Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030508_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:140235550:140243657:1 gene:Zm00001d030508 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein S-acyltransferase 22
Sequence

ATGAGGAGGCACGGGTGGCAGCTACCCTACCATCCTCTCCAGGTGGTGGCGATAGCGGTC
TTCCTGGCGCTCGGATTCGCTTTCTACGTCTTCTTTGTTCCCTTTGTTGGTGGAGATAGG
CTGCAGTATTTGCTCATGGGCCTCTATACCCCACTGATCACCTGCGTTATCCTATTATAT
ATATGGTGTGCTGGAACAGATCCTGGTGATCCAGGCATTTTCTTAAATTCAAAAAGGCCA
CCTGAAAAGCAAGGAAGTTCAACTCACGAATATCCAGAAGGAGTGTCATTCAGCAATTGT
TGCAGGGTTGTTCATAACAGTGAGAATATAAGCAATAATTTTGAAGTAAAGGATTCATCT
TCATACCTGACATTTACCAGGGTTCTTTGCTTGATATACTTCCCGTTTTCTTGCTTATGC
AAAAGATGGTTCCACTCAGATGATCAATCTTCAGAACAGAACACAAGTGAAGAAGGCATG
TTTTTCTGCAGCTTGTGTAAAGCAGAGGTCTTGCAGCACAGTAAGCATTGTAGGGTTTGT
AACAAGTGTGTCGATGGCTTTGACCACCACTGTAGGTGGCTCAACAATTGCATAGGAAAA
AGAAACTACAAAGGATTCTTCATCCTATTGGCTTCAGCAGTTCTCTTGCTTATAATGAAG
TGGTTAGTGGGTGCTCTTGTGTTGATTCTTTTCTTTATGAAGCGGGGAGAATTCTCTGGG
CAGATAACCTCAAAACTTGGAAGCAGCTTCTCAGTTGTGGCTTTTGTAATTGTCGTGGTG
ACATGTACATTGCTAGCGATGGTTGCAACAATACCACTCTCACAACTTCTATGCTTCCAC
ATTCTTCTTATCAAGAAAGGAATTAGTACATACGATTATATTGTAGCTTTGAGAGAGCAA
GAGCAACAAGAACATTCGGAGCACCAGAGCCCACAGATATCCATCATTAGCTCTATCACA
GGACTTAGTACCAGTAGCTCTTTTGGTCCACTTCATCGTGGATCATGGTGTACTCCACCA
AGACTATTAGTTGAAGATCAGGATGTTTTTCATCCGGATATGCCACAGAATTCCACTGGC
AAGAAGGCCAGGAAAGACGAAGGAAGCAAAAGGAAACCACCAGGAGCTGTAAAAATCAGC
ACATGGTCACTGGCTCGCCTTAACGCAGAGGACGTCACGAAGGCAGCTGTTGAGGCCAAG
AAGAGATCTAAAGTCCTCCAGCCGATCACAAGGCGGGGGAATATTCTTAAACCTGACAAG
AGAACAGACAAAAGCAGGGTGTTCCTACCTGTACCTGAACAATCTCCGGATCCCATGGCA
AGGACATCCGCAAGTGGAACCGACGGTAATTTGAGCGACATGATGATGGAAACACCCGCT
AGCTTAGCCCCATTGCAGCACGAGGCCAGGAGTGACTACCAACCCAGTGCTGTGACGTCT
ATCATGAACCTCAACCTTACTTCATCACCGGAGAGTAGCTTGGAGTCACCTGATCTCCAC
CCCTTCCGTATCTCCATGTCAGGAGCAGATGAACTCCGAAGCTTCATGTCACTTGCAGCC
TCAGAGTCAACTGCTCAGAAGACTATTGCACTTTCGAGGTCGACAAGCGGTGGGTATGAA
GCCTCGGGAGGCGACGACAGCGACCAAATACCCTCTAGAATTGTGCACAGGTCGTCCAAT
TGGACAAATGTCATTCTCAATTCAGGTAGGCAGGCAACTATGTCCGATCTGAACTTGCCT
AGGCTACACCTGTAG

Peptide Sequence

PEP ID

Zm00001d030508_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:140235550:140243657:1 gene:Zm00001d030508 transcript:Zm00001d030508_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein S-acyltransferase 22
Sequence

MRRHGWQLPYHPLQVVAIAVFLALGFAFYVFFVPFVGGDRLQYLLMGLYTPLITCVILLY
IWCAGTDPGDPGIFLNSKRPPEKQGSSTHEYPEGVSFSNCCRVVHNSENISNNFEVKDSS
SYLTFTRVLCLIYFPFSCLCKRWFHSDDQSSEQNTSEEGMFFCSLCKAEVLQHSKHCRVC
NKCVDGFDHHCRWLNNCIGKRNYKGFFILLASAVLLLIMKWLVGALVLILFFMKRGEFSG
QITSKLGSSFSVVAFVIVVVTCTLLAMVATIPLSQLLCFHILLIKKGISTYDYIVALREQ
EQQEHSEHQSPQISIISSITGLSTSSSFGPLHRGSWCTPPRLLVEDQDVFHPDMPQNSTG
KKARKDEGSKRKPPGAVKISTWSLARLNAEDVTKAAVEAKKRSKVLQPITRRGNILKPDK
RTDKSRVFLPVPEQSPDPMARTSASGTDGNLSDMMMETPASLAPLQHEARSDYQPSAVTS
IMNLNLTSSPESSLESPDLHPFRISMSGADELRSFMSLAASESTAQKTIALSRSTSGGYE
ASGGDDSDQIPSRIVHRSSNWTNVILNSGRQATMSDLNLPRLHL

Transcript Sequence

Transcript ID

Zm00001d030508_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:140235550:140243657:1 gene:Zm00001d030508 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein S-acyltransferase 22
Sequence

AACCCACGGTCCACCGGAAGGCTTCCCTCTTTGATTTCGCATTTTGGTGCTCCCCGGCAG
CTGCGAGCGCCGCCGCCATTTACTCCCTGCCTCGGGGCGGACTCATTTCTCTGAGGGCTC
CTTCCTTCCTTGTTGGCGATGAGGAGGCACGGGTGGCAGCTACCCTACCATCCTCTCCAG
GTGGTGGCGATAGCGGTCTTCCTGGCGCTCGGATTCGCTTTCTACGTCTTCTTTGTTCCC
TTTGTTGGTGGAGATAGGCTGCAGTATTTGCTCATGGGCCTCTATACCCCACTGATCACC
TGCGTTATCCTATTATATATATGGTGTGCTGGAACAGATCCTGGTGATCCAGGCATTTTC
TTAAATTCAAAAAGGCCACCTGAAAAGCAAGGAAGTTCAACTCACGAATATCCAGAAGGA
GTGTCATTCAGCAATTGTTGCAGGGTTGTTCATAACAGTGAGAATATAAGCAATAATTTT
GAAGTAAAGGATTCATCTTCATACCTGACATTTACCAGGGTTCTTTGCTTGATATACTTC
CCGTTTTCTTGCTTATGCAAAAGATGGTTCCACTCAGATGATCAATCTTCAGAACAGAAC
ACAAGTGAAGAAGGCATGTTTTTCTGCAGCTTGTGTAAAGCAGAGGTCTTGCAGCACAGT
AAGCATTGTAGGGTTTGTAACAAGTGTGTCGATGGCTTTGACCACCACTGTAGGTGGCTC
AACAATTGCATAGGAAAAAGAAACTACAAAGGATTCTTCATCCTATTGGCTTCAGCAGTT
CTCTTGCTTATAATGAAGTGGTTAGTGGGTGCTCTTGTGTTGATTCTTTTCTTTATGAAG
CGGGGAGAATTCTCTGGGCAGATAACCTCAAAACTTGGAAGCAGCTTCTCAGTTGTGGCT
TTTGTAATTGTCGTGGTGACATGTACATTGCTAGCGATGGTTGCAACAATACCACTCTCA
CAACTTCTATGCTTCCACATTCTTCTTATCAAGAAAGGAATTAGTACATACGATTATATT
GTAGCTTTGAGAGAGCAAGAGCAACAAGAACATTCGGAGCACCAGAGCCCACAGATATCC
ATCATTAGCTCTATCACAGGACTTAGTACCAGTAGCTCTTTTGGTCCACTTCATCGTGGA
TCATGGTGTACTCCACCAAGACTATTAGTTGAAGATCAGGATGTTTTTCATCCGGATATG
CCACAGAATTCCACTGGCAAGAAGGCCAGGAAAGACGAAGGAAGCAAAAGGAAACCACCA
GGAGCTGTAAAAATCAGCACATGGTCACTGGCTCGCCTTAACGCAGAGGACGTCACGAAG
GCAGCTGTTGAGGCCAAGAAGAGATCTAAAGTCCTCCAGCCGATCACAAGGCGGGGGAAT
ATTCTTAAACCTGACAAGAGAACAGACAAAAGCAGGGTGTTCCTACCTGTACCTGAACAA
TCTCCGGATCCCATGGCAAGGACATCCGCAAGTGGAACCGACGGTAATTTGAGCGACATG
ATGATGGAAACACCCGCTAGCTTAGCCCCATTGCAGCACGAGGCCAGGAGTGACTACCAA
CCCAGTGCTGTGACGTCTATCATGAACCTCAACCTTACTTCATCACCGGAGAGTAGCTTG
GAGTCACCTGATCTCCACCCCTTCCGTATCTCCATGTCAGGAGCAGATGAACTCCGAAGC
TTCATGTCACTTGCAGCCTCAGAGTCAACTGCTCAGAAGACTATTGCACTTTCGAGGTCG
ACAAGCGGTGGGTATGAAGCCTCGGGAGGCGACGACAGCGACCAAATACCCTCTAGAATT
GTGCACAGGTCGTCCAATTGGACAAATGTCATTCTCAATTCAGGTAGGCAGGCAACTATG
TCCGATCTGAACTTGCCTAGGCTACACCTGTAGGGTTCATAACTAACACCAGGCTGACAT
AGCTCAAAATTGTGAGTTGCTGACTTCTTAATTAGCTATGTGTTGTTAGCCTGTGAGCAT
GCATTGGTCAGAACCAGTGTTGGGAACCTGGTTTTTGGGTTTAAGAGTCGGGTTATGTTT
TGCGATCAATAAATACATGTGCCTTTCCAAGCTGT