Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030372_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:126990768:126997787:1 gene:Zm00001d030372 gene_biotype:protein_coding transcript_biotype:protein_coding description:cytochrome P450 family 76 subfamily C polypeptide 7
Sequence

ATGGCTATGCTAGTTCTGTGGCTGGCATGGCTTCTAGTCTCTCTGATCGCAGTATACTTC
CTCGACCTCTATGTCCACGCTCGCCGGGGCCTTCCGCCCGGACCCCGCCCACTGCCGTTA
ATCGGCAGCCTCCACCTTCTTGGCGACCAGCCACACCGCTCACTCGCTCGCCTCGCCAAA
TTCCACGGCCCGCTCATGTCGCTCCGTCTGGGCGCGGTCACCACGGTTGTGATCTCCTCA
CCGGATGTTGCGCGCGAGTTCCTGCAGAAGCAGGACGCTGTCTTCGCCAATCGGTTTGTG
CCCCATGCCATCGGCGACCATGTGAAGAACTCCGTGCCCTGGTTGCCGCACTCCGGACGC
TGGCGCGCCCTCAGAAAGATCATGGCAACTGAGCTGTTCGCGCCGCACCGCCTCGAGGCG
CTCCAGCATCTACGCCGCCAGAAGGTGGAGGAACTCGTGGGCCACGTCCGGCTACTGGCA
CTGCAGGGACGGGCGGTGGACGTCGGCAGCGTGGCGTTCACCACGTCCCTGAATCTTCTC
TCGCGCACAATTTTCTCCTGCGACCTGACGAACCTCGACGACCACACCGGATCGGCGAAA
GAATTCCAAGAGGTGGTGACAGAGATCATGGAGGTTGCCGCGAGTCCCAACCTGTCGGAT
TTGTTCCCAGCGCTGGCTTGCGCCGATCTGCAAGGATTGCGACGGAGACTGGCAAAGCTC
TTTGCACGGCTGCACCAGGTGTTCGACGTGGAGGTCGACCGGAGGTTGTGCGAGCGTGAT
GCTGGCGATCGCCGGAAGAATGACTTCCTCGACCTGTTGCTTGACACCGACGGAGGGACG
GCAGCGTTGGACCGCGACTCGCTCCTGTCATTATTCACGGATTTGTTTGCTGCAGGAAGT
GATACGAGCTCCAGCACAGTGGAATGGGCACTGACGGAGTTGCTTAGAAACCCAGTCCCA
ATGGCTAAAACGTGCGATGAGCTCCTGGCAGCCACTGGCGCGGCAAGAAACATTGAAGAA
TCTGAAATCGAGCAGCTGCCCTACCTCCAAGCCGTGGTAAAAGAAACTTTTCGGCTGCAT
CCTCCCGTCCCACTGCTGTTGCCGCGACGAGCTGGGGCCGCCACGCGAGCAATGGGTCAC
ACGATTCCCAAAGGCGCACGCGTGCTGGTAAATGTGTGGGCGATGGGGCGGGACGGAGAC
GTTTTGCCAGATCCAGAGAAGTTTATGCCAGAACGATTCCTGGGAAGGCCTACGGATTTT
AGAGGTGGAGACTTGGAACTCATACCGTTTGGTGCAGGACGCAGGATCTGTCCTGGGATG
CCACTGGCCAGCAGGATGGTGCATCTGGTCCTTGCATCGTTGTTGAATCAGTTCAGATGG
AGGCTTCCCGCCGAGGTCGAAAGAGATGGGACTGACGAAATGGCTGAGAGTTTTGGTGTC
ACTCTAAAGAAGGCGTCGCCTCTTTGTGCTATAGCCACACCTGTTTGA

Peptide Sequence

PEP ID

Zm00001d030372_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:126990768:126997787:1 gene:Zm00001d030372 transcript:Zm00001d030372_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:cytochrome P450 family 76 subfamily C polypeptide 7
Sequence

MAMLVLWLAWLLVSLIAVYFLDLYVHARRGLPPGPRPLPLIGSLHLLGDQPHRSLARLAK
FHGPLMSLRLGAVTTVVISSPDVAREFLQKQDAVFANRFVPHAIGDHVKNSVPWLPHSGR
WRALRKIMATELFAPHRLEALQHLRRQKVEELVGHVRLLALQGRAVDVGSVAFTTSLNLL
SRTIFSCDLTNLDDHTGSAKEFQEVVTEIMEVAASPNLSDLFPALACADLQGLRRRLAKL
FARLHQVFDVEVDRRLCERDAGDRRKNDFLDLLLDTDGGTAALDRDSLLSLFTDLFAAGS
DTSSSTVEWALTELLRNPVPMAKTCDELLAATGAARNIEESEIEQLPYLQAVVKETFRLH
PPVPLLLPRRAGAATRAMGHTIPKGARVLVNVWAMGRDGDVLPDPEKFMPERFLGRPTDF
RGGDLELIPFGAGRRICPGMPLASRMVHLVLASLLNQFRWRLPAEVERDGTDEMAESFGV
TLKKASPLCAIATPV

Transcript Sequence

Transcript ID

Zm00001d030372_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:126990768:126997787:1 gene:Zm00001d030372 gene_biotype:protein_coding transcript_biotype:protein_coding description:cytochrome P450 family 76 subfamily C polypeptide 7
Sequence

GTGATGGGCTGATGGCTATGCTAGTTCTGTGGCTGGCATGGCTTCTAGTCTCTCTGATCG
CAGTATACTTCCTCGACCTCTATGTCCACGCTCGCCGGGGCCTTCCGCCCGGACCCCGCC
CACTGCCGTTAATCGGCAGCCTCCACCTTCTTGGCGACCAGCCACACCGCTCACTCGCTC
GCCTCGCCAAATTCCACGGCCCGCTCATGTCGCTCCGTCTGGGCGCGGTCACCACGGTTG
TGATCTCCTCACCGGATGTTGCGCGCGAGTTCCTGCAGAAGCAGGACGCTGTCTTCGCCA
ATCGGTTTGTGCCCCATGCCATCGGCGACCATGTGAAGAACTCCGTGCCCTGGTTGCCGC
ACTCCGGACGCTGGCGCGCCCTCAGAAAGATCATGGCAACTGAGCTGTTCGCGCCGCACC
GCCTCGAGGCGCTCCAGCATCTACGCCGCCAGAAGGTGGAGGAACTCGTGGGCCACGTCC
GGCTACTGGCACTGCAGGGACGGGCGGTGGACGTCGGCAGCGTGGCGTTCACCACGTCCC
TGAATCTTCTCTCGCGCACAATTTTCTCCTGCGACCTGACGAACCTCGACGACCACACCG
GATCGGCGAAAGAATTCCAAGAGGTGGTGACAGAGATCATGGAGGTTGCCGCGAGTCCCA
ACCTGTCGGATTTGTTCCCAGCGCTGGCTTGCGCCGATCTGCAAGGATTGCGACGGAGAC
TGGCAAAGCTCTTTGCACGGCTGCACCAGGTGTTCGACGTGGAGGTCGACCGGAGGTTGT
GCGAGCGTGATGCTGGCGATCGCCGGAAGAATGACTTCCTCGACCTGTTGCTTGACACCG
ACGGAGGGACGGCAGCGTTGGACCGCGACTCGCTCCTGTCATTATTCACGGATTTGTTTG
CTGCAGGAAGTGATACGAGCTCCAGCACAGTGGAATGGGCACTGACGGAGTTGCTTAGAA
ACCCAGTCCCAATGGCTAAAACGTGCGATGAGCTCCTGGCAGCCACTGGCGCGGCAAGAA
ACATTGAAGAATCTGAAATCGAGCAGCTGCCCTACCTCCAAGCCGTGGTAAAAGAAACTT
TTCGGCTGCATCCTCCCGTCCCACTGCTGTTGCCGCGACGAGCTGGGGCCGCCACGCGAG
CAATGGGTCACACGATTCCCAAAGGCGCACGCGTGCTGGTAAATGTGTGGGCGATGGGGC
GGGACGGAGACGTTTTGCCAGATCCAGAGAAGTTTATGCCAGAACGATTCCTGGGAAGGC
CTACGGATTTTAGAGGTGGAGACTTGGAACTCATACCGTTTGGTGCAGGACGCAGGATCT
GTCCTGGGATGCCACTGGCCAGCAGGATGGTGCATCTGGTCCTTGCATCGTTGTTGAATC
AGTTCAGATGGAGGCTTCCCGCCGAGGTCGAAAGAGATGGGACTGACGAAATGGCTGAGA
GTTTTGGTGTCACTCTAAAGAAGGCGTCGCCTCTTTGTGCTATAGCCACACCTGTTTGAA
TGAGAAGCCCAGATCGACAGGGTCAAAAAAAAAAGTATTGAGTGTTCTTCTGTTGAATAA
TGTTTCTTGCAAGTCATTGAAGTCATTACGAGTCTTACGGTGATTGGCAAAAATTTAGAG
GCCGTCCAACGGGAAGAAATCTACCGATGATAAAACAGGTATTATTTTATTAATGTTAAA
TCTTTAAAATGTCACAATATTGATGG