Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031213_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:182385065:182386594:-1 gene:Zm00001d031213 gene_biotype:protein_coding transcript_biotype:protein_coding description:LigA
Sequence	ATGTCGGGCGCCAGCGCCGCCACCCTGCTCAGCCTCTGGTCGGGCACCGTCAACCTGGCG CCGCTCCTGGGCGCCTTCCTCAGCGACACCTACATGGGCCGCTACGCCACCATCGCCTTC GCCTCCATGGCCTCCTTCCTCGGCATGATCGTCCTCACCCTCACCGCCGCCGTGCCGTCG CTCCACCCTGCCGCCAACAGCAGCACCACCGGCGGCCCCTCGTCCCTCCAGATGGCCGTG CTCCTCGCCTCCTTCGCGCTGCTGGCCGTCGGCGCCGGCGGCATCCGGCCCTGCAACCTG GCCTTCGGCGCCGACCAGTTCGACCCGCGCACCCCAGCCGGCCGCCGGGGCATCAACAGC TTCTTCAACTGGTACTACTTCACCTTCACCATCGCCATGATGGTCTCCGCCACCGTCATC ATCTACCTCCAGAGCGACGTCAGCTGGGCGCTGGGGCTGGCCGTGCCGGCCACGCTCATG GGCCTCTCCTGCGCGCTCTTCTTCATGGGCACGCGCCTCTACGTCCGCGTCCCGCCCGAG GGCAGCCCCTTCACCAGCTTCGCGCAGGTGCTCGTCGCCGCCGCGCGCAAGCGACGCCTG CCCGCGCCCCGCGCCGACCTCTACGACCCGCCGCACCGGAGCAGCCTCATCTCCAAGATC GCGTACACCGACCAGTTCCTGTGCCTCGACAAGGCGGCCGTGCGCACCCCTGAGGACGGC CCCGCCCCCAACCCCTGGCGCCTCTGCACGCTGCAGCAGGTGGAGGAGGTCAAGTGCCTG GCGCGCCTGCTCCCCGTCTGGTCCTCCGGCATCGTCTACTACATCGTGCTCACCAACCTC GGCAACTACAACGTGCTCCAGGCCATGCAGACCGACCGCCGCGTCGGCCGCGGGGGCTTC CACATCCCCGCGGGCTCCTTCGTCGTCTTCAACATGCTGGCGCTCACCCTCTGGCTCCCC TTCTACGACGGCGTGCTCGTGCCGGCCATGCAGCGCCTCACCGGGCGCGAGGGCGGCATC ACCCAGCTGCAGCGGATCGGCACGGGGATCGTCCTCTCCATCGTCACCATGCTCGTCGCC GCCGCCGTCGAGCGCCACCGCCGCAGGCTCGGCGACTCCGCCTCCTGCTTCCTGCTCGTG CCGCAGCAGATGCTGGCCGGCCTGTCCGAGGCCTTCGGCATCATCGGACAGGTCGACTTC TACTACAAACAGTTCCCGGAGAACATGCGCAGCGTCGCGGGGGCCATGCTCTTCCTGGCA TTCGCCATCGCCAGCTACGCCAGCGGCCTCATGGTCAGCGTCGTGCACCGGACCACCGGA GGCCCCGACGGCCGCCCCGACTGGCTGGCGCAGGACCTCAACCAGGGCCACGTCGACCTC TACTACCTGCTCATAGCCGCCATGGCGGCGGTCAACCTAGTCTACTTCGTCGCCTGCGCG CGCTGGTACAGGTTCAAGAACCCGGCCGCCGCCGACGTCGAGCAGCTGGAGCTGGAGTTA GAGGGAAAGGCCGCAGCGCCTCCTGTCTGA

Peptide Sequence

PEP ID	Zm00001d031213_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:182385065:182386594:-1 gene:Zm00001d031213 transcript:Zm00001d031213_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:LigA
Sequence	MSGASAATLLSLWSGTVNLAPLLGAFLSDTYMGRYATIAFASMASFLGMIVLTLTAAVPS LHPAANSSTTGGPSSLQMAVLLASFALLAVGAGGIRPCNLAFGADQFDPRTPAGRRGINS FFNWYYFTFTIAMMVSATVIIYLQSDVSWALGLAVPATLMGLSCALFFMGTRLYVRVPPE GSPFTSFAQVLVAAARKRRLPAPRADLYDPPHRSSLISKIAYTDQFLCLDKAAVRTPEDG PAPNPWRLCTLQQVEEVKCLARLLPVWSSGIVYYIVLTNLGNYNVLQAMQTDRRVGRGGF HIPAGSFVVFNMLALTLWLPFYDGVLVPAMQRLTGREGGITQLQRIGTGIVLSIVTMLVA AAVERHRRRLGDSASCFLLVPQQMLAGLSEAFGIIGQVDFYYKQFPENMRSVAGAMLFLA FAIASYASGLMVSVVHRTTGGPDGRPDWLAQDLNQGHVDLYYLLIAAMAAVNLVYFVACA RWYRFKNPAAADVEQLELELEGKAAAPPV

Transcript Sequence

Transcript ID	Zm00001d031213_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:182385065:182386594:-1 gene:Zm00001d031213 gene_biotype:protein_coding transcript_biotype:protein_coding description:LigA
Sequence	ATGTCGGGCGCCAGCGCCGCCACCCTGCTCAGCCTCTGGTCGGGCACCGTCAACCTGGCG CCGCTCCTGGGCGCCTTCCTCAGCGACACCTACATGGGCCGCTACGCCACCATCGCCTTC GCCTCCATGGCCTCCTTCCTCGGCATGATCGTCCTCACCCTCACCGCCGCCGTGCCGTCG CTCCACCCTGCCGCCAACAGCAGCACCACCGGCGGCCCCTCGTCCCTCCAGATGGCCGTG CTCCTCGCCTCCTTCGCGCTGCTGGCCGTCGGCGCCGGCGGCATCCGGCCCTGCAACCTG GCCTTCGGCGCCGACCAGTTCGACCCGCGCACCCCAGCCGGCCGCCGGGGCATCAACAGC TTCTTCAACTGGTACTACTTCACCTTCACCATCGCCATGATGGTCTCCGCCACCGTCATC ATCTACCTCCAGAGCGACGTCAGCTGGGCGCTGGGGCTGGCCGTGCCGGCCACGCTCATG GGCCTCTCCTGCGCGCTCTTCTTCATGGGCACGCGCCTCTACGTCCGCGTCCCGCCCGAG GGCAGCCCCTTCACCAGCTTCGCGCAGGTGCTCGTCGCCGCCGCGCGCAAGCGACGCCTG CCCGCGCCCCGCGCCGACCTCTACGACCCGCCGCACCGGAGCAGCCTCATCTCCAAGATC GCGTACACCGACCAGTTCCTGTGCCTCGACAAGGCGGCCGTGCGCACCCCTGAGGACGGC CCCGCCCCCAACCCCTGGCGCCTCTGCACGCTGCAGCAGGTGGAGGAGGTCAAGTGCCTG GCGCGCCTGCTCCCCGTCTGGTCCTCCGGCATCGTCTACTACATCGTGCTCACCAACCTC GGCAACTACAACGTGCTCCAGGCCATGCAGACCGACCGCCGCGTCGGCCGCGGGGGCTTC CACATCCCCGCGGGCTCCTTCGTCGTCTTCAACATGCTGGCGCTCACCCTCTGGCTCCCC TTCTACGACGGCGTGCTCGTGCCGGCCATGCAGCGCCTCACCGGGCGCGAGGGCGGCATC ACCCAGCTGCAGCGGATCGGCACGGGGATCGTCCTCTCCATCGTCACCATGCTCGTCGCC GCCGCCGTCGAGCGCCACCGCCGCAGGCTCGGCGACTCCGCCTCCTGCTTCCTGCTCGTG CCGCAGCAGATGCTGGCCGGCCTGTCCGAGGCCTTCGGCATCATCGGACAGGTCGACTTC TACTACAAACAGTTCCCGGAGAACATGCGCAGCGTCGCGGGGGCCATGCTCTTCCTGGCA TTCGCCATCGCCAGCTACGCCAGCGGCCTCATGGTCAGCGTCGTGCACCGGACCACCGGA GGCCCCGACGGCCGCCCCGACTGGCTGGCGCAGGACCTCAACCAGGGCCACGTCGACCTC TACTACCTGCTCATAGCCGCCATGGCGGCGGTCAACCTAGTCTACTTCGTCGCCTGCGCG CGCTGGTACAGGTTCAAGAACCCGGCCGCCGCCGACGTCGAGCAGCTGGAGCTGGAGTTA GAGGGAAAGGCCGCAGCGCCTCCTGTCTGA