Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031136_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:179010349:179015072:-1 gene:Zm00001d031136 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cysteine synthase2 description: cysteine synthase2
Sequence

ATGGGAGAGGCCTCGCCGTCGATCGCCAAGGACGTCACCGAGTTGATCGGGAACACGCCG
CTGGTGTACCTCAACAAGGTGACCGATGGGTGCGTCGGCCGCGTCGCCGCCAAGCTCGAG
TCCATGGAGCCCTGCTCCAGCGTCAAGGATAGGATTGGCTACAGCATGATCACGGACGCA
GAGGAGAAAGGGCTGATTACTCCAGGCGTGAGTGTTCTGATTGAACCAACTAGCGGCAAC
ACAGGCATTGGACTGGCCTTTATGGCTGCTGCCAAGGGCTACAAACTTACACTCACAATG
CCTGCCTCCATGAGCATGGAGAGGAGGATCATATTGAAGGCTTTTGGTGCTGAACTTGTC
CTTACTGACCCACTCTTGGGAATGAAAGGAGCTGTCAAGAAAGCGGAAGAGATACAAGCA
AAGACACCCAACTCGTACATTCTTCAACAATTTGAAAATCCAGCTAACCCAAAGATTCAC
TATGAGACTACTGGGCCTGAAATCTGGAAAGCTACAGCAGGAAAAATTGATGGCCTTGTA
TCTGGTATCGGGACAGGAGGTACCATCACCGGTACTGGGCGATACCTCAGAGAGCAAAAT
CCTAATGTCAAGCTCTATGGTGTGGAGCCAGTGGAGAGTGCTGTTTTGAATGGTGGAAAA
CCTGGACCACACAAGATTCAAGGAATTGGAGCTGGTTTTATCCCTGGAGTCTTGGATGTT
GATCTCCTTGATGAAACTCTACAGGTTTCAAGTGATGAAGCTATCGAGACTGCCAAGGCT
CTTGCTCTGAAAGAAGGGTTGTTGGTTGGAATCTCTTCTGGTGCAGCTGCAGCTGCGGCA
GTTAGGCTTGCTAAGAGGCCAGAAAACGCCGGAAAGCTATTTGTTGTCGTGTTCCCGAGC
TTCGGCGAGCGCTACCTCTCATCGGTGCTGTTCCAGTCCATCAAGAAGGAAGCGGAGAGC
ATGGTGGTCGAGCCCTAG

Peptide Sequence

PEP ID

Zm00001d031136_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:179010349:179015072:-1 gene:Zm00001d031136 transcript:Zm00001d031136_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cysteine synthase2 description: cysteine synthase2
Sequence

MGEASPSIAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDA
EEKGLITPGVSVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFGAELV
LTDPLLGMKGAVKKAEEIQAKTPNSYILQQFENPANPKIHYETTGPEIWKATAGKIDGLV
SGIGTGGTITGTGRYLREQNPNVKLYGVEPVESAVLNGGKPGPHKIQGIGAGFIPGVLDV
DLLDETLQVSSDEAIETAKALALKEGLLVGISSGAAAAAAVRLAKRPENAGKLFVVVFPS
FGERYLSSVLFQSIKKEAESMVVEP

Transcript Sequence

Transcript ID

Zm00001d031136_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:179010349:179015072:-1 gene:Zm00001d031136 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cysteine synthase2 description: cysteine synthase2
Sequence

ACCTGCAGTGACACGGTCCACCTTGGACCAGGCGCCCCGAGCTGTTCCTCTGCGACAGCA
ACCTTGCGTGCATAAAGCCAGCCACCAGCCAGGCAGCCGCCATCTCCAGCGGCTTCTTCC
AAAGCTCCAACTCCGACGAGAACCGCCACTCCTCGAAATCTCGAAGGATTTTCTGCGGCG
AACCCCTTCGTGACGTGACCCAATGGGAGAGGCCTCGCCGTCGATCGCCAAGGACGTCAC
CGAGTTGATCGGGAACACGCCGCTGGTGTACCTCAACAAGGTGACCGATGGGTGCGTCGG
CCGCGTCGCCGCCAAGCTCGAGTCCATGGAGCCCTGCTCCAGCGTCAAGGATAGGATTGG
CTACAGCATGATCACGGACGCAGAGGAGAAAGGGCTGATTACTCCAGGCGTGAGTGTTCT
GATTGAACCAACTAGCGGCAACACAGGCATTGGACTGGCCTTTATGGCTGCTGCCAAGGG
CTACAAACTTACACTCACAATGCCTGCCTCCATGAGCATGGAGAGGAGGATCATATTGAA
GGCTTTTGGTGCTGAACTTGTCCTTACTGACCCACTCTTGGGAATGAAAGGAGCTGTCAA
GAAAGCGGAAGAGATACAAGCAAAGACACCCAACTCGTACATTCTTCAACAATTTGAAAA
TCCAGCTAACCCAAAGATTCACTATGAGACTACTGGGCCTGAAATCTGGAAAGCTACAGC
AGGAAAAATTGATGGCCTTGTATCTGGTATCGGGACAGGAGGTACCATCACCGGTACTGG
GCGATACCTCAGAGAGCAAAATCCTAATGTCAAGCTCTATGGTGTGGAGCCAGTGGAGAG
TGCTGTTTTGAATGGTGGAAAACCTGGACCACACAAGATTCAAGGAATTGGAGCTGGTTT
TATCCCTGGAGTCTTGGATGTTGATCTCCTTGATGAAACTCTACAGGTTTCAAGTGATGA
AGCTATCGAGACTGCCAAGGCTCTTGCTCTGAAAGAAGGGTTGTTGGTTGGAATCTCTTC
TGGTGCAGCTGCAGCTGCGGCAGTTAGGCTTGCTAAGAGGCCAGAAAACGCCGGAAAGCT
ATTTGTTGTCGTGTTCCCGAGCTTCGGCGAGCGCTACCTCTCATCGGTGCTGTTCCAGTC
CATCAAGAAGGAAGCGGAGAGCATGGTGGTCGAGCCCTAGAGCACAAAATTCTGGGCTTC
TGGCAAACTATTTCCTGAGACGTTCACCATTTCCATCACAGAAAAATAAAGCTCGGGTGC
CTTCTGTTGATTTCGACGTACATTTCCCTGCCGATGGTGTCCAGCCCACTGTTGTCGCTG
GAGAACACGTCGTTTTTAGACTTGTGATATTTTACTACTGTTTTGACACTCGTTGTATTT
CTGTATATCGCGTCAGACTGTGAAATAAAAGCAGTACAGTGTGTTTCTTG