Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d031013_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:1:173397083:173402763:1 gene:Zm00001d031013 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methylcrotonoyl-CoA carboxylase subunit alpha
Sequence	ATGGGCGATAAGAGTGCATCCAAGAGGATCATGGGTGCTGCTGGCGTGCCGCTGGTTCCA GGGTACCATGGGGCTGACCAGGACGTTGAGCTGTTGAAACTCGAAGCGGATAAAATCGGT TATCCTGTTTTAATCAAACCCACCCATGGTGGAGGGGGCAAGGGGATGAGAATAGTCGAA AGGCCTGATGAATTTGTGGATTCTGTACTGAGCGCTCAACGGGAAGCTGCAGCATCGTTT GGTGTAAACACACTATTGATTGAGAAGTATATTACTCAACCAAGACACGTAGAAGTCCAG GTATTTGGCGACCAACATGGAAATGCGATATACCTTTATGAGAGAGACTGCAGTCTACAG AGAAGGCATCAGAAGATCATCGAGGAAGCTCCAGCTCCAAATGTGCCAGCTGAGTTTCGG TCTCATATTGGTGGAGCTGCTGTATCTGCAGCAAAGGCAGTTGGTTACTACAATGCTGGA ACAGTGGAGTTTATTGTGGACACTCTTTCTGGAGAGTTCTACTTCATGGAGATGAATACT CGACTCCAGGTTGAACACCCAGTGACAGAGATGATTGTTGGTCAAGATCTTGTGGAGTGG CAAATACGTGTTGCGAATGGAGAACGACTACCATTATCTCAGGAGCAGGTTCCATTAAAT GGACATGCATTTGAAGCACGGATATATGCTGAAAATGTTCCAAGAGGGTTTCTCCCTGCA ACAGGAACCTTACATCACTACCGACCAGTCCCTTCTGACCCAACTGTAAGAGTTGAAACT GGAGTCGAAGAAGGAGATACCGTCAGCATGCATTATGATCCAATGATAGCCAAACTTGTA GTATGGGGTGAAAGTCGCACGGCTGCACTAGTCAAGCTAAAGAAGTGTTTATCAACCTTT CAGATTGCAGGTTTGCCAACCAATGTTGATTTCCTCCAAGAACTCGCAAGCCACAGTGCC TTTGAAAAAGGCCTAGTTGACACTCACTTCATTGAACGTTATAAAGATGACCTTTTGAGT ATTTCTACAAAGTCCTCAAAAGAATCTCATGGTGTAGCTGAGCTTGGTGCAATTTTGGCT GCTGCATGCATTTGCAAGAAGGAACACATTACATCTAAAGAATCACTACGAGCCAACAAG TCACTATCTGTATGGTACAATAATCCACCTTTCAGGATGCATCACTTTGCTAGGCATCCC CTGGATCTTGAGTTGGAAGAGAATGATGGATTCAGTGAGAAACTTCTTAAACTGTTCATT ACTCATAAGTTTGATGGAAGCTACTTCATCGAGACAGAAGATGGCACTTCTGGTTTAGAT GTCAAAGTTGATCACAAGGGTGACCACGATTTTCGTGTGGATGTTTCTGGTCTGCAAACT GATGTGACTCTAGCATCTTATTCAAAGGGAAACAGCAAACACATACATGTCTGGCATGGG AATCATCACCACCATTACAGACAGACTGTAAGAGCTGAGCATGCAGTTGAAGATAGCTCC CAACCTAGTCATGCTTCTGAAGGGAAGTCGCATCCAAAAGGGAGTGTTCTGGCACCGATG GCTGGCTTGGTTGTGAAAGTTTTGCTTGAAGACGGGGCTCAGGTGGACGCAGGGCAGCCT GTCATGGTTATGGAAGCAATGAAGATGGAGCATGTTGTGAAGGCGCCTCGTGCCGGATAC GTGAGTGGCCTGAAGGTTACTGCAGGCCAACAAGTTTTTGACTCCAGTGTCCTTTTCACA ATCAAGGACAGCTCTGCAAACTGA

Peptide Sequence

PEP ID	Zm00001d031013_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:1:173397083:173402763:1 gene:Zm00001d031013 transcript:Zm00001d031013_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methylcrotonoyl-CoA carboxylase subunit alpha
Sequence	MGDKSASKRIMGAAGVPLVPGYHGADQDVELLKLEADKIGYPVLIKPTHGGGGKGMRIVE RPDEFVDSVLSAQREAAASFGVNTLLIEKYITQPRHVEVQVFGDQHGNAIYLYERDCSLQ RRHQKIIEEAPAPNVPAEFRSHIGGAAVSAAKAVGYYNAGTVEFIVDTLSGEFYFMEMNT RLQVEHPVTEMIVGQDLVEWQIRVANGERLPLSQEQVPLNGHAFEARIYAENVPRGFLPA TGTLHHYRPVPSDPTVRVETGVEEGDTVSMHYDPMIAKLVVWGESRTAALVKLKKCLSTF QIAGLPTNVDFLQELASHSAFEKGLVDTHFIERYKDDLLSISTKSSKESHGVAELGAILA AACICKKEHITSKESLRANKSLSVWYNNPPFRMHHFARHPLDLELEENDGFSEKLLKLFI THKFDGSYFIETEDGTSGLDVKVDHKGDHDFRVDVSGLQTDVTLASYSKGNSKHIHVWHG NHHHHYRQTVRAEHAVEDSSQPSHASEGKSHPKGSVLAPMAGLVVKVLLEDGAQVDAGQP VMVMEAMKMEHVVKAPRAGYVSGLKVTAGQQVFDSSVLFTIKDSSAN

Transcript Sequence

Transcript ID	Zm00001d031013_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:173397083:173402763:1 gene:Zm00001d031013 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methylcrotonoyl-CoA carboxylase subunit alpha
Sequence	GCCATGAATTTGCTTTGTGCAGGCTATCCACCCGGGATACGGTTTCCTTTCAGAGAGTGC TGATTTCGCGCAGCTCTGTGAAGCCGAGGGGCTCAAATTCATTGGACCACCAGCATCTGC AATCCGAGACATGGGCGATAAGAGTGCATCCAAGAGGATCATGGGTGCTGCTGGCGTGCC GCTGGTTCCAGGGTACCATGGGGCTGACCAGGACGTTGAGCTGTTGAAACTCGAAGCGGA TAAAATCGGTTATCCTGTTTTAATCAAACCCACCCATGGTGGAGGGGGCAAGGGGATGAG AATAGTCGAAAGGCCTGATGAATTTGTGGATTCTGTACTGAGCGCTCAACGGGAAGCTGC AGCATCGTTTGGTGTAAACACACTATTGATTGAGAAGTATATTACTCAACCAAGACACGT AGAAGTCCAGGTATTTGGCGACCAACATGGAAATGCGATATACCTTTATGAGAGAGACTG CAGTCTACAGAGAAGGCATCAGAAGATCATCGAGGAAGCTCCAGCTCCAAATGTGCCAGC TGAGTTTCGGTCTCATATTGGTGGAGCTGCTGTATCTGCAGCAAAGGCAGTTGGTTACTA CAATGCTGGAACAGTGGAGTTTATTGTGGACACTCTTTCTGGAGAGTTCTACTTCATGGA GATGAATACTCGACTCCAGGTTGAACACCCAGTGACAGAGATGATTGTTGGTCAAGATCT TGTGGAGTGGCAAATACGTGTTGCGAATGGAGAACGACTACCATTATCTCAGGAGCAGGT TCCATTAAATGGACATGCATTTGAAGCACGGATATATGCTGAAAATGTTCCAAGAGGGTT TCTCCCTGCAACAGGAACCTTACATCACTACCGACCAGTCCCTTCTGACCCAACTGTAAG AGTTGAAACTGGAGTCGAAGAAGGAGATACCGTCAGCATGCATTATGATCCAATGATAGC CAAACTTGTAGTATGGGGTGAAAGTCGCACGGCTGCACTAGTCAAGCTAAAGAAGTGTTT ATCAACCTTTCAGATTGCAGGTTTGCCAACCAATGTTGATTTCCTCCAAGAACTCGCAAG CCACAGTGCCTTTGAAAAAGGCCTAGTTGACACTCACTTCATTGAACGTTATAAAGATGA CCTTTTGAGTATTTCTACAAAGTCCTCAAAAGAATCTCATGGTGTAGCTGAGCTTGGTGC AATTTTGGCTGCTGCATGCATTTGCAAGAAGGAACACATTACATCTAAAGAATCACTACG AGCCAACAAGTCACTATCTGTATGGTACAATAATCCACCTTTCAGGATGCATCACTTTGC TAGGCATCCCCTGGATCTTGAGTTGGAAGAGAATGATGGATTCAGTGAGAAACTTCTTAA ACTGTTCATTACTCATAAGTTTGATGGAAGCTACTTCATCGAGACAGAAGATGGCACTTC TGGTTTAGATGTCAAAGTTGATCACAAGGGTGACCACGATTTTCGTGTGGATGTTTCTGG TCTGCAAACTGATGTGACTCTAGCATCTTATTCAAAGGGAAACAGCAAACACATACATGT CTGGCATGGGAATCATCACCACCATTACAGACAGACTGTAAGAGCTGAGCATGCAGTTGA AGATAGCTCCCAACCTAGTCATGCTTCTGAAGGGAAGTCGCATCCAAAAGGGAGTGTTCT GGCACCGATGGCTGGCTTGGTTGTGAAAGTTTTGCTTGAAGACGGGGCTCAGGTGGACGC AGGGCAGCCTGTCATGGTTATGGAAGCAATGAAGATGGAGCATGTTGTGAAGGCGCCTCG TGCCGGATACGTGAGTGGCCTGAAGGTTACTGCAGGCCAACAAGTTTTTGACTCCAGTGT CCTTTTCACAATCAAGGACAGCTCTGCAAACTGAGATGGAGCGATCACTGCCCTAGAGTA GTTGCACTGCAACTGCATCAAGCACCCAGCGGATGCTCGTCCAGATAGAGAAGCGAAGGA AATAAACTGCTGGGTTCGTCTGCGGGCAATCCAATCCGGCAGGGCAAGCAGACGGCGCAT GGTGTTTCCCGGCTTGATGCGAATCCATCATCCGCCGCAACAATTCCATTGCGTAGTGTA CACGAACATGAAACTGTACCACGCTGAGCAAGAGGAATTCTTGTTTGATTTGTGCAATGA AATAAGTTGATTCCATCACCGTTCCATTTCTCATAATTAGTAATAATAATGAATAATTAG TAATAATATAATGAGGAATGTGTTTATTTTACCAATTTTATGGAATGGACTCGTGATGT