Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030982_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:171818565:171823290:1 gene:Zm00001d030982 gene_biotype:protein_coding transcript_biotype:protein_coding description:ankyrin repeat family protein
Sequence

ATGCCTGCGCTCTCCGACGTCGCGCTTCAGGCTGCCATCGCCGGCAACCTCCGCCTCCTG
AAGCTGGTGGCGAGCAAGATGAATCTGCGCGAAGCGAAGGACGCCGCTGGGCGGAACGCG
CTCCACCTGGCCGCGGAGATGGGCCGTCTTGAGGTTTGCAGGTTCCTGGTGGAGGAATCG
GGCTTCGAGGTGAACTTCGCCTGCGCCGAAGGTGCTGCCGCTGCCATTGCTGGAATCTTG
CGCCTTGGGGGAGGCAGGACGGTGCCAAGTACTATCAGGCAGCGTTCTGTCACTGAGATT
CTACCCTTGTATTATTGTGTAATAGGCGGGTCGCCGGTCCACTGCGCCGCGGCCGGGGGC
AGCGAGAGCGTCTTGGGCTACCTTCTCGACCACGGTGGCGACCCTGTGATGCCGGACTCC
ATGGGCTCCACTCCACTGCATGATGCGGCAGAGGAAGGGCATTGTGCGGCTGTGAGGATG
CTGCTGTCCAAGGGTGTCGATGTGGATCCACACGGCTGTCGTGGGACGCCGCTGCACTTG
GCCTGCTCCAATGACCGGGATCAGGTTGTTAGGATCCTGCTGGAACATGGCGCAGATGCT
GGTGCGGATGTGAACTTGATTGCTCCTTCTGGAGTAATTTTGGCTCAGGCAGTTTGTGAT
GGGTCAACTGAGATTGTCAAGTTTTTGCTAGAGGTTGGAGCTGATCCTAACATTCCTGAT
GAGGATGGGAAAATCCCGATCATGTACCCAGCATTTAATGGGCATCGGGAGCTTGTTGAA
ATTCTATTTCCTAAGACAAGACCAGTTTCATCTTTGCCAGACTGGAGCGTTGATGGGATT
ATTAGAAGTATGAAAGATCTGTTTTTCAAGCCTCAGGATGCAGCTGTGGTGGAAAAAAAG
ATAGCTGATGCGAAGTCACAAGGGAAGGAAGCTTTCGCAAGGGGAGAGTACCCTGCAGCA
GTATACTTCTATACCATGGTAAATGCTTGA

Peptide Sequence

PEP ID

Zm00001d030982_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:171818565:171823290:1 gene:Zm00001d030982 transcript:Zm00001d030982_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:ankyrin repeat family protein
Sequence

MPALSDVALQAAIAGNLRLLKLVASKMNLREAKDAAGRNALHLAAEMGRLEVCRFLVEES
GFEVNFACAEGAAAAIAGILRLGGGRTVPSTIRQRSVTEILPLYYCVIGGSPVHCAAAGG
SESVLGYLLDHGGDPVMPDSMGSTPLHDAAEEGHCAAVRMLLSKGVDVDPHGCRGTPLHL
ACSNDRDQVVRILLEHGADAGADVNLIAPSGVILAQAVCDGSTEIVKFLLEVGADPNIPD
EDGKIPIMYPAFNGHRELVEILFPKTRPVSSLPDWSVDGIIRSMKDLFFKPQDAAVVEKK
IADAKSQGKEAFARGEYPAAVYFYTMVNA

Transcript Sequence

Transcript ID

Zm00001d030982_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:171818565:171823290:1 gene:Zm00001d030982 gene_biotype:protein_coding transcript_biotype:protein_coding description:ankyrin repeat family protein
Sequence

ACTCTCCTCGCGTTTCCCGCCATTAACTCTGCAACCTATTCTCTTCCTCGCGAAACCGCT
TCCTTCGATTCATTCCCCCTCTCCCCTCTCCAAGACCCAAAACCCTAACCCCTACGACCC
CCGTGACCGCCGCCGCCGTCGATGCCTGCGCTCTCCGACGTCGCGCTTCAGGCTGCCATC
GCCGGCAACCTCCGCCTCCTGAAGCTGGTGGCGAGCAAGATGAATCTGCGCGAAGCGAAG
GACGCCGCTGGGCGGAACGCGCTCCACCTGGCCGCGGAGATGGGCCGTCTTGAGGTTTGC
AGGTTCCTGGTGGAGGAATCGGGCTTCGAGGTGAACTTCGCCTGCGCCGAAGGTGCTGCC
GCTGCCATTGCTGGAATCTTGCGCCTTGGGGGAGGCAGGACGGTGCCAAGTACTATCAGG
CAGCGTTCTGTCACTGAGATTCTACCCTTGTATTATTGTGTAATAGGCGGGTCGCCGGTC
CACTGCGCCGCGGCCGGGGGCAGCGAGAGCGTCTTGGGCTACCTTCTCGACCACGGTGGC
GACCCTGTGATGCCGGACTCCATGGGCTCCACTCCACTGCATGATGCGGCAGAGGAAGGG
CATTGTGCGGCTGTGAGGATGCTGCTGTCCAAGGGTGTCGATGTGGATCCACACGGCTGT
CGTGGGACGCCGCTGCACTTGGCCTGCTCCAATGACCGGGATCAGGTTGTTAGGATCCTG
CTGGAACATGGCGCAGATGCTGGTGCGGATGTGAACTTGATTGCTCCTTCTGGAGTAATT
TTGGCTCAGGCAGTTTGTGATGGGTCAACTGAGATTGTCAAGTTTTTGCTAGAGGTTGGA
GCTGATCCTAACATTCCTGATGAGGATGGGAAAATCCCGATCATGTACCCAGCATTTAAT
GGGCATCGGGAGCTTGTTGAAATTCTATTTCCTAAGACAAGACCAGTTTCATCTTTGCCA
GACTGGAGCGTTGATGGGATTATTAGAAGTATGAAAGATCTGTTTTTCAAGCCTCAGGAT
GCAGCTGTGGTGGAAAAAAAGATAGCTGATGCGAAGTCACAAGGGAAGGAAGCTTTCGCA
AGGGGAGAGTACCCTGCAGCAGTATACTTCTATACCATGGTAAATGCTTGAGCGTATCTA
ATAAACTATATACCTGTTTGGAACTATGCACAGTGTAGCCCGGGTAGCCATTCAGTTGTT
TCCGTGAAAGATGGAGGTTGATAGTATATGTTACTTTCTCCATAGTCTCTTTGTACTGCA
TTCTGCGTGGTTTACCAAGAGTTTATCTTGAGTTACCACTGTTTGCTAAATACGATACTA
TACTATTTTTTGGTTTGCTCAGACCAGTTGAAAACTGACTGAAAAGGTCCACTTTGGGTC
TCTGTACTGTTGCGTTGTTCCTATTTAGACAATATACTTAACAACCCGTTATTTTTAGCT
TGCACTTAGTACCATTTCTAATAAGTTTGCCACCTGTCCCGAGGGTAGAATACATAAAAA
CTGGTTATACTTCCAAACTAGCTTTACTGATGTTTAATTCATTTTATATGTGATAAAAAA
CAGCAACAACATTTAAATTGATGGAAAATTCGGTATGCTCCTGAAGATATTTAAAAGCTA
CATTAAGGATTTTTGTTGCACCACACTTATTATTTAATTTTGGAGTTTGTAGTAGGAATA
GAATAATAGGAAATCAACATGTTGTTCAAAAGTTTTGAATTTATAATGTGGGTAACATGT
GCTAACTAGAATTACTTGAGTTAAACATATGCTCAGGAGTATCCAAGGAAAGCTTACTAT
GTTTTGGCTAGTGTTTTATTAAAAGAACAAATTCTGCAATCCTCAAGAGGGCATTTTTAG
ACCTCATTTGGACTGGCTTTGTGGGAACGGTGTTAAAATAGTCAGTGCAGGTATCAAAAG
TGGGCTTTTGCCTTTAAATGTTGTAAGGGAGTATGCTCCACAGAAGCAGTTCGATGAACT
GTAATAAATTTGCGTTAAAAAAGCACTATAATAAATCCAGAGAAGCTGGATTCTTTCTGA
CTGGAAATGCAGGTACTAGAGAACGACCTTGATGCTACTGCGTTTGCCAACCGGAGCCTG
TGCTGGTTGCGGCTGAGGGAGGGGGCCAAGGCTCTGTTAGATGCTCAACAGTGCAAAATG
ATACGGCCTCGTTGGTCGAAGGCATGGTATCGCGAGGGCGCGGCTCTCAGCTTGCTGAAG
GACTACCAAGGGGCAGTCAACGCGTTCACGGAAGCATTGAAACTGGATCCTGCAAGTTTA
GAGATCAAGAAAGCCTTAAGGTAATGCTCTTGTTTCTGGCCACTGCTTATTTTCAACCAT
TTCCATAACTGGGCCTCTATATTGGACACCACCATGCTATTTTTCAGTTATTTCAATGTT
CCAGTTATTGGCCACAGCGAAGTATGACCATCCAAATTCCCAACTATTCTCATATAACTT
GTAGGGAGGCCACCGATTCCCTGGCGAACGTTGGCCGCTCCGGAGAACAGAACCCATGAG
CTGCTGCTGCATCCATGTGCTTTATCTCACGTTAAGAATCCTCTAACACTATGTGGCTCA
GCCTCATATTATATGTTGATATATGTCGCCTTAACGCACTGCTGGAGATACTAGTTTCGA
TCTCAGCCTATATGTTTTGCTCCTTCGGGATGCAGCCTAAGATACATGTGGCAACCAAGT
GAGGTTGGGCAGGGTAGCATATCTATGGACTGGTTGAACTATTATATGTATCTGGATATC
TAAGTGCACCTGTTGCTCCTAGTAAAGTTGCAGTTCTAATGACCCCTTCGTCAAATTCGA
TTGGGTGCACACTTGCAGGTTTGCCGATTCATCTAAAGCTTTAATCTGATCAGTTTCAAC
CCCTCTGGTCGGTTTCTCCATGTTCTTGTTCTGGTCTTCACTCCGCAGTTCTTCAGCATC
TGCCGATCGATATGATTGTTTCTGTGGGCTGAGCTATTTTCCATTTAATCTGGCAGGTAA
AGAATTAGTCGATGCCGCCACTCGGTTTCTGTTAATACAAAACATGCTCCACCATTCTGC
TGCTGGGATAAAAGGGCACCAACAATGCCTGCCAAAAAAACAAAACCCGAAATACCCGAA
TCTGGAATACCTCAACTTGAATTTTGTTCTAGAATTTCGGATGGTATCTTGTAAAAAAAA
ATTGGATGTATAATTCGGGTACCACAATCTTGTACCTAAAATATCCGAAGTACCTAAACT
TTCATGTGTTAATTATATCAAAGTTTGTATGAACAT