Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d030999_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:172720285:172725171:-1 gene:Zm00001d030999 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase Nek1
Sequence	ATGGATCAGTATGAGGTGCTGGAGCAGATTGGGAAAGGAGCATTTGGTTCTGCACTCTTG GTGAGGCACAAGGCCGAGAAGAAGAAGTATGTGCTCAAGAAGATACGGCTCGCGCGGCAG ACCGACCGCACACGCCGGTCTGCCCACCAGGAGATGCAGCTCATCGCGACGGTCCGGAAT CCGTTCATTGTGGAGTACAAAGATTCATGGGTGGAAAAGGGTTGCTACGTTTGCATTGTC ATCGGTTACTGCGAGGGAGGAGACATGGCTGAAGCTATCAAAAAAGTCAATGGAAACCAT TTCTCGGAGGAGAAACTTTGCAAGTGGCTTGTGCAACTTCTCATGGCTCTCGATTATCTG CACGCAAATCACATTCTTCATCGGGATGTGAAGTGCTCCAATATATTTATTGCCAGAGAT CAAAGCATACGCCTTGGTGACTTTGGTCTTGCGAAAATATTGACTTCGGATGATCTTGCA TCCTCTGTGGTAGGAACACCAAGCTACATGTGCCCAGAACTTCTTGCCGACATACCGTAT GGTACTAAATCTGATATTTGGTCTCTAGGATGTTGTATTTATGAAATGGCAGCTCTCAGA CCAGCATTTAAAGCCTTTGACATGCAAGCCCTCATTAGCAAGATCACAAAGTCGATAGTA TCGCCGTTGCCCACGAGATATTCTGGTTCCTTTAGGGGACTCATCAAGAGCATGCTACGG AAAAGCCCAGAACACCGACCAAGCGCTGCAGAACTGCTGAAGCACCCACACCTCCAGCCA TACGTGCTGCAGGTCCAGCTGAAGTCCAGCCCCTCTCGCACCACGTCCCCAATCTACCAA GCTCTGACGGACAAAGTGAAGAAGATGACGTTCGTGAGCGACACCGCCGATTCCGCGAGG AGGAGGGCTGCGAGACGGAGCTCTCTGGGGAGCGAGAGGACCGTGACGTTCTGCAAGCCA TCCCCCGAGCGCAACTCCGTCAGCTCCACGCGGAGCATCAAGGAGTACACGACGACGACC CAGAGTGCCAGGGAGCTCTCTGTCGGCAGCAGCCTGCAGGTCGACGACGAGGTCACGAGT AAGGCTGTTGTGACGAAGACGGCAGGCGTTCTACGGACTCCCAGCAAGAGCCGTGCTCCG GCATCTAAGACGTTGGTGGCGGCTAGAAGCCGGCTGGATCCTCCGAAGACGTCCTATGCC AGAACGAACCGTGCCGAGTTGGACTCAAGGACGCCTCTGAGCAAGAGCAGCGCGCGGACG GCAAGGAGAGCATCCCTCCCGCTGGCGGCGTACAGAGCACCCAGCGGCGGCCGCGCCGGT AGCTTCCTGGAGCAGCTGGACTCGCCGGACGTGTCCGTGAACGCGCCGCGGATCGACAGG ATCGCGGAGTTCCCCCTAGCCTCGTCCGAGGAGCCCCTGGCGCCCATGAACAAGAAGCTG TCCTGCTCCACGCCTCCCTTCAGCACCCGGTCCATCACGAAGGACAAGTACACGGTGCAG GCGGTGGCGCCGCGCGCGGGCGACGGGGACACCGCCGCGAGCGACTCGTCGGGGCGCAAC GCCACGGCTGCGTCCAGCCGTGGGTCCAGCGACTCGTCGTCGAGGCAGCAGCAGCATCAC TTGCAGCAGCGGTTCGACACGTCGTCGTACCAGCAGCGCGCCGAGGCGCTGGAGGGCCTG CTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGCGGTACGAGGAGCTTGGCATCCTGCTG AAGCCGTTCGGCCCCGAGATGGCTTCCCCCCGGGAGACAGCCATCTGGCTCACCAAGAGC TTCAAGGAGACGGCGCCGTCGTAG

Peptide Sequence

PEP ID	Zm00001d030999_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:172720285:172725171:-1 gene:Zm00001d030999 transcript:Zm00001d030999_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase Nek1
Sequence	MDQYEVLEQIGKGAFGSALLVRHKAEKKKYVLKKIRLARQTDRTRRSAHQEMQLIATVRN PFIVEYKDSWVEKGCYVCIVIGYCEGGDMAEAIKKVNGNHFSEEKLCKWLVQLLMALDYL HANHILHRDVKCSNIFIARDQSIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPY GTKSDIWSLGCCIYEMAALRPAFKAFDMQALISKITKSIVSPLPTRYSGSFRGLIKSMLR KSPEHRPSAAELLKHPHLQPYVLQVQLKSSPSRTTSPIYQALTDKVKKMTFVSDTADSAR RRAARRSSLGSERTVTFCKPSPERNSVSSTRSIKEYTTTTQSARELSVGSSLQVDDEVTS KAVVTKTAGVLRTPSKSRAPASKTLVAARSRLDPPKTSYARTNRAELDSRTPLSKSSART ARRASLPLAAYRAPSGGRAGSFLEQLDSPDVSVNAPRIDRIAEFPLASSEEPLAPMNKKL SCSTPPFSTRSITKDKYTVQAVAPRAGDGDTAASDSSGRNATAASSRGSSDSSSRQQQHH LQQRFDTSSYQQRAEALEGLLEFSAQLLQQERYEELGILLKPFGPEMASPRETAIWLTKS FKETAPS

Transcript Sequence

Transcript ID	Zm00001d030999_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:172720285:172725171:-1 gene:Zm00001d030999 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase Nek1
Sequence	CTCGCTCCCTCCCCTCCCTCCCTTCCTCCTTTCCCACCCTTCTCTCTCTCTAGCCGCCGT GCTCTCCTTTTCTATCTCCACGGCAGGCTTCTCCCTCCCTCCCCCTCATCCCCATTGCCT TTGGGAGGCTATATAGGGCGGGACTGGACTGGATTGGATTGGAAAGGGAGCTCCCGGCGA GTTTGAACCCACCCCACCCCACTTTTCTCGCCTCGTCCCCTCGCGCTTCCCGCCGCCGAC GCCGCGTCTATCTGGTCTAGGACCAAATGCCGCGAGATCTTCGCGCGTGACGCCGTCCCC CCCGCCGGAGCCGCCCTCCGAGCTCCGGGCCACGGAGCGCTTCGTCCCGGATCTCTCTGG TGGCTCAGGACAGTAGAAAGGAAAGGAGAAAAGCTTGTTGTGTCTGTGTGTGAGCTGCAG ACCCCGAGAGGATGGATCAGTATGAGGTGCTGGAGCAGATTGGGAAAGGAGCATTTGGTT CTGCACTCTTGGTGAGGCACAAGGCCGAGAAGAAGAAGTATGTGCTCAAGAAGATACGGC TCGCGCGGCAGACCGACCGCACACGCCGGTCTGCCCACCAGGAGATGCAGCTCATCGCGA CGGTCCGGAATCCGTTCATTGTGGAGTACAAAGATTCATGGGTGGAAAAGGGTTGCTACG TTTGCATTGTCATCGGTTACTGCGAGGGAGGAGACATGGCTGAAGCTATCAAAAAAGTCA ATGGAAACCATTTCTCGGAGGAGAAACTTTGCAAGTGGCTTGTGCAACTTCTCATGGCTC TCGATTATCTGCACGCAAATCACATTCTTCATCGGGATGTGAAGTGCTCCAATATATTTA TTGCCAGAGATCAAAGCATACGCCTTGGTGACTTTGGTCTTGCGAAAATATTGACTTCGG ATGATCTTGCATCCTCTGTGGTAGGAACACCAAGCTACATGTGCCCAGAACTTCTTGCCG ACATACCGTATGGTACTAAATCTGATATTTGGTCTCTAGGATGTTGTATTTATGAAATGG CAGCTCTCAGACCAGCATTTAAAGCCTTTGACATGCAAGCCCTCATTAGCAAGATCACAA AGTCGATAGTATCGCCGTTGCCCACGAGATATTCTGGTTCCTTTAGGGGACTCATCAAGA GCATGCTACGGAAAAGCCCAGAACACCGACCAAGCGCTGCAGAACTGCTGAAGCACCCAC ACCTCCAGCCATACGTGCTGCAGGTCCAGCTGAAGTCCAGCCCCTCTCGCACCACGTCCC CAATCTACCAAGCTCTGACGGACAAAGTGAAGAAGATGACGTTCGTGAGCGACACCGCCG ATTCCGCGAGGAGGAGGGCTGCGAGACGGAGCTCTCTGGGGAGCGAGAGGACCGTGACGT TCTGCAAGCCATCCCCCGAGCGCAACTCCGTCAGCTCCACGCGGAGCATCAAGGAGTACA CGACGACGACCCAGAGTGCCAGGGAGCTCTCTGTCGGCAGCAGCCTGCAGGTCGACGACG AGGTCACGAGTAAGGCTGTTGTGACGAAGACGGCAGGCGTTCTACGGACTCCCAGCAAGA GCCGTGCTCCGGCATCTAAGACGTTGGTGGCGGCTAGAAGCCGGCTGGATCCTCCGAAGA CGTCCTATGCCAGAACGAACCGTGCCGAGTTGGACTCAAGGACGCCTCTGAGCAAGAGCA GCGCGCGGACGGCAAGGAGAGCATCCCTCCCGCTGGCGGCGTACAGAGCACCCAGCGGCG GCCGCGCCGGTAGCTTCCTGGAGCAGCTGGACTCGCCGGACGTGTCCGTGAACGCGCCGC GGATCGACAGGATCGCGGAGTTCCCCCTAGCCTCGTCCGAGGAGCCCCTGGCGCCCATGA ACAAGAAGCTGTCCTGCTCCACGCCTCCCTTCAGCACCCGGTCCATCACGAAGGACAAGT ACACGGTGCAGGCGGTGGCGCCGCGCGCGGGCGACGGGGACACCGCCGCGAGCGACTCGT CGGGGCGCAACGCCACGGCTGCGTCCAGCCGTGGGTCCAGCGACTCGTCGTCGAGGCAGC AGCAGCATCACTTGCAGCAGCGGTTCGACACGTCGTCGTACCAGCAGCGCGCCGAGGCGC TGGAGGGCCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGCGGTACGAGGAGCTTG GCATCCTGCTGAAGCCGTTCGGCCCCGAGATGGCTTCCCCCCGGGAGACAGCCATCTGGC TCACCAAGAGCTTCAAGGAGACGGCGCCGTCGTAGCCGTGGGACGAGCGGGAGGAAGGGG TAGGGGTAGGTAGGTAGCTGCCAGTTTTGTAACGTGCGATGTACTACTAGCTCAGGTAGT TTAAGCTAATGTTAGGACATAAAAGTTCTCGTGTTGTATTAGCTATTCTCCAGTTTCCAG TAGGAATTCGAGCGATCAGTGGTAGCATTAGAGAGGACACTGCAAGCTGAGCCCAGGATC TGGCAAAGATCTTGAAACCTTGATGTATCGAATCATGTGTCACTTGCAATGCAATGTGTG TATGTAGTACGT