Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030954_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:168741764:168745611:1 gene:Zm00001d030954 gene_biotype:protein_coding transcript_biotype:protein_coding description:PIG-X/PBN1 family protein
Sequence

ATGGCTGCGGGGGGCGGGCGGTGCTTGCTCGCCTTGGCGCTCGCCGCCGCTTGGATCTCC
GGCGCGGTGGTCGCCGCCTCATCGTCGGGTGAGCAGGAAGGCGGAAGCCGCACACCCGTC
AAATGCATGCCCTGCTCTAGAACGTACATTGGTGGTGCACATCTGGACACCTTGACGGGC
CAGCTTGCTCAGCGTCGTGACATAGTGGAAATGTCTGATTCTGGTGAATTGTGCAAAGGA
CTTGCTGATGATGTCGAAGTTCCTATGCTTTCAAAACTACGCCGGCAACTGGTTGGTAAA
GGTTCTCACCGCCGTTTAGTCTATTCTGTGGATTTTGGTGCCCATGAAGGTGCTATGGTT
AATTTCCTTGATCACTACGATGCCCATCTGGTGATATTTGAAAAACTTCCTGATGGAGTG
TTTGCCGACCCATTTGAGCTACAGCATTTTGTTGAGCGCAAAGTTTTCGTTGATGTTGCT
GTTTTTGGAGACGCCAACCTTGAACTGCCCACAGCTCTATCCAATGGGTCATCTGTTGAG
ATCCATTTTGATCTCAGGCGAATCATTTCAATCAACTGTAACCTTGTAATAGAGATGCCT
CTCCATGCTAGATACCCGCCTCTTGATGCCAGTGGCTATGCCACAGTGGAGTTTGGTAGC
GCAGATCTATTCCTCCGCTACAGAAAAAAGGACATCCATTCTGGTTCCTGTCTTTGGGTG
ATCAATAATCTCAAAGCTGCACCCCTGGAGAAAGCTGCATGGCGCATACCCTGTGGAGAC
GAGGCCCACATAGGATTTGTATCTAGCATCACGTTTCTTTCAGCTCTTGTTTGCTCCATG
TCCATTGTCTTGGCTTCTCTCATTTTTTGA

Peptide Sequence

PEP ID

Zm00001d030954_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:168741764:168745611:1 gene:Zm00001d030954 transcript:Zm00001d030954_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:PIG-X/PBN1 family protein
Sequence

MAAGGGRCLLALALAAAWISGAVVAASSSGEQEGGSRTPVKCMPCSRTYIGGAHLDTLTG
QLAQRRDIVEMSDSGELCKGLADDVEVPMLSKLRRQLVGKGSHRRLVYSVDFGAHEGAMV
NFLDHYDAHLVIFEKLPDGVFADPFELQHFVERKVFVDVAVFGDANLELPTALSNGSSVE
IHFDLRRIISINCNLVIEMPLHARYPPLDASGYATVEFGSADLFLRYRKKDIHSGSCLWV
INNLKAAPLEKAAWRIPCGDEAHIGFVSSITFLSALVCSMSIVLASLIF

Transcript Sequence

Transcript ID

Zm00001d030954_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:168741764:168745611:1 gene:Zm00001d030954 gene_biotype:protein_coding transcript_biotype:protein_coding description:PIG-X/PBN1 family protein
Sequence

GTTGGCTCAGCCGGAAGGCCCAATTGATGAAGACGGATAAGCTCGGCTCAGGTTAGGCCC
CGGCATCGCCGTCGACTAGGCTGGCCCTCCGCCGTCTGCCATGACGAGATCCGCGTCCCC
GAGCGTGGACGCTCCACGCCTCCGCCTCCCGGACGCCGGCGAGGTGCGTCCGGCGTCCCT
GCTGCACACAACCTGACAACCTACTTCTCTCTTCTATCTACCACAAGATCCTTCCGCCGC
CTCCCCCTCCTGACAGAGCAGAGGCAGAGCTGAGGCCCGGCCTGGCCGGGCTTCGGCGGC
CCAGCCCAAATAACCCGACGGGTCCGCATCCTGAGCTCCGCCTCCACACACCTTGGCACC
TCGCCCTCGCCTCCAGCTCCGCACGTCCCGTCGCCCGCTTCCACCTCCACGCGACGCGAC
GGCTCGCCTTCACCTCCTCGCCGCCAGACGCGCCCGCCGCCACCCAGCGAGCCGGCAGCC
GCCCGCTATCCCAGGCTTCGTTTTCTTGTTGGCTCCGCCACTGTGACAGATGGCTGCGGG
GGGCGGGCGGTGCTTGCTCGCCTTGGCGCTCGCCGCCGCTTGGATCTCCGGCGCGGTGGT
CGCCGCCTCATCGTCGGGTGAGCAGGAAGGCGGAAGCCGCACACCCGTCAAATGCATGCC
CTGCTCTAGAACGTACATTGGTGGTGCACATCTGGACACCTTGACGGGCCAGCTTGCTCA
GCGTCGTGACATAGTGGAAATGTCTGATTCTGGTGAATTGTGCAAAGGACTTGCTGATGA
TGTCGAAGTTCCTATGCTTTCAAAACTACGCCGGCAACTGGTTGGTAAAGGTTCTCACCG
CCGTTTAGTCTATTCTGTGGATTTTGGTGCCCATGAAGGTGCTATGGTTAATTTCCTTGA
TCACTACGATGCCCATCTGGTGATATTTGAAAAACTTCCTGATGGAGTGTTTGCCGACCC
ATTTGAGCTACAGCATTTTGTTGAGCGCAAAGTTTTCGTTGATGTTGCTGTTTTTGGAGA
CGCCAACCTTGAACTGCCCACAGCTCTATCCAATGGGTCATCTGTTGAGATCCATTTTGA
TCTCAGGCGAATCATTTCAATCAACTGTAACCTTGTAATAGAGATGCCTCTCCATGCTAG
ATACCCGCCTCTTGATGCCAGTGGCTATGCCACAGTGGAGTTTGGTAGCGCAGATCTATT
CCTCCGCTACAGAAAAAAGGACATCCATTCTGGTTCCTGTCTTTGGGTGATCAATAATCT
CAAAGCTGCACCCCTGGAGAAAGCTGCATGGCGCATACCCTGTGGAGACGAGGCCCACAT
AGGATTTGTATCTAGCATCACGTTTCTTTCAGCTCTTGTTTGCTCCATGTCCATTGTCTT
GGCTTCTCTCATTTTTTGACGTCTTAGGGTCCTATCAGACCTTTTTTTTGTTTACATAAA
TACTGAAGTGCGAGACAGGAGAATTCTCTTCATGCATCCACACATCCTTGCAAATGACAA
CCCAGTTGCCATTAATTTTGCTAGCTTTAGTGGAGTCTTTGCAAGTTCCATTGAACGGAG
TTGCCAACTTCGAATCACATACAGACCAGAACCAGATAAGGGTGTTCCTCTTTGTGATGG
AAAAAGGAGTCCCAAAAGAAAAATCATCTACTTCAAGTTCGGTTTGTGCTCATGAGTCAT
GAGGCAGTCAGAGCCAGAAGCTGAATGCCACCATCATCTTGGAAGAAGACTTGATCCGCT
GGCTGGAAAGAAATCGAAACCTAACCAGTCTGTCGGATGCTGACAAACATTACTGCAGAG
CACCTGATGTCCTGGTTGATGCCTGACAGAAATAACAAATACTACTAAAAAGAATACAAT
TTTAGATGCACTCTTAATTGAAACGTGTAAAAGTTTGATCAGATATATAGATTTAAAAGG
CACTGATGTTTATGACGCCGAAAGTAAATATGCTATGAAAACATACCTAATGACAAATTT
GATGGTATTTATTTGATATTAGAATTTTCTGTTCTTTTTAATAATGTTATTACAGATTTA
AAGACATTAACTTGGTGT