Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030579_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:145820512:145824791:1 gene:Zm00001d030579 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

ATGGCCGGCAAGATGAAGGAGTTAGACGGCGCCAGCCCTGCCAAGATCTTCATTGGCGGG
CTCTCCAAGGATACAAGCATGAGTACATTCAAAGAACATTTTGGGAAGTATGGGGATATA
ATTGATGCTGTCATAATGAAGGACCGCTACACACAAAAGCCCAGAGGCTTTGGCTTTATT
ACTTTTGCTGATCCCACTGTTGTTGACAGAGTGATTGAGGATGAACATGTTATCAATGGA
AAACCGGTTGAAATTAAGAGAACGATCCCTAAGGGAGCTGCTCCTTTGAAAGATTTCAAG
ACGAAGAAGATTTTTGTTGGTGGATTACCCTCAGCTCTAAAAGAAGATGAATTCAAGGAA
TTCTTTTCCAAGTTTGGGAAGGTTGTGGAGCATGAAATCATCCGTGACCATGCAACCAAC
CGGTCACGTGGATTTGGTTTTATAGTCTTTGATGCAGAAAAAGCAGTAGATGATTTATTA
CATAAGAAGGGCAATATGATTGATCTAAATGGTTCTCAGGTGGAGATCAAGAAGGCAGAA
CCAAAGAAACCCTCTAACCAACCACCTCGTTCACTTGATAGTGAGCCTAGGGGCCGTCCA
TATGCAGACAGTTATGATGGATTTGGCAGCTCTTACAATTATGGTGGTAGTTTTGGTCCC
TATAGATCACCTCGAAGTTTTGGCGCTAGGCCTAGCAGCTACAGTAGTGCTTATGGTCCT
GGTGATTATGGTAGTGGCTATGCTACTTATGGTGGAGCATTAGTAGGATACCGTGAACCT
TCCCTTTATTCTAGTCGCTATGGTAGCACTTATGGAGGCAGCCTTGGTGGTGGGTATGGT
GGTGTTAGTTATGATGGTGGATTAGCTGGTGCATATGAGCGTGATGCTGGGGGCTATGGT
GGTTCTAGCTATGGTCGTAGTTATGACTCTTCCTGGGCTAATACTGGTGATGGGTTTGGC
ACCGGTGGACTCTATGGTGCTAGGACAGGCTATGGTGGCAGTGGCGGCAGTGGTGCTGCT
GGTCGTTACCATCCATATGGAAGATAG

Peptide Sequence

PEP ID

Zm00001d030579_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:145820512:145824791:1 gene:Zm00001d030579 transcript:Zm00001d030579_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

MAGKMKELDGASPAKIFIGGLSKDTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFI
TFADPTVVDRVIEDEHVINGKPVEIKRTIPKGAAPLKDFKTKKIFVGGLPSALKEDEFKE
FFSKFGKVVEHEIIRDHATNRSRGFGFIVFDAEKAVDDLLHKKGNMIDLNGSQVEIKKAE
PKKPSNQPPRSLDSEPRGRPYADSYDGFGSSYNYGGSFGPYRSPRSFGARPSSYSSAYGP
GDYGSGYATYGGALVGYREPSLYSSRYGSTYGGSLGGGYGGVSYDGGLAGAYERDAGGYG
GSSYGRSYDSSWANTGDGFGTGGLYGARTGYGGSGGSGAAGRYHPYGR

Transcript Sequence

Transcript ID

Zm00001d030579_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:145820512:145824791:1 gene:Zm00001d030579 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

GCACGGCGGTAGAGGAACATGTGGATATCACACGCACGCGCCTACGCTTATTAGCCCTCA
TTCGAAGTCGACGGCACCCGTCTTCTCTCCGCACTCGAAACCCCATCCTTGACTAGCTCC
GATCTGGTACGAGATGGCCGGCAAGATGAAGGAGTTAGACGGCGCCAGCCCTGCCAAGAT
CTTCATTGGCGGGCTCTCCAAGGATACAAGCATGAGTACATTCAAAGAACATTTTGGGAA
GTATGGGGATATAATTGATGCTGTCATAATGAAGGACCGCTACACACAAAAGCCCAGAGG
CTTTGGCTTTATTACTTTTGCTGATCCCACTGTTGTTGACAGAGTGATTGAGGATGAACA
TGTTATCAATGGAAAACCGGTTGAAATTAAGAGAACGATCCCTAAGGGAGCTGCTCCTTT
GAAAGATTTCAAGACGAAGAAGATTTTTGTTGGTGGATTACCCTCAGCTCTAAAAGAAGA
TGAATTCAAGGAATTCTTTTCCAAGTTTGGGAAGGTTGTGGAGCATGAAATCATCCGTGA
CCATGCAACCAACCGGTCACGTGGATTTGGTTTTATAGTCTTTGATGCAGAAAAAGCAGT
AGATGATTTATTACATAAGAAGGGCAATATGATTGATCTAAATGGTTCTCAGGTGGAGAT
CAAGAAGGCAGAACCAAAGAAACCCTCTAACCAACCACCTCGTTCACTTGATAGTGAGCC
TAGGGGCCGTCCATATGCAGACAGTTATGATGGATTTGGCAGCTCTTACAATTATGGTGG
TAGTTTTGGTCCCTATAGATCACCTCGAAGTTTTGGCGCTAGGCCTAGCAGCTACAGTAG
TGCTTATGGTCCTGGTGATTATGGTAGTGGCTATGCTACTTATGGTGGAGCATTAGTAGG
ATACCGTGAACCTTCCCTTTATTCTAGTCGCTATGGTAGCACTTATGGAGGCAGCCTTGG
TGGTGGGTATGGTGGTGTTAGTTATGATGGTGGATTAGCTGGTGCATATGAGCGTGATGC
TGGGGGCTATGGTGGTTCTAGCTATGGTCGTAGTTATGACTCTTCCTGGGCTAATACTGG
TGATGGGTTTGGCACCGGTGGACTCTATGGTGCTAGGACAGGCTATGGTGGCAGTGGCGG
CAGTGGTGCTGCTGGTCGTTACCATCCATATGGAAGATAGAAAATCTCCAGTGCTGCTGT
TTGCTAGAGAAGCTTGCAGAAGATGAATTCTAGATGTGTGCTCAAGAGATCATCTGCATC
TAAAAGATGCACTGAAGTTCAATATGCTCAGTTTTCTGTATTAGGAAGTACTGTTAGATC
AACTTGTAGAAATTTAAACCTTTGTTTTGGTATTTGGAATTGGAATTTAAGCATATTTGA
TAAGCGTATGCACTTTTATAGATAGAAAATCTAGTGACCCGTCAAAACTAGCTGCTAGTA
CAAGCATGAGTTATTCTTTGTTAGTATAGTTTGCTTTGTCTTTACGAATATTATGGAGTG
GTCAAAGTTAACCTAAGGGCCGAACGCAGTTTCTTTACATGTAGTTACAGAAGTGTTATC
TTGTTTCTTTATCTTGTTCCGCGTAGGTTTTGTTTGGAGTTCGATGGATTAAGTTGTACT
TAGAACTAGATTGGTCTTTTTATAGTGGTTCGCATGCTTTCACCGT