Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030694_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:1:153744362:153747806:1 gene:Zm00001d030694 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thaumatin-like protein

Sequence

ATGTCGCTCGATGTTACTCAAGTACTCTTAAGCGCGCAATCTGCTGATGGCGCAGTAAGG
AAGCATGCTGAAGAAAGCCTCAAGCAGTTCCAGGAGCAGAACCTCCCTGGATTCTTGCTC
TCTCTCTCAAGTGAGTTGGCCAATGAAGAGAAACCTGAGGAGAGCCGCAGGTTAGCTGGC
TTGATTCTTAAGAATGCACTGGATGCAAAGGAGCAGCACAGGAAGAATGAGCTTTTCCAG
AGATGGCTGGCACTGGATGCTGGTGCCAAAGCACAAATTAAAGGATTGCTGCTGCAAACT
CTCACATCTCCTGTTGCAAGTGCCAGATCCACTGCTTCCCAAGTTATTGCCAAGGTTGCC
GGTATTGAGATTCCGCAGAAGCAATGGCCAGAACTTATAGGATCATTGCTTGCAAACATA
CATCAGGTCCAGCCAAATGTCAAGCAAGCGACGCTTGAGACACTTGGCTATTTATGTGAG
GAAGTTTCTCCAGATGCTGTTGACCAAGACCAAGTCAATAAAATACTTACAGCTGTTGTT
CAGGGTATGAATGCTTCTGAGGCAAACTCTGATGTCAGGCTTGCAGCTACACGGGCATTG
TATAATGCTTTGGGCTTTGCTCAGGTTAATTTCTCGAATGACATGGAGCGTGACTATATC
ATGAGAGTAGTTTGTGAAGCGACACAGTCTCCAGATGTGAAGATAAGGCAGGCTGCTTTT
GAGTGTTTGGTGGCTATCTCGTCTACTTATTATGATAAGCTGGCAACATACATGCGGGAT
ATATTTAATATAACTGCAAAAGCTGTGAGGGGAGATGAGGAGTCAGTTGCGCTCCAGGCT
ATTGAATTCTGGAGTTCCATATGTGATGAGGAAATCGACATTCTGGATGAGTACAGCAGT
GAATTTACAGCTGATTCTGATGTTCCTTGCTACTACTTTATCAAGCAGGCTCTTCCTGCC
TTAGTGCCGATGTTGTTAGAAACTCTCCTCAAGCAAGAGGAAGACCAAGACTTGGATGAA
GGTGCTTGGAATCTTGCAATGGCTGGGGGAACTTGTCTGGGCCTGGTGGCAAGGACCGTT
GGTGATGACATTGTTCCTCTCGTAATGCCTTTTGTGGAGGAGAACATAACCAAGTCTGAG
TGGAGACAAAGAGAGGCTGCAACATATGCCTTTGGCTCTATCTTGGAGGGCCCATCAGCT
GATAAACTGGCTCCTCTTGTTAATGTTGCATTGGGCTTCATGCTGTCCGCGCTGATGAAG
GATCCAAGTAACCATGTGAAGGACACAACTGCTTGGACCCTTGGGAGAATCTTTGAGTTT
CTTCATGGTTCAGCGCTTGAAACTCCTCCTATCATTACGGCCGAGAATTGTCAGCAAATA
CTTACTGTGTTGCTTCACAGCATGAAGGATGTCCCAAATGTGGCTGAAAAGGCCTGTGGA
GCCCTCTATTTTCTTGCACAAGGCTATGTTGATTCTGGGTCTGCATCGCCACTATCCCCT
TTCTTTCAAGATATTGTTCAGAACCTTCTTATGGTCACTCACAGGGAGGATGCTGGGGAA
TCTCGGCTACGAACAGCAGCATATGAGACCCTAAATGAAGTTGTCAGGTGCTCCACTGAG
GAGACGGCTGCTATTGTTATGCAGTTAGTACCTGTGATCATGGTGGAACTCCATCAGACA
CTTGAAGCTGAAAAGTTGTCAACTGATGAGAGGGAGAAGAGGAGCGAACTGCAGGGCCTC
CTTTGTGGTTGCTTGCAGGTCATTATTCAAAAGTTGGGAGGGATGGAGTCAACTAAGTAC
TCTTTCTTGCAGTATGCTGATCAGATGATGGAACTGTTTTTGAGAGTTTTCGCATGTCGA
AATGCCACAGTGCATGAGGAGGCTATGCTTGCTATTGGTGCATTGGCATATGCAGCTGGT
CCAAACTTTGCAAAATACATGGCACAGTTTTATCAGTATTTGGAGATGGGTCTTCAGAAC
TTTGAGGAGTATCAGGTGTGTGCCATTACCGTGGGCGTTGTTGGTGACCTCTGTAGAGCA
CTGGAAGACAAAATTTTGCCCTTCTGTGATGGCATCATGACTCAACTCCTGAAGGACCTG
TCCAGTAACCAGTTGCACAGATCAGTGAAACCACCAATATTTTCGTGCTTTGGTGATATT
GCACTGGCAATTGGGGAAAACTTTGAGAAGTATTTGATCTATGCGATGCCTATGCTCCAA
AGTGCTGCTGATTTGTCTGCCCATACCACTGCAACTGATGATGAGATGCTCGACTACACC
AATCAGCTAAGGAGTGGAATCTTGGAAGCCTACTCTGGTATCCTGCAAGGATTTAAGAGT
TCACCTAAGACACAACTACTGATGTCATATGCTCCACATATTATTCAGTTCCTTGATGCT
CTGTACAATGGAAAGGATATGGATGATGCTGTGATGAAGACTGCAATAGGTGTCTTGGGA
GATCTGGCAGACACATTGGGTGTCCATGCTGGCCCTTTGATCAATCAATCCACCTCAACC
CAGGCATTTTTAGAGGAATGCTTGGCATCAGATGATCCTTTGGTGAAAGAATCTGCCGAT
TGGGCGAGGATAGCAATCAGCCGTGCAGTTTCGGGTTGA

Peptide Sequence

PEP ID

Zm00001d030694_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:1:153744362:153747806:1 gene:Zm00001d030694 transcript:Zm00001d030694_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thaumatin-like protein

Sequence

MSLDVTQVLLSAQSADGAVRKHAEESLKQFQEQNLPGFLLSLSSELANEEKPEESRRLAG
LILKNALDAKEQHRKNELFQRWLALDAGAKAQIKGLLLQTLTSPVASARSTASQVIAKVA
GIEIPQKQWPELIGSLLANIHQVQPNVKQATLETLGYLCEEVSPDAVDQDQVNKILTAVV
QGMNASEANSDVRLAATRALYNALGFAQVNFSNDMERDYIMRVVCEATQSPDVKIRQAAF
ECLVAISSTYYDKLATYMRDIFNITAKAVRGDEESVALQAIEFWSSICDEEIDILDEYSS
EFTADSDVPCYYFIKQALPALVPMLLETLLKQEEDQDLDEGAWNLAMAGGTCLGLVARTV
GDDIVPLVMPFVEENITKSEWRQREAATYAFGSILEGPSADKLAPLVNVALGFMLSALMK
DPSNHVKDTTAWTLGRIFEFLHGSALETPPIITAENCQQILTVLLHSMKDVPNVAEKACG
ALYFLAQGYVDSGSASPLSPFFQDIVQNLLMVTHREDAGESRLRTAAYETLNEVVRCSTE
ETAAIVMQLVPVIMVELHQTLEAEKLSTDEREKRSELQGLLCGCLQVIIQKLGGMESTKY
SFLQYADQMMELFLRVFACRNATVHEEAMLAIGALAYAAGPNFAKYMAQFYQYLEMGLQN
FEEYQVCAITVGVVGDLCRALEDKILPFCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDI
ALAIGENFEKYLIYAMPMLQSAADLSAHTTATDDEMLDYTNQLRSGILEAYSGILQGFKS
SPKTQLLMSYAPHIIQFLDALYNGKDMDDAVMKTAIGVLGDLADTLGVHAGPLINQSTST
QAFLEECLASDDPLVKESADWARIAISRAVSG

Transcript Sequence

Transcript ID

Zm00001d030694_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:153744362:153747806:1 gene:Zm00001d030694 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thaumatin-like protein

Sequence

AGAGTCAATATGTCGCTCGATGTTACTCAAGTACTCTTAAGCGCGCAATCTGCTGATGGC
GCAGTAAGGAAGCATGCTGAAGAAAGCCTCAAGCAGTTCCAGGAGCAGAACCTCCCTGGA
TTCTTGCTCTCTCTCTCAAGTGAGTTGGCCAATGAAGAGAAACCTGAGGAGAGCCGCAGG
TTAGCTGGCTTGATTCTTAAGAATGCACTGGATGCAAAGGAGCAGCACAGGAAGAATGAG
CTTTTCCAGAGATGGCTGGCACTGGATGCTGGTGCCAAAGCACAAATTAAAGGATTGCTG
CTGCAAACTCTCACATCTCCTGTTGCAAGTGCCAGATCCACTGCTTCCCAAGTTATTGCC
AAGGTTGCCGGTATTGAGATTCCGCAGAAGCAATGGCCAGAACTTATAGGATCATTGCTT
GCAAACATACATCAGGTCCAGCCAAATGTCAAGCAAGCGACGCTTGAGACACTTGGCTAT
TTATGTGAGGAAGTTTCTCCAGATGCTGTTGACCAAGACCAAGTCAATAAAATACTTACA
GCTGTTGTTCAGGGTATGAATGCTTCTGAGGCAAACTCTGATGTCAGGCTTGCAGCTACA
CGGGCATTGTATAATGCTTTGGGCTTTGCTCAGGTTAATTTCTCGAATGACATGGAGCGT
GACTATATCATGAGAGTAGTTTGTGAAGCGACACAGTCTCCAGATGTGAAGATAAGGCAG
GCTGCTTTTGAGTGTTTGGTGGCTATCTCGTCTACTTATTATGATAAGCTGGCAACATAC
ATGCGGGATATATTTAATATAACTGCAAAAGCTGTGAGGGGAGATGAGGAGTCAGTTGCG
CTCCAGGCTATTGAATTCTGGAGTTCCATATGTGATGAGGAAATCGACATTCTGGATGAG
TACAGCAGTGAATTTACAGCTGATTCTGATGTTCCTTGCTACTACTTTATCAAGCAGGCT
CTTCCTGCCTTAGTGCCGATGTTGTTAGAAACTCTCCTCAAGCAAGAGGAAGACCAAGAC
TTGGATGAAGGTGCTTGGAATCTTGCAATGGCTGGGGGAACTTGTCTGGGCCTGGTGGCA
AGGACCGTTGGTGATGACATTGTTCCTCTCGTAATGCCTTTTGTGGAGGAGAACATAACC
AAGTCTGAGTGGAGACAAAGAGAGGCTGCAACATATGCCTTTGGCTCTATCTTGGAGGGC
CCATCAGCTGATAAACTGGCTCCTCTTGTTAATGTTGCATTGGGCTTCATGCTGTCCGCG
CTGATGAAGGATCCAAGTAACCATGTGAAGGACACAACTGCTTGGACCCTTGGGAGAATC
TTTGAGTTTCTTCATGGTTCAGCGCTTGAAACTCCTCCTATCATTACGGCCGAGAATTGT
CAGCAAATACTTACTGTGTTGCTTCACAGCATGAAGGATGTCCCAAATGTGGCTGAAAAG
GCCTGTGGAGCCCTCTATTTTCTTGCACAAGGCTATGTTGATTCTGGGTCTGCATCGCCA
CTATCCCCTTTCTTTCAAGATATTGTTCAGAACCTTCTTATGGTCACTCACAGGGAGGAT
GCTGGGGAATCTCGGCTACGAACAGCAGCATATGAGACCCTAAATGAAGTTGTCAGGTGC
TCCACTGAGGAGACGGCTGCTATTGTTATGCAGTTAGTACCTGTGATCATGGTGGAACTC
CATCAGACACTTGAAGCTGAAAAGTTGTCAACTGATGAGAGGGAGAAGAGGAGCGAACTG
CAGGGCCTCCTTTGTGGTTGCTTGCAGGTCATTATTCAAAAGTTGGGAGGGATGGAGTCA
ACTAAGTACTCTTTCTTGCAGTATGCTGATCAGATGATGGAACTGTTTTTGAGAGTTTTC
GCATGTCGAAATGCCACAGTGCATGAGGAGGCTATGCTTGCTATTGGTGCATTGGCATAT
GCAGCTGGTCCAAACTTTGCAAAATACATGGCACAGTTTTATCAGTATTTGGAGATGGGT
CTTCAGAACTTTGAGGAGTATCAGGTGTGTGCCATTACCGTGGGCGTTGTTGGTGACCTC
TGTAGAGCACTGGAAGACAAAATTTTGCCCTTCTGTGATGGCATCATGACTCAACTCCTG
AAGGACCTGTCCAGTAACCAGTTGCACAGATCAGTGAAACCACCAATATTTTCGTGCTTT
GGTGATATTGCACTGGCAATTGGGGAAAACTTTGAGAAGTATTTGATCTATGCGATGCCT
ATGCTCCAAAGTGCTGCTGATTTGTCTGCCCATACCACTGCAACTGATGATGAGATGCTC
GACTACACCAATCAGCTAAGGAGTGGAATCTTGGAAGCCTACTCTGGTATCCTGCAAGGA
TTTAAGAGTTCACCTAAGACACAACTACTGATGTCATATGCTCCACATATTATTCAGTTC
CTTGATGCTCTGTACAATGGAAAGGATATGGATGATGCTGTGATGAAGACTGCAATAGGT
GTCTTGGGAGATCTGGCAGACACATTGGGTGTCCATGCTGGCCCTTTGATCAATCAATCC
ACCTCAACCCAGGCATTTTTAGAGGAATGCTTGGCATCAGATGATCCTTTGGTGAAAGAA
TCTGCCGATTGGGCGAGGATAGCAATCAGCCGTGCAGTTTCGGGTTGATGCCAGAACATG
CTCTTGGGAGAAATCCAACATTTTTACAGCAGAGTCTGAGGGTCCTCACTAACTCATGCA
TCACTACATGTGTCAACCCGCCCTTCTTGCTTCTGCGAGAAAAGAGGGTTCAAGCTGGCC
GTCTGCTAACTTTTTCTAAAGGCATCTGCAACCTTCATTTCTTATTGGAGGTGAGATGTG
AGCTTCTATTGTCGCATGACATGCTGACCAGTTTCCTTGGCATGTCAAGCGTATGATCTG
TGGCCTATCATTTCCCCTTGCATTCATCTCATGCATTGAACATTGGTCGGATGGTCACTT
GGGACAACAGGTCCAGTTGCTTGCTGCTGCTCCAGTAAGCAAGAGCGGGCTCAAACGCAT
TGTCACAGGATTATTTTTGTATCGATCAGGGTGGCCAAGTCCATGCTGATAGTAGGATGT
TAATTTCCTAGCATTCTTTTCCTTTCATCCACTTGCATTGTCTTTGCATTTCATTCTTGG
TCGGATTGTTTTGTAAGAGTTATTTTAGGGCAAAACTTTGTCCTGTCTGGTCTGCTACCG
CACGCTATTTGTAAGTCAAGTTCATGCGTGCATTGGTTTATTTACGGGTGCTATTGGAGC
AGCGGGTGTTTGTGCTTTTTTCCATCTTGTTTTT