Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d031072_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:1:175972594:175977755:-1 gene:Zm00001d031072 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallo-hydrolase/oxidoreductase superfamily protein
Sequence

ATGTGTATTTCATGCAGGTGCAACACTTCTCTTTTGATTGACTATTGCCAAGATGAACGT
GCACATAAGTATATTATAATAGATGTTGGGAAGACATTCAGAGAACAAGTTCTGAGATGG
TTTGTTCGCCACAAAATCCCTTGCGTTGATTCTATTCTTCTGACTCATGAGCATGCAGAT
GCGATCTTGGGCCTTGATGATGTTCGGGTCGTACAGCCATTTAGTCCCACAAATGATATT
GATCCAACCCCAATTTATCTCTCTCAATTCGCTATGGACAGCATCTGCCAAAAGTTCCCC
TATTTGGTCAAAAAGAAATTAAAGGAAGGGGAGGAGGTTAGACGAGTTGCTCAACTTGAA
TGGAAGATAATTGAGAGTGATATTCAGAAACCATTCACAACTTCAGGGCTAGAGTTTGTT
CCCTTGCCGTTTTCTTAA

Peptide Sequence

PEP ID

Zm00001d031072_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:1:175972594:175977755:-1 gene:Zm00001d031072 transcript:Zm00001d031072_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallo-hydrolase/oxidoreductase superfamily protein
Sequence

MCISCRCNTSLLIDYCQDERAHKYIIIDVGKTFREQVLRWFVRHKIPCVDSILLTHEHAD
AILGLDDVRVVQPFSPTNDIDPTPIYLSQFAMDSICQKFPYLVKKKLKEGEEVRRVAQLE
WKIIESDIQKPFTTSGLEFVPLPFS

Transcript Sequence

Transcript ID

Zm00001d031072_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:175972594:175977755:-1 gene:Zm00001d031072 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallo-hydrolase/oxidoreductase superfamily protein
Sequence

GTTCCTATTCTGCTGTTACTTTGTCTCCGCAGGCCCCACATTCTCCGTCTCGCCACGGTC
GCGGTCGTGGTCTCGCTCCGGCAAACCCAATGGCCGCCGCCGTCCCCAACGGCCACACCG
CCGCCGCCGGAGACGACGACGCACCACCCGCCGCTTCGTCGTCGTTGGTGTTCCTGGGCA
CGGGGTGCTCGAGCGCGGTCCCGAACGCGCGGTGCCTGATCCAGCCCCCCGACCCACCCT
GCCCCGTCTGCTCCCAGTCCCTTTCCGTCCCGCCCGAGTTAAACCCTAACTACAGGTGCC
GCCTCGCCTCCTCTCGCCCATCCTCCCTAACCTTGTGAGACTTTACCGTCGTGTTGCGGC
GGGGGGTGAGCGTGGTGGTGTTTAGCGTGTTTACTATCATCACGGGGTCGGTGCGGATCT
GTGATGGTATGAGATCGGAGAGGTTTGGCCTGGTTACTGCTATTAAATTATGCGGGAATG
TTTCATCCTTAGGCCTTGTTCGTTTACATCGGATTGTACCCGAAATTGTTCCGGCTAATC
AAAGTTTATATAAATTAGAGAAGCAATCCGGCTCGGAATCGTTCCGACCTACCAATCCGA
CACAAACGAACAAGGCCTTAGGGTGATTTGGTGTTGCATAGATATTTTGTTTTGTCTGAG
AATTGTTGGTGCATTAGCATATATTTTATCTAGTTGTTCACAACATGCATTTGGAGCAGT
ATGAAGCTGGAATGCTGTGAAAAGGGAAATATTAGGATGTACCAGATTAGATGATCAAAT
ATGTGGGTATGCGATAGGCCAGAGTCAACTTAGAATTCTCCATGGACTGGCAAATATATT
TGAGATCAAATGAATTGGATTCACAGGTTATGCACATTTTTATTTTTACACACTTCTTGG
CCGGGCTTCCTATTTCATCTATAAGATGTGGTAATTGATATCTTATTGACTTGCTTATTT
CCAGTTTTTGTTTCTACATTGGACTGCTAGGCGCCATGGCAGAAATCACGGTTCACCTTT
TCCACTCTGTTTTTCCTTTGTACTGTATACAGGAGACACAGTAGTATTGTGGAGGCTTAG
ATTATATGTGATTAAGTGAGGTTAGAACATTATTCCTTTTTGTTCAAGAAAGATAATGTA
TATGATGAAACCAGTACCTACGCAAAAGAAGAAGGCACATACATTAGATGCAATTGCACA
ATGTCGTGAAAGCAGGATATGTGAACCCAGGATATCTTAACCTTTAGATTACAAAAAGAA
GTTGTATATGGTATTTTACATCTTCTGGTAAATCAAACGTACTTTTATGTATTTTTAGAT
TATGATGAAACTTTGAAATGTTTGATCTCTGTTCATGCTCATACTTTTGGCTGATACCTT
CTCTAGGATCATGTTAAACTCTTCTAGTGACTTAGGATTGTATCGTGCTTGTTTATGTTT
TACTTGAGGGGAAAGAAATCAAAACTTCATTCTGAAATGTTTCTAGAATGATGTTGTACC
TGAACAAGGTTGGTAGATAATTTATGCTTATATGTGTATTTCATGCAGGTGCAACACTTC
TCTTTTGATTGACTATTGCCAAGATGAACGTGCACATAAGTATATTATAATAGATGTTGG
GAAGACATTCAGAGAACAAGTTCTGAGATGGTTTGTTCGCCACAAAATCCCTTGCGTTGA
TTCTATTCTTCTGACTCATGAGCATGCAGATGCGATCTTGGGCCTTGATGATGTTCGGGT
CGTACAGCCATTTAGTCCCACAAATGATATTGATCCAACCCCAATTTATCTCTCTCAATT
CGCTATGGACAGCATCTGCCAAAAGTTCCCCTATTTGGTCAAAAAGAAATTAAAGGAAGG
GGAGGAGGTTAGACGAGTTGCTCAACTTGAATGGAAGATAATTGAGAGTGATATTCAGAA
ACCATTCACAACTTCAGGGCTAGAGTTTGTTCCCTTGCCGTTTTCTTAATCTGTATTGGT
ATCAGGTGATCCATGGTGAAGACTACATTTGTTTGGGTTTCCTTTTCGGAAGGAAATCAA
AAGTTGCTTACATATCAGATGTTTCACGGTTTCCCCCAAGCACAGAATATGGTACTTCTG
CTGTCTGCTAATGCTACTCTATTAGTTCTGCTTTTTAACCATCTTATGCTACCATGTTGC
CTATGCTTGATTTTTCTGGAATAAAGTTCGCAGTGATAGGAGTGTGCACCGTGGTGACTG
GTGACTCAGTCTAGGTTTTGGTTGAGATGAATTACCCTAGTAGAGAGGAAGAGGAAGATT
GAAGTTGACATGAGAAAAGGCAATAAAAGGAGACTTGAAAGGATGAGATATACCCAAAGA
TTTAACTTTAAATAGGAGTATGGAAACGATTATTCATGTGCCCAAACCTTAACTTGTGGG
TTCTATTGGGTTTTTAATTCTAGCCAACCCCAACTTGTTTGAGATAAAAGGCTTTGTTGT
TGTTGTTCCATGGTATTATGTGTTACCATCTCTGCTTGGTACTCACCATAATACATTGTT
CCCCTGCCGCAGAAAGTGATGATCAATATAGTACAAATATGATGATATTAATACTTAGAC
TTGCAAACTTATTCATGGGGTTTGGGAAATAAACATCTGTTTATATGTACTTCACAGATG
CATTGTGAGTGCTTTGCTTTGCTTTGCCTGTCCTTTTCCTTGACCTTAACAATCCATGCA
TGCATGCGCTGCTACATTATCTTTGCTGATTGTTTGAGAATAGCTGCAGGTTTTGTAGAT
TTATTGCGTGTTCTACCTTGTTTGATTGTACATGTACGTATGTTTCAGCAATTTCAAAAT
CTGGAGGAGGGCAACTTGATTTGCTCATCTTGGATTGCCTATACAGGGTTAGTTTCTTTA
GCTCTTTACGTTTTCTATGCTGTGTTTTCCATTTACTGCTGCTCATTATGTATTTGTTTC
TAGATTTACATATAAACTATGAAAAATTTAGTTTATTGAACCACAGCTCACTAGCCACCT
CAGATTACAGAATAAGGACAGATGTCTCTGAATATTGATAGGAACATACATGTAGAAATT
GGTAAACACCATTTCTCAAGATCTCTTTTGCTTGTAATCCTGAAATTGCAAAAGGGCCTC
TAGCTGAGTTGATTAGGTGGTATGAATCCTCAGGTCTTGAATTCGAATTCTAGTGGGAGC
GAATTTCAAGTTGAGGTTAAAAAATGTCACTCGCTGGTTCCCTTGGTAGTGTGCACACAA
GATAGACTGACCTATGGAGGCCGAATCCTCATGTAGGGGCTAAGGAGGACTCAAAGCACG
AGTAAAGATCTACCCTATAGGGGGGTGGACCCTCGTGCTACACGGGGGGGCAGGCAGCTT
TCTTGACCTTTCTCGGTTGGGGCTCCAATTGAGCTTCTTCTTAATATAATATCGTGGGAG
CGGTCTTTCCCCTACTGGCCGAGTTTGTAATCCAGAAATTGATGCGTGCACATAGTAGGA
AATCTTTAATTGCTGGTAATATTGTATGGACGACCATTTTTGTTTCTTGGGGGTGAACAT
TAATGTTTTTCATATAGCACAAGCATGATCTGTTGATTTTGCATCAAGCGTACAGCCCAC
GAGATTCTTGAAATCAATTTCAGAACATTGACTGACTGCAACAAATAGATGATATTGAAC
AACCAGTACTGTCCAGATAGTTTTTGGCTTTGGTTATGGAAGTAATTCTGCACTTTGCAA
AGTACTAGTTACATAGCAGTTGAGCTATCTTGTAATTCGGGGCAATACAATTGCTATTAT
TTAAGAACATGTGATCATTAGTTAGCAGTGTTATATTTCATTCTCGTCTTCACTAATTTG
TTGCATCTCTTGACATGTGAACAGACGGGTTCTCACAATGTGCACTTGTGTTGGGACCAG
TTTCCCTATTTCTTGTATATCCTGCATGCATGATTTATGCTCATATTAAGATCTTATGCA
GACACTAGATGCTGTTAGGAGGATTTGCCCCAAAAGAGCACTGCTTATTGGGATGACCCA
CGAGATGGATCATCACAAGGACAACCAAACATTGGAAGAATGGTCCAGGAGGTAAGGCCT
TCCTCCTAGATACCTTAGATGTGTGCAGACACAGGTTCATGTACCGAATAAGTTGACATG
AAGAACACAGGAAGATGGAAACACGATCTTATCATAGAAAGACACACATGACACATGTTC
ATTTACTGCTATTCGTTAAAAGCAGACGCTTTACTGTGCGTGCTCATGTCCTGTAATTTG
GAAACGCAGGGAGGGGATTGACGTGCAGTTAGCTCGTGATGGCTTGCGTGTCTACATTGA
TCTGTAGCCGTGAAAGGTACACGTCACTGCCTTTGTTTTGACTATATAGCGATAGGTCAC
ATTGCTTTGTTCATTATCATGGTCCGTTGGTCTAACAGTTCACTATCCAGCGTACCATGC
ATATGATGTTTGTCGGTTCACTGACAGTCTTCTACTCTTCGCTGTATATCAGGAAAATAT
GCCATACTCAGCGAACCGCGCCAGGCTTTCTGGCTGATGTAACATCCATTCCCACTTGTG
AAGAAAGTGCAAACTGACTAAAAAGGCGAGCCTATTTGGTGCATCATTTTACGTTTCGCT
AGTTTATACGTGAATCTCT