Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d030860_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:1:164018872:164031018:1 gene:Zm00001d030860 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein HYP1
Sequence	ATGTCGATGGAGAGTTCAGCGATGGTGCGTGTGTCCTCGTCGTACATGACGAGCGTGGTG ATCGGGGAGCGGCGCGCCGACGCGAGGGAGCGCATGGAGGCGGAGTACAAATATATCTCT GGCAAGAGGCTAGAGTATTTTATGATCTCAAAGCCATTACCTCAGCACTTCACAGTTCTT GTTCGAGCTATTCCAGTATCTGATGGTGTTTCAGTGGGTGATGCTGTTGATAAGTTTTTT AAAGAGTATCATGCATCCACGTACTTATCACACACAATTGTTCGTCAAACTGGCAAACTT CGCCGTCTTCTGAACGATGCTGAGAGTATTTGTACAAAGCTTACCAACTTAAACCATGTC CGACGGTCAACTGGAGATCCTCCAAGAAAACTTGGATTATTTAGCAGAAATGATCTTGTT GGAGAATACCAGAAAAGGCTGGAAGACCTTGAAGAGAATGTTAGAATGGAACAGTCAGAT GCTACTAGGAGACAGGAAATTCCTGCTGCCTTTGTTTCATTCAGATCTCGATATAGCGCT GCAAATGCAGTTTACATTAGACAGTCAGACAACCCAACTGAGTGGCAAACTGAGGAAGCT CCTGATCCTCATGACGTTTATTGGCCTTTCTTTTCTACATCCTTCATGGAAAGATGGATT GCCAAGTTTGTAGTATTTGTAGCTTCAGTTCTCCTGATACTTGTCTTTCTCCTAGTTGTG GCATTTGTTCAAGGACTCACCTATCTGGAACAACTAGAGAAGTGGTTGCCTTTTCTGAGG AACATACTGGAAATTGCTGTTGTGAGTCAACTGGTTACAGGATATCTTCCCAGTGTTATT CTTCACGTTCTTTCATCTTGTGTGCCCTCAATAATGAAGTTATTTTCAACTATGCAAGGA TTTGTTTCTGTTAGTGGGATTGAGCAAAGTGCTTGCAATAAGATGCTTCGGTTTACAATA TGGACTGCGTTCTTTGCCAATGTTCTCACTGGTTCAGCCTTAGTTCAATTCGAGATTTTC CTTAATCCAAAGGAGCTACCTTCAAAACTTGCAGTTCTTGTACCAGCGCAGGCCTCTTTC TTTATTGCATATGTGGTCACATCGTGGACAAGCATAACATCTGAACTCACTCAAATTACT GCTCTTTTCTGTCATCTGTGGGGAAAGTGTGCGAAGTGTTGCAAGCGGGATTACTCCAAA GCTCCATCAATGCCTTATTATAGTGAAATTCCACGGATTCTCTTGTTTGGGCTTATTGGA CTCGCATATTTTATTGTAGCCCCCCTTATCCTACCATTTGTATTGGTCTACTTCTGCCTT GGCTACTTCATATTCCGTAATCAGCTTTTTAATGTATATGCGCCAAAGTATGATACTGGA GGGAAATTTTGGCCCGTTGTGCACAACACAACGATATTCTCTCTGGTTGTTCTGCATATA ATTGCTATTGGAGTATTTGGGATAAAGAAGCTTCCCCTTGCGTCCAGTTTGCTACTTCCC CTACCACCGCTGACCCTTCTGTTCAACGAATTCTGCCGGAACAGATTTCTGCCTATCTTT GAAGCATACTCTACCGAGTCATTGCTAAAGAAAGATAGAGAAGAACAGAGCAAACCAGAT ATGGCGGAGTTCTTCAGTAATCTTGTAACAGCTTACTGTGACCCAGCTCTGAAACCTTTC CAACGGGCTTCTAACTCCGACGAACGCACCGCGCCGCTCTTGGCCTCTCTGTCTAGCTCC AGATAA

Peptide Sequence

PEP ID	Zm00001d030860_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:1:164018872:164031018:1 gene:Zm00001d030860 transcript:Zm00001d030860_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein HYP1
Sequence	MSMESSAMVRVSSSYMTSVVIGERRADARERMEAEYKYISGKRLEYFMISKPLPQHFTVL VRAIPVSDGVSVGDAVDKFFKEYHASTYLSHTIVRQTGKLRRLLNDAESICTKLTNLNHV RRSTGDPPRKLGLFSRNDLVGEYQKRLEDLEENVRMEQSDATRRQEIPAAFVSFRSRYSA ANAVYIRQSDNPTEWQTEEAPDPHDVYWPFFSTSFMERWIAKFVVFVASVLLILVFLLVV AFVQGLTYLEQLEKWLPFLRNILEIAVVSQLVTGYLPSVILHVLSSCVPSIMKLFSTMQG FVSVSGIEQSACNKMLRFTIWTAFFANVLTGSALVQFEIFLNPKELPSKLAVLVPAQASF FIAYVVTSWTSITSELTQITALFCHLWGKCAKCCKRDYSKAPSMPYYSEIPRILLFGLIG LAYFIVAPLILPFVLVYFCLGYFIFRNQLFNVYAPKYDTGGKFWPVVHNTTIFSLVVLHI IAIGVFGIKKLPLASSLLLPLPPLTLLFNEFCRNRFLPIFEAYSTESLLKKDREEQSKPD MAEFFSNLVTAYCDPALKPFQRASNSDERTAPLLASLSSSR

Transcript Sequence

Transcript ID	Zm00001d030860_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:164018872:164031018:1 gene:Zm00001d030860 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein HYP1
Sequence	ATGTCGATGGAGAGTTCAGCGATGGTGCGTGTGTCCTCGTCGTACATGACGAGCGTGGTG ATCGGGGAGCGGCGCGCCGACGCGAGGGAGCGCATGGAGGCGGAGTACAAATATATCTCT GGCAAGAGGCTAGAGTATTTTATGATCTCAAAGCCATTACCTCAGCACTTCACAGTTCTT GTTCGAGCTATTCCAGTATCTGATGGTGTTTCAGTGGGTGATGCTGTTGATAAGTTTTTT AAAGAGTATCATGCATCCACGTACTTATCACACACAATTGTTCGTCAAACTGGCAAACTT CGCCGTCTTCTGAACGATGCTGAGAGTATTTGTACAAAGCTTACCAACTTAAACCATGTC CGACGGTCAACTGGAGATCCTCCAAGAAAACTTGGATTATTTAGCAGAAATGATCTTGTT GGAGAATACCAGAAAAGGCTGGAAGACCTTGAAGAGAATGTTAGAATGGAACAGTCAGAT GCTACTAGGAGACAGGAAATTCCTGCTGCCTTTGTTTCATTCAGATCTCGATATAGCGCT GCAAATGCAGTTTACATTAGACAGTCAGACAACCCAACTGAGTGGCAAACTGAGGAAGCT CCTGATCCTCATGACGTTTATTGGCCTTTCTTTTCTACATCCTTCATGGAAAGATGGATT GCCAAGTTTGTAGTATTTGTAGCTTCAGTTCTCCTGATACTTGTCTTTCTCCTAGTTGTG GCATTTGTTCAAGGACTCACCTATCTGGAACAACTAGAGAAGTGGTTGCCTTTTCTGAGG AACATACTGGAAATTGCTGTTGTGAGTCAACTGGTTACAGGATATCTTCCCAGTGTTATT CTTCACGTTCTTTCATCTTGTGTGCCCTCAATAATGAAGTTATTTTCAACTATGCAAGGA TTTGTTTCTGTTAGTGGGATTGAGCAAAGTGCTTGCAATAAGATGCTTCGGTTTACAATA TGGACTGCGTTCTTTGCCAATGTTCTCACTGGTTCAGCCTTAGTTCAATTCGAGATTTTC CTTAATCCAAAGGAGCTACCTTCAAAACTTGCAGTTCTTGTACCAGCGCAGGCCTCTTTC TTTATTGCATATGTGGTCACATCGTGGACAAGCATAACATCTGAACTCACTCAAATTACT GCTCTTTTCTGTCATCTGTGGGGAAAGTGTGCGAAGTGTTGCAAGCGGGATTACTCCAAA GCTCCATCAATGCCTTATTATAGTGAAATTCCACGGATTCTCTTGTTTGGGCTTATTGGA CTCGCATATTTTATTGTAGCCCCCCTTATCCTACCATTTGTATTGGTCTACTTCTGCCTT GGCTACTTCATATTCCGTAATCAGCTTTTTAATGTATATGCGCCAAAGTATGATACTGGA GGGAAATTTTGGCCCGTTGTGCACAACACAACGATATTCTCTCTGGTTGTTCTGCATATA ATTGCTATTGGAGTATTTGGGATAAAGAAGCTTCCCCTTGCGTCCAGTTTGCTACTTCCC CTACCACCGCTGACCCTTCTGTTCAACGAATTCTGCCGGAACAGATTTCTGCCTATCTTT GAAGCATACTCTACCGAGTCATTGCTAAAGAAAGATAGAGAAGAACAGAGCAAACCAGAT ATGGCGGAGTTCTTCAGTAATCTTGTAACAGCTTACTGTGACCCAGCTCTGAAACCTTTC CAACGGGCTTCTAACTCCGACGAACGCACCGCGCCGCTCTTGGCCTCTCTGTCTAGCTCC AGATAAGCTGTGGATGGCAGCTGACTCCGCTGTGTGAATTTCGATTTGATTTTGGTGTTT AGATACGGCTAGTAGCATAGGTATAATTTTATGCTACATTGTAAGAGTAGAACTTTTGAC AGACATATAGTTTCTTATTGTTGTTGTCTGTTGTGCAATTTTTTGCCCTTCTGGTGTGGG GGGGAGTTCGTTGTACATATGTGAATGTACATGATATTTTGTGCACTTCTCAGAGATGAA TTGCTCGTTTTATGATGTGTTGGCAACGCAAACTTATGCATCGTTCGTTCATGGGTTGTA CGGTAAACTGCTTGTACCTTCAGAATTTTCATCAACTTCATTTTTAAT