Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031253_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:183880314:183892062:-1 gene:Zm00001d031253 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dicarboxylic acid transporter2 description: dicarboxylic acid transporter2
Sequence

ATGGAGAGCCTCCGGCTCGCCGTCACCCACCGACCGGCTCTCCCTCTCCCGACCTCCCAT
AGCCACCTCCGCCGCCGCCATCTGCACCTCCACCTCCACTCTTACCCCAATCCCCTCTCC
CTCTCACCCCCCATCGCCTCCCACCTCTCACCTATCCCTCGCCGCCACCTGCCCCCGCTC
CTCGCCTCCGCATCGGCCTCTCAAGCGAGCTCTAAGCCGGCGGCGTCGGCGGCATCTGGC
GGTGCTAAACCGCTGCCCCTCTTTCTCTCGCTTGCCGCCGGCCTCGCCGTCCGCTTCCTC
GTGCCGCGGCCGGCCGAGGTAACCCCAGAGGCCTGGCAGCTCCTCTCCATCTTCCTCTCC
ACCATCGCGGGGCTCGTCCTCGGCCCGCTCCCCGTCGGTGCGTGGGCGTTCCTTGGCCTC
ACAGCCACCGTCGCCACCCGCACGCTCCCCTTCACCGCCGCGTTCGGGGCGTTCACTAAC
GAAGTCATCTGGCTCATCGTCATATCCTTCTTCTTCGCGCGCGGCTTTGTCAAAACCGGA
CTCGGCGACCGCGTCGCCACGTACTTCGTCAAATGGCTGGGGCGCAGCACTTTGGGCCTA
TCCTATGGGCTTGCCATCAGCGAGGCTCTCATCTCCCCTGCCATGCCCAGCACCACGGCC
AGGGCTGGAGGTGTTTTCCTTCCCATCGTCAAGTCGCTATCGCTCTCGTCCGGAAGCAAG
CCCAACGATCCATCGGCGAAGAAACTCGGCTCTTATCTTGTGCAATCGCAGTTACAGGCA
GCTGCGAACTCCAGTGCTCTCTTCTTGACAGCAGCTGCACAGAACCTGTTGTGTCTGAAG
TTAGCAGAGGAGATTGGTGTTAGTATCGGAAACCCATGGATTACTTGGTTCAAGGTTTCT
AGCGTGCCAGCAGTTCTTGGGCTTTTAGTGACTCCTTATTTGATTTACAAAATATTCCCC
CCTGAAATAAAGGACACTCCTGAAGCCCCAGCATTAGCTGCCGAGAAGCTAAAGAACATG
GGTCCAGTAACAAAAAATGAATGGGTCATGATTGGGACGATGCTTCTTGCAGTCTCACTA
TGGATTTTTGGGGAAACTATTGGCGTATCCAGCGTTGTTGCTGCAATGATTGGACTCTCA
ATACTTCTTGTGCTTGGAGTGCTAAACTGGGAGGATTGTTTGAATGAGAAGTCTGCATGG
GACACCCTAGCTTGGTTTGCTATTTTAGTTGGTTTGGCTGGGCAGCTTACTAACCTTGGG
ATTGTGTCCTGGATGTCGAATTGTGTTGCCAAGGTTCTTCAATCTTTCTCATTGAGCTGG
CCTGCAGCATTTGTTGTCCTTCAGGCCTCGTACTTCTTTATTCACTATATATTTGCAAGC
CAAACTGCACATGTTGGAGCTTTATACTCAGCATTTCTTGCGATGCATTTAGCAGCTGGT
GTGCCAGCTCTAATGTCGGCACTTGCTTTGGCATACAATGCAAACCTCTTTGGAGCACTA
ACACACTATAGTAGCGGGCAATCTGCAGTATACTTTGGAGCGGGGTATGTTGACCTTCCG
GATGTATTCAAGCTGGGTTTTATAACAGCCGCAATCAATGCTGTAATTTGGGGAGTTGCT
GGTGCATTATGGTGGAAATTTTTGGGTCTTTATTGA

Peptide Sequence

PEP ID

Zm00001d031253_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:183880314:183892062:-1 gene:Zm00001d031253 transcript:Zm00001d031253_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dicarboxylic acid transporter2 description: dicarboxylic acid transporter2
Sequence

MESLRLAVTHRPALPLPTSHSHLRRRHLHLHLHSYPNPLSLSPPIASHLSPIPRRHLPPL
LASASASQASSKPAASAASGGAKPLPLFLSLAAGLAVRFLVPRPAEVTPEAWQLLSIFLS
TIAGLVLGPLPVGAWAFLGLTATVATRTLPFTAAFGAFTNEVIWLIVISFFFARGFVKTG
LGDRVATYFVKWLGRSTLGLSYGLAISEALISPAMPSTTARAGGVFLPIVKSLSLSSGSK
PNDPSAKKLGSYLVQSQLQAAANSSALFLTAAAQNLLCLKLAEEIGVSIGNPWITWFKVS
SVPAVLGLLVTPYLIYKIFPPEIKDTPEAPALAAEKLKNMGPVTKNEWVMIGTMLLAVSL
WIFGETIGVSSVVAAMIGLSILLVLGVLNWEDCLNEKSAWDTLAWFAILVGLAGQLTNLG
IVSWMSNCVAKVLQSFSLSWPAAFVVLQASYFFIHYIFASQTAHVGALYSAFLAMHLAAG
VPALMSALALAYNANLFGALTHYSSGQSAVYFGAGYVDLPDVFKLGFITAAINAVIWGVA
GALWWKFLGLY

Transcript Sequence

Transcript ID

Zm00001d031253_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:183880314:183892062:-1 gene:Zm00001d031253 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dicarboxylic acid transporter2 description: dicarboxylic acid transporter2
Sequence

ACCTGTCGTTGCTCTCCGCCGCCACCAGTGCCCGTAGCGCTCGCCGCCGCCGCCGCCGCC
GCCACCAATGGAGAGCCTCCGGCTCGCCGTCACCCACCGACCGGCTCTCCCTCTCCCGAC
CTCCCATAGCCACCTCCGCCGCCGCCATCTGCACCTCCACCTCCACTCTTACCCCAATCC
CCTCTCCCTCTCACCCCCCATCGCCTCCCACCTCTCACCTATCCCTCGCCGCCACCTGCC
CCCGCTCCTCGCCTCCGCATCGGCCTCTCAAGCGAGCTCTAAGCCGGCGGCGTCGGCGGC
ATCTGGCGGTGCTAAACCGCTGCCCCTCTTTCTCTCGCTTGCCGCCGGCCTCGCCGTCCG
CTTCCTCGTGCCGCGGCCGGCCGAGGTAACCCCAGAGGCCTGGCAGCTCCTCTCCATCTT
CCTCTCCACCATCGCGGGGCTCGTCCTCGGCCCGCTCCCCGTCGGTGCGTGGGCGTTCCT
TGGCCTCACAGCCACCGTCGCCACCCGCACGCTCCCCTTCACCGCCGCGTTCGGGGCGTT
CACTAACGAAGTCATCTGGCTCATCGTCATATCCTTCTTCTTCGCGCGCGGCTTTGTCAA
AACCGGACTCGGCGACCGCGTCGCCACGTACTTCGTCAAATGGCTGGGGCGCAGCACTTT
GGGCCTATCCTATGGGCTTGCCATCAGCGAGGCTCTCATCTCCCCTGCCATGCCCAGCAC
CACGGCCAGGGCTGGAGGTGTTTTCCTTCCCATCGTCAAGTCGCTATCGCTCTCGTCCGG
AAGCAAGCCCAACGATCCATCGGCGAAGAAACTCGGCTCTTATCTTGTGCAATCGCAGTT
ACAGGCAGCTGCGAACTCCAGTGCTCTCTTCTTGACAGCAGCTGCACAGAACCTGTTGTG
TCTGAAGTTAGCAGAGGAGATTGGTGTTAGTATCGGAAACCCATGGATTACTTGGTTCAA
GGTTTCTAGCGTGCCAGCAGTTCTTGGGCTTTTAGTGACTCCTTATTTGATTTACAAAAT
ATTCCCCCCTGAAATAAAGGACACTCCTGAAGCCCCAGCATTAGCTGCCGAGAAGCTAAA
GAACATGGGTCCAGTAACAAAAAATGAATGGGTCATGATTGGGACGATGCTTCTTGCAGT
CTCACTATGGATTTTTGGGGAAACTATTGGCGTATCCAGCGTTGTTGCTGCAATGATTGG
ACTCTCAATACTTCTTGTGCTTGGAGTGCTAAACTGGGAGGATTGTTTGAATGAGAAGTC
TGCATGGGACACCCTAGCTTGGTTTGCTATTTTAGTTGGTTTGGCTGGGCAGCTTACTAA
CCTTGGGATTGTGTCCTGGATGTCGAATTGTGTTGCCAAGGTTCTTCAATCTTTCTCATT
GAGCTGGCCTGCAGCATTTGTTGTCCTTCAGGCCTCGTACTTCTTTATTCACTATATATT
TGCAAGCCAAACTGCACATGTTGGAGCTTTATACTCAGCATTTCTTGCGATGCATTTAGC
AGCTGGTGTGCCAGCTCTAATGTCGGCACTTGCTTTGGCATACAATGCAAACCTCTTTGG
AGCACTAACACACTATAGTAGCGGGCAATCTGCAGTATACTTTGGAGCGGGGTATGTTGA
CCTTCCGGATGTATTCAAGCTGGGTTTTATAACAGCCGCAATCAATGCTGTAATTTGGGG
AGTTGCTGGTGCATTATGGTGGAAATTTTTGGGTCTTTATTGAGTGTCGGGGCAGTGTAA
GTACGTGAAAATCGTACCATATTATCAAACAAGTAATTCATGATCCAGCATCGGAGGTGG
CCAGGTGGGTTCGTTTTTCTTCCGAGGGCCTATGAATGCATCATAACAGAGGAACGCTCA
TCTTTAGAAGTTTTTGAGCATTATCATCAACCTAGAAAGCAGATATGTTTTCGTAGGTTC
TTAAATCGACGGTCGTTATATATCCTTTGATTTGATTGTTGTACCCTCGTATCTCCTCCC
CAAGGTAAATAAAATGCATGAGGGACTTTTGAA