Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031256_T028
CDS Infomation

cds chromosome:B73_RefGen_v4:1:184086646:184104355:1 gene:Zm00001d031256 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like protein
Sequence

ATGAATACTAGTGAAAGTGATCTTTCTCTGCTTATGCTAGGTTTGATCTGTCTTGCTGCA
ATCACAAAGTTTGGATCAGCAAAAGTTTCTTGTCAGCAATTCTCTTCAATGGTGCCTGAT
ATTATTGGTCGATTCATGGATATGCTTCTTGAGTTTGCCCCTCTAAGTAAAGCATATAAC
TTGGCGAAAGATATTGGTCTTCGGAGAGAATTTTTGTATAATTTTGGTCCTCGTGCTGCT
GTTCCTAAACTTGGCAATGACCATGGACTTGAAATATCATTTTGGATTGAACTGGTGCAG
AAGCAATTACTCTGGGCTCTTGATCGTGAAAAGATATGGTCAAGACTGACAACAAGTGAA
AGCATTGAGGTTCTGGAAAAGGATCTTGCAATATTTGGTTTTTTTGTTGCTTTGGGTAGA
AGCACACAAGGATATTTGTCTTTCAAGGGTTTGACTGATTTGGATGATTCACTGAATGGT
ATTGTAAGGTATCTTATCGGTGGGAGTGTACTATATTATCCACAGCTGTCCTCGATTAGT
TCATATCAACTGTATGTGGAGGTAGTCTGTGAAGAGCTCGAGTGGCTTCCTTTTTACAAT
GATGATGTTTTAAGTGCAAAAACTGATACTGAAGGTAGAGAAGAAGTGCCTAAAGGAGAA
GTCATATCAAGAGTCCTAAATGTGTGCTCTTACTGGATGACTAGTTTTACAAAGTACAGC
TCATGGCTTGAGAACCCTTCAAATGTGAAGGCTGCAAAGTTCCTTTCTAAGGGACATGTC
ATGTTGAGTGACTGCATGAAGGAGCTTGACATATCAAGAAATATGTCAAACGACAGTGGC
TTCCTAGAACCTGAAGAAGAATTGGATACTGGAACAGAATTAGCTTCCTTTGACAAGTCG
CTTGAAAATGTTGAAGAAGCTCTGGTTAAGTTAGAAAATTTGCTTCAAGAATTACATGTT
TCCAGTTCGCACTCTGGTAAGGAGGATCTGAAGGCTGCATGCTCTGATCTTGAAATGATA
AGAAGACTGAAGAAAGAAGCTGAGCTTCTTGAGGCATCCTTTCTAGCAAAAGCAGAATAT
CTGGAGGCCGATGCAAGTAGCGGATCACTATCTCCTGCAGAGGAAGGACCTGTAAAGACA
AGTAGCAGGACGAACGATACATCAGCACCACAAAAAACAGGAAGCAGGGTGGATAATAAA
CGTCGCCCATTTTGGGACTTCTTTGGTCGGTCTTTGAAAGTTGATCCAGCTCTTGCAGAT
CAGGATCTGATCACTGTCGCCAATGTGGAGAAGGAAGGCATGGAGTCAAATGACATCCTC
CGCTTCGAACAGTTAAGACGTGAGCTGATTGAGTTAGAAAAGAGAGTGCAGAAGAGTGCG
GATGAAGCTCAAAAGGAGGAGGAGATGGTTGTCGCAGAAAAAACAACTGCACCATCGCCT
GGATCATCAGTTTCTTCTCGTCAGACTACCAAGAAAGAAAATGTCATAACTAAATCAGTG
GAGAAGGTCAAAGAGACTACAACGACTGTGTTGCAGGGGACACAACTATTAGCAATTGAT
ACAGGAGCTGCTATGGGTTTGCTAAAAAGAGCTCTTATTGGGGATGAACTAACTCAGAAG
GAAAAGCAGGCTCTTCAAAGAACATTGACAGATTTGGCGTCTGTCGTTCCTATAGGAATA
CTCATGCTTTTGCCACTTACCGCCGTTGGTCATGCTGCTATTTTGGCTTTCATCCAGAGA
TATGTGCCATCGATGATCCCGTCCACATATGCCCCCGGTAGGTTGGATCTCCTTAGGCAG
ATTGAGAAGGTTAAGGAAATGGAAGTTGCTGAAGGCAGCAGTGAAGATATATTGGAGGAA
CTGAACAAATGA

Peptide Sequence

PEP ID

Zm00001d031256_P028
PEP Infomation

pep chromosome:B73_RefGen_v4:1:184086646:184104355:1 gene:Zm00001d031256 transcript:Zm00001d031256_T028 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like protein
Sequence

MNTSESDLSLLMLGLICLAAITKFGSAKVSCQQFSSMVPDIIGRFMDMLLEFAPLSKAYN
LAKDIGLRREFLYNFGPRAAVPKLGNDHGLEISFWIELVQKQLLWALDREKIWSRLTTSE
SIEVLEKDLAIFGFFVALGRSTQGYLSFKGLTDLDDSLNGIVRYLIGGSVLYYPQLSSIS
SYQLYVEVVCEELEWLPFYNDDVLSAKTDTEGREEVPKGEVISRVLNVCSYWMTSFTKYS
SWLENPSNVKAAKFLSKGHVMLSDCMKELDISRNMSNDSGFLEPEEELDTGTELASFDKS
LENVEEALVKLENLLQELHVSSSHSGKEDLKAACSDLEMIRRLKKEAELLEASFLAKAEY
LEADASSGSLSPAEEGPVKTSSRTNDTSAPQKTGSRVDNKRRPFWDFFGRSLKVDPALAD
QDLITVANVEKEGMESNDILRFEQLRRELIELEKRVQKSADEAQKEEEMVVAEKTTAPSP
GSSVSSRQTTKKENVITKSVEKVKETTTTVLQGTQLLAIDTGAAMGLLKRALIGDELTQK
EKQALQRTLTDLASVVPIGILMLLPLTAVGHAAILAFIQRYVPSMIPSTYAPGRLDLLRQ
IEKVKEMEVAEGSSEDILEELNK

Transcript Sequence

Transcript ID

Zm00001d031256_T028
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:184086646:184104355:1 gene:Zm00001d031256 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like protein
Sequence

GCCTCCTCTTCCCCCGTCCACCCATTCTCCTGGCCGCTCTTCCCCTTCGTCGTCGCACTC
CGCTAGCTCACCTCCTCGTCCCCATATAAACCATATCCCTCTCCGGGCCCCGCGCAGCCG
CCGGCGACAAGCGCGCAGGAGCAGCAGTTGTCGCGCCTCACTGATGGCGACCGCCGTGGC
GTCGCAGCCGTGCCACCTTCCCCTCAGCGCCGGCGGAGATCCCAGGTGCGCGGCCAGCAC
TTCGAATGTTCATACTCTGGAGAAAGTATATGGTTTCAGATTCATATGCAGAAGCATTGT
TGATGTAAAGACTCACAAATTCCACTCCCGCATTTCAAAGAGGAAGTGCTACTTGAGGAA
CTCACTGTCGGAGTGTGACAGGACCATCCACAGTGGTAGATGGTTGGAGTTTCGGAGACA
CAAGGGAGTCTTCCAGAGAACTAGAAGGATGGTTCACATTATTCCATTGGCTTCTGATGG
TGATGGCAACCATATATCTGTTAATGGAGCTCTGCAAGTTGGTTCTACAAGCAACATTGA
TGAAATAAAGTTGAAATTGAATAAAGCATTGCAGAGTGAAGATATCAGCAATGGACTCGT
CCAGTCGATACATGATGCTGCAAGATCTATTGAGTTGGCTCTCATAGAGCACAGCAAATT
GCCAAAGAGCTCTTGGTTTCCAAAGACATGGCTAGGCGTTGAGAACAATGCTTGGATAAA
ATCACTGTCTTACCAGGCTGCTGTAGACTCATTGTTGAAAGCAGTTATCGATGTTTCATC
TCGTGGGAATGACAGAGATAGAGATATTAATGTGTTTGTTCAAAGGAGTTTGTCCCGCCT
GCTCACCCCCCTTGAGAGTGTTATCAAGAATGAATTATCTAAGAGGGAACCTGCATTGTA
TGAATGGTATTCATCCGATCAAAATCCTTTGGTGGTGAGACAATTTGTAAACATTTTTGA
AAATGATCCAATGTTTTACTCTGCTACAGCAATGTAAGTTCATTTCTATCTTTTGGACTA
TAAGGCTGTCTCCAACAGCTTATCCATCCTATCTTCTATCTAATCTTCTATTTTAAACTT
CACTTTGTGAACAGTGCAAAACAGTGTTTTGCACGACCATATGCACGATCTGCTGGGGAC
AGCCTACCATGCTCATAGCCAGTAGCCCAGTAACTTGTACAAGACTCATGGATATTTTCT
CTTGTTTGCTGTCAGATGCCTTGAAGGCGAGCCGATGAATACTAGTGAAAGTGATCTTTC
TCTGCTTATGCTAGGTTTGATCTGTCTTGCTGCAATCACAAAGTTTGGATCAGCAAAAGT
TTCTTGTCAGCAATTCTCTTCAATGGTGCCTGATATTATTGGTCGATTCATGGATATGCT
TCTTGAGTTTGCCCCTCTAAGTAAAGCATATAACTTGGCGAAAGATATTGGTCTTCGGAG
AGAATTTTTGTATAATTTTGGTCCTCGTGCTGCTGTTCCTAAACTTGGCAATGACCATGG
ACTTGAAATATCATTTTGGATTGAACTGGTGCAGAAGCAATTACTCTGGGCTCTTGATCG
TGAAAAGATATGGTCAAGACTGACAACAAGTGAAAGCATTGAGGTTCTGGAAAAGGATCT
TGCAATATTTGGTTTTTTTGTTGCTTTGGGTAGAAGCACACAAGGATATTTGTCTTTCAA
GGGTTTGACTGATTTGGATGATTCACTGAATGGTATTGTAAGGTATCTTATCGGTGGGAG
TGTACTATATTATCCACAGCTGTCCTCGATTAGTTCATATCAACTGTATGTGGAGGTAGT
CTGTGAAGAGCTCGAGTGGCTTCCTTTTTACAATGATGATGTTTTAAGTGCAAAAACTGA
TACTGAAGGTAGAGAAGAAGTGCCTAAAGGAGAAGTCATATCAAGAGTCCTAAATGTGTG
CTCTTACTGGATGACTAGTTTTACAAAGTACAGCTCATGGCTTGAGAACCCTTCAAATGT
GAAGGCTGCAAAGTTCCTTTCTAAGGGACATGTCATGTTGAGTGACTGCATGAAGGAGCT
TGACATATCAAGAAATATGTCAAACGACAGTGGCTTCCTAGAACCTGAAGAAGAATTGGA
TACTGGAACAGAATTAGCTTCCTTTGACAAGTCGCTTGAAAATGTTGAAGAAGCTCTGGT
TAAGTTAGAAAATTTGCTTCAAGAATTACATGTTTCCAGTTCGCACTCTGGTAAGGAGGA
TCTGAAGGCTGCATGCTCTGATCTTGAAATGATAAGAAGACTGAAGAAAGAAGCTGAGCT
TCTTGAGGCATCCTTTCTAGCAAAAGCAGAATATCTGGAGGCCGATGCAAGTAGCGGATC
ACTATCTCCTGCAGAGGAAGGACCTGTAAAGACAAGTAGCAGGACGAACGATACATCAGC
ACCACAAAAAACAGGAAGCAGGGTGGATAATAAACGTCGCCCATTTTGGGACTTCTTTGG
TCGGTCTTTGAAAGTTGATCCAGCTCTTGCAGATCAGGATCTGATCACTGTCGCCAATGT
GGAGAAGGAAGGCATGGAGTCAAATGACATCCTCCGCTTCGAACAGTTAAGACGTGAGCT
GATTGAGTTAGAAAAGAGAGTGCAGAAGAGTGCGGATGAAGCTCAAAAGGAGGAGGAGAT
GGTTGTCGCAGAAAAAACAACTGCACCATCGCCTGGATCATCAGTTTCTTCTCGTCAGAC
TACCAAGAAAGAAAATGTCATAACTAAATCAGTGGAGAAGGTCAAAGAGACTACAACGAC
TGTGTTGCAGGGGACACAACTATTAGCAATTGATACAGGAGCTGCTATGGGTTTGCTAAA
AAGAGCTCTTATTGGGGATGAACTAACTCAGAAGGAAAAGCAGGCTCTTCAAAGAACATT
GACAGATTTGGCGTCTGTCGTTCCTATAGGAATACTCATGCTTTTGCCACTTACCGCCGT
TGGTCATGCTGCTATTTTGGCTTTCATCCAGAGATATGTGCCATCGATGATCCCGTCCAC
ATATGCCCCCGGTAGGTTGGATCTCCTTAGGCAGATTGAGAAGGTTAAGGAAATGGAAGT
TGCTGAAGGCAGCAGTGAAGATATATTGGAGGAACTGAACAAATGAAATAAGCTGGGCAT
GTACAGATGGACATGATTATACTGCTTAGCTTACGGTCTTTCCTGTAAAGTTGTTTTGGA
ACAAGACATTTGAGGGGGTTTGTTTTATCTAAAGATTCTTTGAATGGCATACCCGCTGGA
AACAGAAGTGCAAGGCCCTAGGAATAAGTAACCAATCATTGTGTCGACAAATGTTCCACG
TCTGCAGGCTGGTGTATACATAAAACATACTCCACATTATACATTACATGGGCGGCTCAC
GGTGCCCTTCAACATAGTAGAGGATGAATGTCCAAGTTCCTCCTGGACAGTGTTCTGTGT
AGGGTAGTGGTTTTGATAGAGGATTGTATATCTAGTTGGTATGTTGGTGATCACCTTTGT
TTTGTTTTTTAGGAACCAAGCCTACTACATGCATTATTGTCTGTACCCAAATGCCAAGTT
CAGTGATCTCCTACGGGATTGAGTGGTGCGGGCATTTTCTAAT