Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d030468_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:134962829:134965595:-1 gene:Zm00001d030468 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylanase1 description:Glycosyl hydrolase family 10 protein
Sequence	ATGAGGGTTCTTGTAGAGAAGCTGTTAGTCTCTGTGTTTTTAGCAGCATTCTATTCAGGG TGCATGGTCGTGTCTCTAGAATATGATCACACGGCAAGCATCGAGGCAAGTGTTGTCCAC TGCCTTGGCGACCCAATGAAACCCTTGTACAAGGGCGGCATTGTCCAGAACAGCGAGTTC AACAGCGGACTGATGGGCTGGTCGACACACCGGAACGTCAAGGCCGGCGTGAGCAGATCG CCGTCCGGCAACAAGTTTGCAGTGGTGCATGGGGCGGGAAGCTACGTGAGCAGCAGCGGC AAGCTCCTACCGTCCCACAGCGTGTACCAGAGAATCCAGATGCAGAGCGACAGGCACTAC TCGCTATCAGCATGGCTGCAGGTGTCGAACGGCACGTCGGCACATGTGAGGGCGGTGATC AAGTCCCCCAACGGCGAACGCGTCATCGCTGGTGCCATCGTTGCCCAGTCGGGCTGCTGG AGCATGCTCAAGGGAGGCATGACCGCTTACTCTTCGGGACCCGCAGAGATCTACTTTGAG AGCCACGCACCAGTTGACATCTGGGTGGACAGTGTCTCGCTGCAGCCCTTCACCTTCGAC GAGTGGGACGGTCACACCCGCCGCTCCGCCGACAAGGTCCGCCGGCGAACCGTGAAGGTG GTCGCCATGGGCGCCAACGACAAGCCGATGGCGCATGCCAACGTGAGCATCGAGCTCCTC CGCCTCGGCTTCCCGTTCGGCAACGCGGTCACCAAGGAGATCCTCGGCCTCCCGGCATAC GAGAAGTGGTTCACGTCGCGCTTCAGCGTGGCCACCTTCGAGAACGAGATGAAGTGGTAC AGCACCGAGTGGACCCAGAACCATGAGGACTACCGCGTTCCGGACGCCATGATGAACCTG ATGCGCAAGTACAAGATCAAGGTGCGCGGGCACAACGTGTTCTGGGACGACCAGAACTCG CAGATGCAGTGGGTGAAGCCCCTCAACCTTGCGCAGCTCAAGGCAGCCATGCAGAAGCGG CTCAAGTCCGTCGTGTCACGCTACGCCGGCAAGGTCATCCACTGGGACGTGGTGAACGAG AACCTGCACTTCAACTTCTTCGAGACGAAGCTGGGCCCCATGGCGTCGGCACAGATCTAC CAGCAGGTGGGGCAGCTGGACCGCAATGCCATCCTATTCATGAACGAATTCAACACGCTG GAGCAGCCCGGCGATCCCAACCCTGTGCCCGCCAAGTACGTGGCCAAGATGAACCAGATC CGCGGCTACGCCGGCAACGGTGGCCTCAAGCTCGGCGTCGGCCTCGAGAGCCACTTCAGC ACACCCAACATCCCGTACATGAGGAGCTCGCTGGACACGCTCGCCAAGCTGAAGCTGCCC ATGTGGCTCACCGAGGTGGATGTCGTCAAGAGCCCCAACCAGGTCAAGTACCTGGAGCAG GTGCTCAGGGAAGGCTTCGCCCACCCCAACGTCGACGGCATCGTCATGTGGGCAGCGTGG CATGCCAGGGGCTGCTACGTCATGTGCCTCACGGACAACAGCTTCAAGAACCTCCCCGTG GGCGACCTCGTCGACAAGCTCATCGCCGAGTGGAAGACGCACCGCGCGTCCGCCACCACC GATCACAATGGGGCGGTGGAGCTCCACCTGCCCCTAGGCGACTTTAAGTTCACCGTAAGC CACCCATCTTTGAAAGCCGCTGCTGTTCAAACCATGACCGTCGACAATTCGGCGTCGGCG TCCCAGCATACCATCAACGTCAAGTCCTAG

Peptide Sequence

PEP ID	Zm00001d030468_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:134962829:134965595:-1 gene:Zm00001d030468 transcript:Zm00001d030468_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylanase1 description:Glycosyl hydrolase family 10 protein
Sequence	MRVLVEKLLVSVFLAAFYSGCMVVSLEYDHTASIEASVVHCLGDPMKPLYKGGIVQNSEF NSGLMGWSTHRNVKAGVSRSPSGNKFAVVHGAGSYVSSSGKLLPSHSVYQRIQMQSDRHY SLSAWLQVSNGTSAHVRAVIKSPNGERVIAGAIVAQSGCWSMLKGGMTAYSSGPAEIYFE SHAPVDIWVDSVSLQPFTFDEWDGHTRRSADKVRRRTVKVVAMGANDKPMAHANVSIELL RLGFPFGNAVTKEILGLPAYEKWFTSRFSVATFENEMKWYSTEWTQNHEDYRVPDAMMNL MRKYKIKVRGHNVFWDDQNSQMQWVKPLNLAQLKAAMQKRLKSVVSRYAGKVIHWDVVNE NLHFNFFETKLGPMASAQIYQQVGQLDRNAILFMNEFNTLEQPGDPNPVPAKYVAKMNQI RGYAGNGGLKLGVGLESHFSTPNIPYMRSSLDTLAKLKLPMWLTEVDVVKSPNQVKYLEQ VLREGFAHPNVDGIVMWAAWHARGCYVMCLTDNSFKNLPVGDLVDKLIAEWKTHRASATT DHNGAVELHLPLGDFKFTVSHPSLKAAAVQTMTVDNSASASQHTINVKS

Transcript Sequence

Transcript ID	Zm00001d030468_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:134962829:134965595:-1 gene:Zm00001d030468 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylanase1 description:Glycosyl hydrolase family 10 protein
Sequence	ATATTGTCAATAGTAACAGTGAGAAGAACACACAAAATGAGGGTTCTTGTAGAGAAGCTG TTAGTCTCTGTGTTTTTAGCAGCATTCTATTCAGGGTGCATGGTCGTGTCTCTAGAATAT GATCACACGGCAAGCATCGAGGCAAGTGTTGTCCACTGCCTTGGCGACCCAATGAAACCC TTGTACAAGGGCGGCATTGTCCAGAACAGCGAGTTCAACAGCGGACTGATGGGCTGGTCG ACACACCGGAACGTCAAGGCCGGCGTGAGCAGATCGCCGTCCGGCAACAAGTTTGCAGTG GTGCATGGGGCGGGAAGCTACGTGAGCAGCAGCGGCAAGCTCCTACCGTCCCACAGCGTG TACCAGAGAATCCAGATGCAGAGCGACAGGCACTACTCGCTATCAGCATGGCTGCAGGTG TCGAACGGCACGTCGGCACATGTGAGGGCGGTGATCAAGTCCCCCAACGGCGAACGCGTC ATCGCTGGTGCCATCGTTGCCCAGTCGGGCTGCTGGAGCATGCTCAAGGGAGGCATGACC GCTTACTCTTCGGGACCCGCAGAGATCTACTTTGAGAGCCACGCACCAGTTGACATCTGG GTGGACAGTGTCTCGCTGCAGCCCTTCACCTTCGACGAGTGGGACGGTCACACCCGCCGC TCCGCCGACAAGGTCCGCCGGCGAACCGTGAAGGTGGTCGCCATGGGCGCCAACGACAAG CCGATGGCGCATGCCAACGTGAGCATCGAGCTCCTCCGCCTCGGCTTCCCGTTCGGCAAC GCGGTCACCAAGGAGATCCTCGGCCTCCCGGCATACGAGAAGTGGTTCACGTCGCGCTTC AGCGTGGCCACCTTCGAGAACGAGATGAAGTGGTACAGCACCGAGTGGACCCAGAACCAT GAGGACTACCGCGTTCCGGACGCCATGATGAACCTGATGCGCAAGTACAAGATCAAGGTG CGCGGGCACAACGTGTTCTGGGACGACCAGAACTCGCAGATGCAGTGGGTGAAGCCCCTC AACCTTGCGCAGCTCAAGGCAGCCATGCAGAAGCGGCTCAAGTCCGTCGTGTCACGCTAC GCCGGCAAGGTCATCCACTGGGACGTGGTGAACGAGAACCTGCACTTCAACTTCTTCGAG ACGAAGCTGGGCCCCATGGCGTCGGCACAGATCTACCAGCAGGTGGGGCAGCTGGACCGC AATGCCATCCTATTCATGAACGAATTCAACACGCTGGAGCAGCCCGGCGATCCCAACCCT GTGCCCGCCAAGTACGTGGCCAAGATGAACCAGATCCGCGGCTACGCCGGCAACGGTGGC CTCAAGCTCGGCGTCGGCCTCGAGAGCCACTTCAGCACACCCAACATCCCGTACATGAGG AGCTCGCTGGACACGCTCGCCAAGCTGAAGCTGCCCATGTGGCTCACCGAGGTGGATGTC GTCAAGAGCCCCAACCAGGTCAAGTACCTGGAGCAGGTGCTCAGGGAAGGCTTCGCCCAC CCCAACGTCGACGGCATCGTCATGTGGGCAGCGTGGCATGCCAGGGGCTGCTACGTCATG TGCCTCACGGACAACAGCTTCAAGAACCTCCCCGTGGGCGACCTCGTCGACAAGCTCATC GCCGAGTGGAAGACGCACCGCGCGTCCGCCACCACCGATCACAATGGGGCGGTGGAGCTC CACCTGCCCCTAGGCGACTTTAAGTTCACCGTAAGCCACCCATCTTTGAAAGCCGCTGCT GTTCAAACCATGACCGTCGACAATTCGGCGTCGGCGTCCCAGCATACCATCAACGTCAAG TCCTAGGAGACGACATCAGGCACTCTGTGGCGGATCTTTAATTAATTTCTTCTTTATTTT TCATTCTGGTGAATAAATAGGTCCCAAAGAGAGAGATAAAAGGAGAAGGAAAGGAGACGT GGCAGCATGGCCACGTTAGTGATTTTTTGTTCGGTGATTTTTTTTTGTAAGCTATATATA GATAGAGAGTAGTCATTTTTAAGTTATTAATTATATAGTTGCAAATGCGCACGTTAATGG TTGTCAATAGCTTTGTCACATCTATATGGATTCCTAGTAATACACATAAACATTACAGAT CTTTGAACTA