Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030314_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:121820597:121821836:-1 gene:Zm00001d030314 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline-rich protein

Sequence

ATGGCACCAGAAACGATGCTCCTCGGCGTCTGTGCCGTGCTGATGGTGGTCGGCGTCACG
AACGCGGCGGAGGGCCAGGTGGCGTCGGTCGTCGTGGGCCTGGCGAGGTGCGCCGACAGC
ACGAGGAAGAACATGAAGGCTGAGGCCGGTTTCAAGGGTCTTCAGGTGGCGATCAAGTGC
AAGAACAGCAACGGCGAGTACGAGACAAAGGCCGTGAGTGAGATCCAAAGCTCCGGAGCC
TTCAGCGTCCCACTCGCCGCCGACCTCCACGGCGCCGACTGCCACGCGCAGCTCCACAGC
GCCGCCAATAACGCGCCTTGCCCTGGGCAGGAGCCGTCCAGGATCGCGCCCATGTCAGGC
GGCACCTTCGTCGCCGTGCCTGGCAAGATGCACTACCCGTCCGCGGAGTGCGCGTCCGCG
TTTCTCTGCTCCCCGATCAAGAAGCACTTGTTAGATCACTTCCACAAGGCACCCCTGCCG
GTGCCGGAGTACCACCCGGTGCCTGACCACAGCAAGCCGCCGGTGCCGGAGTACCACCCG
GTGCCTGAGCACAGCAAGCCGGCGCCGGAGTACCACCCTCCCACGCCGGAATACCACCCT
CCCACTCCAGTGTACGGGCAGCCAAAGCCAACTCCGATCTACCATCCTCCCGCTGAGCAC
TGA

Peptide Sequence

PEP ID

Zm00001d030314_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:121820597:121821836:-1 gene:Zm00001d030314 transcript:Zm00001d030314_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline-rich protein

Sequence

MAPETMLLGVCAVLMVVGVTNAAEGQVASVVVGLARCADSTRKNMKAEAGFKGLQVAIKC
KNSNGEYETKAVSEIQSSGAFSVPLAADLHGADCHAQLHSAANNAPCPGQEPSRIAPMSG
GTFVAVPGKMHYPSAECASAFLCSPIKKHLLDHFHKAPLPVPEYHPVPDHSKPPVPEYHP
VPEHSKPAPEYHPPTPEYHPPTPVYGQPKPTPIYHPPAEH

Transcript Sequence

Transcript ID

Zm00001d030314_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:121820597:121821836:-1 gene:Zm00001d030314 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline-rich protein

Sequence

CTCCACTACACACAAACACACAATGGCACCAGAAACGATGCTCCTCGGCGTCTGTGCCGT
GCTGATGGTGGTCGGCGTCACGAACGCGGCGGAGGGCCAGGTGGCGTCGGTCGTCGTGGG
CCTGGCGAGGTGCGCCGACAGCACGAGGAAGAACATGAAGGCTGAGGCCGGTTTCAAGGG
TCTTCAGGTGGCGATCAAGTGCAAGAACAGCAACGGCGAGTACGAGACAAAGGCCGTGAG
TGAGATCCAAAGCTCCGGAGCCTTCAGCGTCCCACTCGCCGCCGACCTCCACGGCGCCGA
CTGCCACGCGCAGCTCCACAGCGCCGCCAATAACGCGCCTTGCCCTGGGCAGGAGCCGTC
CAGGATCGCGCCCATGTCAGGCGGCACCTTCGTCGCCGTGCCTGGCAAGATGCACTACCC
GTCCGCGGAGTGCGCGTCCGCGTTTCTCTGCTCCCCGATCAAGAAGCACTTGTTAGATCA
CTTCCACAAGGCACCCCTGCCGGTGCCGGAGTACCACCCGGTGCCTGACCACAGCAAGCC
GCCGGTGCCGGAGTACCACCCGGTGCCTGAGCACAGCAAGCCGGCGCCGGAGTACCACCC
TCCCACGCCGGAATACCACCCTCCCACTCCAGTGTACGGGCAGCCAAAGCCAACTCCGAT
CTACCATCCTCCCGCTGAGCACTGAGTTCGATCAACAACGAACGCCAGAGCTAGAAGAAC
GGCAGGCTTCTGTTAGTTATTAATTCAGTACTGCACGTGTTACTAGTGCGCCTCATGCAT
GGAGAATAAAATGGTGTGAAATATAGCTGGGAGCTTGTACTTTATTAGTTATCGATTGTT
GTTTATCTTTAACTTGCTTACCGAAATCGTGTTGTGCATCTTGTCTTTTTGTCAATGTAA
GCAGAGCCTGTTCTCA