Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030790_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:159877883:159884491:1 gene:Zm00001d030790 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable galacturonosyltransferase 13
Sequence

ATGCAGATCCGGCTGTCGCCGAGCATGAGGAGCATCACCATCTCCACTAGCCATGGCCTG
CTAGACTTGATGAGGTTCAAGGTCGCCGCGCGACACTTCTCCTACCGCACCGTCTTCCAC
ACCGTCCTAATCCTCGCCTTCCTCCTGCCTTTCGTCTTCATACTCACCGCCGTCATGACT
CTCGAGGGCTTCAACAAGTGCTCTTCACTAGATTGTCTTGGAAGACGTTTGGGTCCGCGC
CTTCTTGGTAGGGGAAATGATGGTTCCATGAGGCTTGTGAGGGATTTATATGTGATGCTT
GATGAAGTAAATTCTGAGGAAGCACCTCTTAATTTGAAGGTTCCAGAAACTTTTGATGAA
TTTATCTGGGACATGAAGAATAATGATTATGATTTAAGGTCATTTGCTTTTAAGTTGAAG
GCTACGATGGAGAGCATGGATAAGGAATTGAGGTCATCAAGGTTATCGGAGCAGTTGAAC
AAGCACTATGCTGCAATTGCTATTCCTAAAGGCCTTTATTGCCTTTCATTGCGTTTAACT
GATGAATACTCCTCAAATGCCCTTGCAAGGAAACAACTACCACCCCCGGAGTTGGTGCCT
AGTCTTTCGGACAACTCCTATTACCATTTTGTTTTAGCATCAGATAACATCCTTGCAGCC
TCAGTTGTGGTCAGATCAACAGTTAGATCATCACTGAAACCTGAGAGAATAGTTTTCCAT
GTTATTACTGACAAAAAGACCTATCCTGCCATGCACTCATGGTTTGCTTTAAATTCTCTC
AGTCCTGCTATTGTTGAGGTGAAAGGTGTTCACCAATTTGATTGGTTAACAAAAGAAAAT
GTTCCTGTACTTGAAGCTATAGAAACTCAGCGCACTGCTAGAGATCGTTACCATGGAAGT
CACCGTCCAAGAACCAGTGCTAGTGATAACCCAAGGGTTTTTGCGGCCAAGCTGCAGGCA
GGAAGTCCAACATACACTAATGTACTCAATCATATTCGAATATACTTGCCTGAGTTGTTC
CCAAGCCTCAACAAGGTCGTATTTCTTGATGATGATGTTGTTGTCCAGCATGACCTATCA
CCACTTTGGGATATCGATCTAGCTGGGAAGGTTAATGGTGCTGTTGAGACTTGCATAGGT
GGAGACAGTCGGGTGATGTCTAAGAGGTTCAGGAATTATTTCAACTTTTCTCATCCCCTC
ATTGCAAAAAACTTTGACCCTTCAGAGTGTGCTTGGGCATATGGTATGAATATTTTTGAC
CTGAAAGCATGGAGGAAGACAACAATCAAAGATCAGTATCATCATTGGGTCAAGGAGAAC
TTGAAGTCAAACTTCACACTTTGGAGGCTTGGAACATTGCCACCAGGCCTTATTGCCTTT
AAAGGCCATGTTCACCCAATTGATCCATCATGGCATCTGTTAGGCTTGGGTTATCAGGAA
AAGACAGATGTCAGTAGCGTTGAACAAGCAGCAGTTATACATTATAACGGGCAAAGTAAA
CCGTGGCTGGAGATTGGTTTTAAACATCTTCAGCCATTTTGGACAAAATATGTGAACTAC
TCAAATGAATTCATAAGAAACTGTCATATAATGGAGCCTCAGTTTAGATTGTCTTGA

Peptide Sequence

PEP ID

Zm00001d030790_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:159877883:159884491:1 gene:Zm00001d030790 transcript:Zm00001d030790_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable galacturonosyltransferase 13
Sequence

MQIRLSPSMRSITISTSHGLLDLMRFKVAARHFSYRTVFHTVLILAFLLPFVFILTAVMT
LEGFNKCSSLDCLGRRLGPRLLGRGNDGSMRLVRDLYVMLDEVNSEEAPLNLKVPETFDE
FIWDMKNNDYDLRSFAFKLKATMESMDKELRSSRLSEQLNKHYAAIAIPKGLYCLSLRLT
DEYSSNALARKQLPPPELVPSLSDNSYYHFVLASDNILAASVVVRSTVRSSLKPERIVFH
VITDKKTYPAMHSWFALNSLSPAIVEVKGVHQFDWLTKENVPVLEAIETQRTARDRYHGS
HRPRTSASDNPRVFAAKLQAGSPTYTNVLNHIRIYLPELFPSLNKVVFLDDDVVVQHDLS
PLWDIDLAGKVNGAVETCIGGDSRVMSKRFRNYFNFSHPLIAKNFDPSECAWAYGMNIFD
LKAWRKTTIKDQYHHWVKENLKSNFTLWRLGTLPPGLIAFKGHVHPIDPSWHLLGLGYQE
KTDVSSVEQAAVIHYNGQSKPWLEIGFKHLQPFWTKYVNYSNEFIRNCHIMEPQFRLS

Transcript Sequence

Transcript ID

Zm00001d030790_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:159877883:159884491:1 gene:Zm00001d030790 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable galacturonosyltransferase 13
Sequence

ATCGTGCTGCGGTGTCCGAGTGATTCATCGTCTTCCCGGAACCAACAGGCCGCTGTTTGA
CTTTGACCCAACCACACCACGCGGGACGGGGCTCCGCCTCCGACCCCGCGCCGACCTAAC
GTGACCAACTCACTCAACCTCGCTGCCGTGACGTGCCGTACCGTGCCGCCCTGTCCATCG
GGTCAAATCCCTCGTCGCTTCCTCTCCGCCTCCTCGCCACTTCTCCGCTAATCCCCAATC
CGGAACCTCACCGCGGAGAACCCCAGATCAAACCCTTCCCCGCCCATTCCCACTTCCATC
CTTCCAGTACGATCCGTTTCTTCCTTACTTCCCTGCTCATCCGAGGGTGAGGAAGGAGTC
GGGCGAGGAATCCACCGCCGGGGTTTCTTGATCCGGGCGCGTGATTCGCCGCGCCCAGGC
ACCAGTGAGAAATCAAATCAAGAACGGGGTGGGGGAAGTGAGACGAGGGCGCGGGGAGCA
ATCAAGATCGCTTCTTGGAGCTTTCGGCCCCCCCGAGCCAATGCCGGATCCGGTTAGCGG
CGCCCCCCGCTCCCACGGCGCCGGGCTGGCATGCCCCCTCTGAGCGCCCCCGCCTGCCTC
CGCGGCTCCCGATGCTCGTGTGGTCTTCGGGAGCAGGAGAGGGAGCAGCGGCCGTCGTGG
GCGGCGGCCAGGAGCGAGGATGCAGATCCGGCTGTCGCCGAGCATGAGGAGCATCACCAT
CTCCACTAGCCATGGCCTGCTAGACTTGATGAGGTTCAAGGTCGCCGCGCGACACTTCTC
CTACCGCACCGTCTTCCACACCGTCCTAATCCTCGCCTTCCTCCTGCCTTTCGTCTTCAT
ACTCACCGCCGTCATGACTCTCGAGGGCTTCAACAAGTGCTCTTCACTAGATTGTCTTGG
AAGACGTTTGGGTCCGCGCCTTCTTGGTAGGGGAAATGATGGTTCCATGAGGCTTGTGAG
GGATTTATATGTGATGCTTGATGAAGTAAATTCTGAGGAAGCACCTCTTAATTTGAAGGT
TCCAGAAACTTTTGATGAATTTATCTGGGACATGAAGAATAATGATTATGATTTAAGGTC
ATTTGCTTTTAAGTTGAAGGCTACGATGGAGAGCATGGATAAGGAATTGAGGTCATCAAG
GTTATCGGAGCAGTTGAACAAGCACTATGCTGCAATTGCTATTCCTAAAGGCCTTTATTG
CCTTTCATTGCGTTTAACTGATGAATACTCCTCAAATGCCCTTGCAAGGAAACAACTACC
ACCCCCGGAGTTGGTGCCTAGTCTTTCGGACAACTCCTATTACCATTTTGTTTTAGCATC
AGATAACATCCTTGCAGCCTCAGTTGTGGTCAGATCAACAGTTAGATCATCACTGAAACC
TGAGAGAATAGTTTTCCATGTTATTACTGACAAAAAGACCTATCCTGCCATGCACTCATG
GTTTGCTTTAAATTCTCTCAGTCCTGCTATTGTTGAGGTGAAAGGTGTTCACCAATTTGA
TTGGTTAACAAAAGAAAATGTTCCTGTACTTGAAGCTATAGAAACTCAGCGCACTGCTAG
AGATCGTTACCATGGAAGTCACCGTCCAAGAACCAGTGCTAGTGATAACCCAAGGGTTTT
TGCGGCCAAGCTGCAGGCAGGAAGTCCAACATACACTAATGTACTCAATCATATTCGAAT
ATACTTGCCTGAGTTGTTCCCAAGCCTCAACAAGGTCGTATTTCTTGATGATGATGTTGT
TGTCCAGCATGACCTATCACCACTTTGGGATATCGATCTAGCTGGGAAGGTTAATGGTGC
TGTTGAGACTTGCATAGGTGGAGACAGTCGGGTGATGTCTAAGAGGTTCAGGAATTATTT
CAACTTTTCTCATCCCCTCATTGCAAAAAACTTTGACCCTTCAGAGTGTGCTTGGGCATA
TGGTATGAATATTTTTGACCTGAAAGCATGGAGGAAGACAACAATCAAAGATCAGTATCA
TCATTGGGTCAAGGAGAACTTGAAGTCAAACTTCACACTTTGGAGGCTTGGAACATTGCC
ACCAGGCCTTATTGCCTTTAAAGGCCATGTTCACCCAATTGATCCATCATGGCATCTGTT
AGGCTTGGGTTATCAGGAAAAGACAGATGTCAGTAGCGTTGAACAAGCAGCAGTTATACA
TTATAACGGGCAAAGTAAACCGTGGCTGGAGATTGGTTTTAAACATCTTCAGCCATTTTG
GACAAAATATGTGAACTACTCAAATGAATTCATAAGAAACTGTCATATAATGGAGCCTCA
GTTTAGATTGTCTTGACAATATATATAAAAGCATATAGTAAGTGAAATTAAATTCGTTAT
TTTGGAAATCAACAGCAGGGAGTTTATCAAGTGCAACTGGGGAGCTCAGTAATCCCTTAA
CATGGTTACATGCGCTGTGGAGAATATTCAATGAACAGAAAGGAAATGTTATTTTTTCCC
CATTTACTGTAGGGCCCTTTTCCTTTAATTTATTCCATTTGTATCATAGCTCATGAAATT
AAGATATTGCTTAGGATGGTTCTTTTGTATTTTATGGAGCAATATAAGTTGGGTTGATGG
TAGTCCCATCGTTATTGTAATTGATGAAGAGCATACACATTTCACCATGTGAAAAGCATG
GATTTTGATTATGCAAAGCAAACCTTGTATACTTTTTACATTGTATGTGTGATTTCATTT
G