGCGCCGC GCCGCCGACTCCATCCCGTTCACGACGGCGGCGCTGCCGGCCGTCCTCGCGCTCTTCGGC GTCGCCCCAAGTTCGTCCAGGGCCGCCGCCATGGCGGAGACGCTGCGCACCTGCGAGCGG CCGCCGCCCGCCGGGGAGGCCGGGGCCAGGTTCTGCGCCACGTCGCTGGAGGCCCTGGTG GAGCGCGCCGTGGCGGCGCTGGGAACGCGCGACATCCGGGCGGTGACCTCTGCGCTTCCC CGCGCGGGGCTGCCGCCGCAGGCGTACGCCGTCCGCGCCGTGCGGCGCGTCGGCGGCGGC CCCAGCTTCGTGGCGTGCCACGACGAGGCGTACCCTTACACCGTGTACCGGTGCCACGAC ACGGGGCCCGCCAGGGCGTACCTGGTGGAGATGGAGGGCGCCCGCGGCGGCGGCGCGATC ACCGTGGCCACCGTGTGCCACACCGACACGTCCCGGTGGAACCCGGAGCACGTCTCGTTC AAGCTCCTCGGCACCAAGCCCGGCGGCGCGCCCGTCTGCCACCTGATGCCGTACGGGCAT ATCATCTGGGCCAAGAACGTGAAACCCTCGCCGGCGTGAGGAGCGGAGCACCACACACCA TTAATCCGCTGGAGAAGAACTATTATGTGTTATGTTCAGGGCTTGGCTGTCTGATCTGCT CTTGTTTGTGCTATGCTGTGCTGTGCTATGCTAGGTCACTAGATCAGCGTCTGCAATAAA ATGGACTGCTTTTGTGCAGTTCTGCTACATGAAAATACTCAATTGTGAAGCCATCAGAAT TCAGATCATATA