Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031018_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:173696155:173708327:1 gene:Zm00001d031018 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-like-specific protease 1D
Sequence	ATGTCTGACAGACTGAATGAACCAAAGATCTACTACCCATCAAGAGATGATCAAGAAGTT GTCGAGCTCACCAGATCTGATATCAGATGTCTTGATCCTGAAGTATTTTTGTCGTCACAG GTGATCAATTTCTACATCAAGTACATCAAAATGACCAGATTGTGCGATGAAAATTTCAGA GACAAATTCTACATATTTAACACATACTTCTATGGAAAGCTTGAGGAAGCATTGCGTCGG CCGCGTGACTTCCCAAAGTTGAGAAGGTGGTCGAAAGGTGTCAATATATTCAATAACGCA TACATCATCTTGCCGATCCATGGGAAGGAGCACTGGAGCTTGGTAATCATTTGCCTTCCT CCAAAAGAGAGGACTTCTTCAGAACCGATCATTATACTTCATCTGGACTCCTTAGGCATG CATCCCAGCACTAAGATCTTGAACACGGTTGGGAGGTACCTTGAAAAGGAGTGGCGCTTC TTATCCGTTGCATGGCCGTGTCTTCTGAATGATATACGCAAGGAAGCTGTCCAGGTTCCG CAGCAGAACAATGCGTACGACTGCGGTATCTTCATGCTGTATTACATTGAACAGTTTATA AAGAAGGCACCGGCAAGGTTCACCACCGATAAACTTGGCATGTTTAATCGCAGTTGGTTC AAGCCTGAAGAAGCATCCGGTCTAAGGCAGAGAATAAGAGAGCTACTGCTGCAAGAGTTT GGAAGTGCCAGGCCGGATGAAGCTGCATCAGAGGCAGATGTTGCTGCTAAGAGAAAAGAA GGCATCAGTGCTGCAGAGTGGAACGAGGAGGAGGCAGGCCGTGTCGTATCAGAATCAGAC TCATGTTCATACGGCGCCGGAGACGAAAAAGGTACAGTAAAGGCAGATTCTGGCAGCGCA GAAGCTGAGAAAGAAGGTGGGCTGGTTGTGACTGCATCATCGCAGAAAAGATCGAAGGGG ACGGCGGAGGAGGAGGAGGAGGTCCGTGGTAGTAGCATGCCAGTCCCGGATGCAGTTTGT GAGATCACTGGGACCAAGGTGTGGATCAAGAGGGTCTACAGACGAACAGGGTGGCCACCT GGAAATTGGTGCTGGAGCAGTGGCGGATCCAGCAGGGATGCACGCAGGGCGTTCATAGAA CAATTCTCTCGAAAGTAG

Peptide Sequence

PEP ID	Zm00001d031018_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:173696155:173708327:1 gene:Zm00001d031018 transcript:Zm00001d031018_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-like-specific protease 1D
Sequence	MSDRLNEPKIYYPSRDDQEVVELTRSDIRCLDPEVFLSSQVINFYIKYIKMTRLCDENFR DKFYIFNTYFYGKLEEALRRPRDFPKLRRWSKGVNIFNNAYIILPIHGKEHWSLVIICLP PKERTSSEPIIILHLDSLGMHPSTKILNTVGRYLEKEWRFLSVAWPCLLNDIRKEAVQVP QQNNAYDCGIFMLYYIEQFIKKAPARFTTDKLGMFNRSWFKPEEASGLRQRIRELLLQEF GSARPDEAASEADVAAKRKEGISAAEWNEEEAGRVVSESDSCSYGAGDEKGTVKADSGSA EAEKEGGLVVTASSQKRSKGTAEEEEEVRGSSMPVPDAVCEITGTKVWIKRVYRRTGWPP GNWCWSSGGSSRDARRAFIEQFSRK

Transcript Sequence

Transcript ID	Zm00001d031018_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:173696155:173708327:1 gene:Zm00001d031018 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-like-specific protease 1D
Sequence	TACACATCCCATAGGCGATCTACAAGTATACCAATCACACCACCCATAAAGAGAGTGTTA GTCCGTACAAGCCTTCTCCTACTACGTAAGATTACCCTTTGGGTTGACTTCGGATATTCA AAGGACTTGCATGGCAGAGAGCCATAGCATCACATTTGCCATCTCTTAAAGTTCACGCTA GAAAACTTCTTGGACCTCAGAGCATCAACAAATCTAGCTATAAAACCAAAATTCCTAGAA TAAGGTTTTTGGTTTGTTGGAGACATTTGGTTTTAATTTAATCCAAAAATAAAGCATAAC CATAACGACAAACATGTACATAAAGCAAATGGATCTAAACATGTGCATCATGTCAATCAA GATTAAAACATGAACTAGTAGAACTATGTCTAAACAGATTAGAAAAAACAACATGAAAGA CATGATGAGAGAGATGGTTGTACGTTTGTTCCTTGGTAGCGATGGGATAGAGAAGACAAT GTTGATGTTCAACACCATCTCGTTCTTGACAATGACGTGAAACATCCACGTGACGAGGAG GAAGACGAGTCGTGGCAACGCGGTTGAACACGACGAGGAAGCGATCGAGCAGTCACATGG ATTGCTTCCCAAAAACCTAATTCACCCTCTCCCGATGTTGGATTGCTGAGGATGACAGGA CCTGAGACCTGATGACCTGTTTGTCGGTGTGTGGCGATGATCGAGATGAAGTAGCGTACG TGGCGATATAGTAGGCAGGAAGCCACAAGACTAGATGTGATGACTACTACTGTGTGATTT GATGACAACACTCGTAGGTATTTATCGGAGGAAACCACATTCGATTTCAAAAAAAATCCG CACCAAATAATAAGGATTCACATCATATAAGATAAGGATTCACACCAGATAAGGCTTCGG CCTGCCCGGTCTAGCGAGGCGAGCGACCTTCTACCTCTCTCCCAACATATACGAGACCAT GTAAAACTCTCCACCTCAATTAGAAATATAAGAATGTTTCCACACTCCTCTAAATATTGA CATGCATCTCTTCATGAATGGACATTTGAGATTTTTCTAGAAATTATTCTAAAATTAAAA TAATTCCAACAATTATCACGCATGCTATGCAGCAAGCGTGTTTGCATATGGTCGACCCCC AAAGAGCATTATTTTTATGTACTCAAGAGAATACTGCTGTGATACGTGAAAGGCTGGCAC CCCATGGTCTTCAGCTCTCTCGTTGCTCTATCAACACCCTCACAGTGTACTCCTATGTTG ATTGAGCCAGTTGTCTGGATACACGACGACCCACATCTGGTTAGGCTATCTATAGTAGAT CCTGTATCACAACTTCTATTTTAAACTTCTTTTTATAAATAGTGTCAAACAATGTTATTT ATAATTCTACGTTCTCTATTTTACATAGTCCACTGGAGACAGTTTTATTGTATTTTAATT TCTTGGTGAGAAGAGAACCTCATTCATTGCTCTTCTAAATGACAACATTCAGTGCCTTGC TCCATTAAGAAAACCGAGTACAATGGGGGTTGTCAAGTGTCAACGTTATCGCCGAAGTTT GCTGGTTGGGCCAGCTGCTCACTAAAGTCTGTCGTCCTCTACAGAAATCTACATTTGTCT ACAGTGACAACGAAAGTGCAGTTCTCTGCGCAGATCCGGCGCAACATTCCAATCTTAACC AAAGGGTTTTCTACTCTTAACCGAGTCCACTCTACTCCCGATTGACACCACGGAGGCTGT TATACGAGCATCTCTAACAATACCTCAAACTAGTGCCACAAATTTAAATATAGGGCTCTA TACAGGAATCTCTAACAATACCTCAAACTAGTGCCACAAATTTAAATATAGGGCTCTATA CAGGAAAAATTACTCCAACAGGCAACAGTGTCTTATTTTATAAAATTTGATCAAAAAATT ATAGGGCACCTTCTCAAGTGCCTCAAATATACTACACCGTAGTGGGCTGTCCTATAATCT AGATTTAGGGCTTTAATGTTGGAGTGGAGTGTTTTGTTGGTGCCCTAAATTCTATAAAAT ATATTCATTTTAAATTATTGGGCATTTTTATATGTCACGTTGTTGGAGATGCTCTAATGG CATTGTCAGTATTTTCCAATCTCCGTCATTAATGATTGGTTCTAAGACTGTCTCCAGTAG GCAGTGTAAAATAGGGACGTAAAATTGTAGATGACATTATTTTACACTATTTGTAGAGTA AAGTTTAAAATATAAAATGAGATAGAGATGGGGATGTGATAGGGGATCTGCTAGAGATGG CCTAAGAGCATGTACAACCCTAAACACTTGAATCGATTTTTCAATTATAAGAGACAACTA AAAGACTACATAATATAACTCTGAGTCTTTAGATCATAAATGCAGTTAAGACATAATATG TATAGAGATTCGTGCTTGTTTTTTGTCACTTAGCTCTTTAGAGGCCACTCGTTTAATTGG GTTTGTACATACCCTGATAGAAGATCATATCTGCATGCCTGTATTAATATTAGGCTAGGT TAGAGGATAACTTTGATTCTTTCCTTGTATGTACACTCACTGGTGCATAAGAACGGCCTA CAACAATAATAGAGAATTTATTCTTCCTATCTTAATTAAGCTATACCAAGAAGAGTACTT TGGGAATACTAATTTAATTTCTTCATCTTCCATGTTTTCCTGTTGCTTGAATGTTGAAGT CACACTATCCTCATTTTGGATGAACTGCTAAATTTGAAAACTATATTATCTTGCATTTCA GTGCAATCCTATCGCATGCAACACGTTGTTCAGTGGTCATGAGAACAAAAGAGATCGTAT AGTGAGTTGCTGTTTACCTCCAAGGACATTTCTTTGCATTATTGATGGCTTGATACCGCT ATACATTCCATTGACAACTTACCATGTGGACATTTCTTAGCATTATTTGAATACATTCCA TTCCATTGACAAAATTTTACAAAATTAGTAATTTAAACTAGATTTTCACCATATATGCAC CCCTACCAGTTGTTATCATGCGCTCTTAAGCTATTTGCACCCTCATCTCTCATCTGGTTC ACATTGTCATGAGCCAGGCCGTTTACTGGGCGCTCTACCATGCTTTCTCATAGTACTTTG ATCATGTTACCACTTTTACATGTAAGTTTGACCTTATACATTTATTTATATGAGTTGACT TTAAGGTTCAAGATGTGGTTCTATTGGATGATGAAGATATCGAACCTAAGGAAGAAGTAA AACTTGAGATGTCTGACAGACTGAATGAACCAAAGATCTACTACCCATCAAGAGATGATC AAGAAGTTGTCGAGCTCACCAGATCTGATATCAGATGTCTTGATCCTGAAGTATTTTTGT CGTCACAGGTGATCAATTTCTACATCAAGTACATCAAAATGACCAGATTGTGCGATGAAA ATTTCAGAGACAAATTCTACATATTTAACACATACTTCTATGGAAAGCTTGAGGAAGCAT TGCGTCGGCCGCGTGACTTCCCAAAGTTGAGAAGGTGGTCGAAAGGTGTCAATATATTCA ATAACGCATACATCATCTTGCCGATCCATGGGAAGGAGCACTGGAGCTTGGTAATCATTT GCCTTCCTCCAAAAGAGAGGACTTCTTCAGAACCGATCATTATACTTCATCTGGACTCCT TAGGCATGCATCCCAGCACTAAGATCTTGAACACGGTTGGGAGGTACCTTGAAAAGGAGT GGCGCTTCTTATCCGTTGCATGGCCGTGTCTTCTGAATGATATACGCAAGGAAGCTGTCC AGGTTCCGCAGCAGAACAATGCGTACGACTGCGGTATCTTCATGCTGTATTACATTGAAC AGTTTATAAAGAAGGCACCGGCAAGGTTCACCACCGATAAACTTGGCATGTTTAATCGCA GTTGGTTCAAGCCTGAAGAAGCATCCGGTCTAAGGCAGAGAATAAGAGAGCTACTGCTGC AAGAGTTTGGAAGTGCCAGGCCGGATGAAGCTGCATCAGAGGCAGATGTTGCTGCTAAGA GAAAAGAAGGCATCAGTGCTGCAGAGTGGAACGAGGAGGAGGCAGGCCGTGTCGTATCAG AATCAGACTCATGTTCATACGGCGCCGGAGACGAAAAAGGTACAGTAAAGGCAGATTCTG GCAGCGCAGAAGCTGAGAAAGAAGGTGGGCTGGTTGTGACTGCATCATCGCAGAAAAGAT CGAAGGGGACGGCGGAGGAGGAGGAGGAGGTCCGTGGTAGTAGCATGCCAGTCCCGGATG CAGTTTGTGAGATCACTGGGACCAAGGTGTGGATCAAGAGGGTCTACAGACGAACAGGGT GGCCACCTGGAAATTGGTGCTGGAGCAGTGGCGGATCCAGCAGGGATGCACGCAGGGCGT TCATAGAACAATTCTCTCGAAAGTAGTTAGAACTAAGAGCACAGATGTTGGTTTGCTATC CTGAGGCGCCTGTTGTTGACACTGGCTAGACGATGCTTCCAGGTCGGTCGGGCACCTGCA GTTGTCATCAACCTCTCGATAAACCGATAACTTTAGCAAGTGCTGCATATACTCCTGCAA GTGCTGCATTTTGTTTTTTATAATGGAAACAAGAGTTCCAGC