Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030285_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:1:119480915:119493696:-1 gene:Zm00001d030285 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable alpha-mannosidase

Sequence

ATGGTGATGGCGCCGGCGATTCTGCTGGCAGTGCTAGTGCTCGCGGCGGTGGCAGCGGCG
ACGGCGGTGGTGGCCGGGAAGCTGAACGTGCACCTGGTGCCTCACTCCCACGACGACGTC
GGGTGGCTCAAGACCGTCGACCAGTACTATGTCGGCTCCAACAACAGCATCCAGGGCGCG
TGCGTGATGAACACCCTCGACTCCGTGGTGGACGCGCTCGCCAGGGATCCCGCCCGCAAG
TTCGTCGTCGTCGAGCAGGCTTTCTTCCAAAGGTGGTGGGCCGAGAAAAGCCCCACAATC
CAGGACATAGTCCACAAACTGGTTGATTCCGGACAGCTAGAGTTCATAAATGGTGGGTGG
TGTATGCACGATGAAGCTGCCGTGCATTACATTGACATGATTGATCAGACCACGCTTGGT
CACCGGATGATCAAGAAACAGTTCAATAAGACTCCAAGAGCTGGCTGGCAAATTGATCCT
TTTGGTCACTCTGCAGTGCAAGCTTATTTGCTTGGAGCAGAGCTTGGTTTTGATTCTGTA
CATTTCGCAAGAATTGATTACCAAGATAGGGCAACACGGAAAGCAGACAAAGGCCTAGAG
GTTATATGGCGTGGCTCAAGAACTTTCGGCTCATCTTCACAGATCTTCACGAATGCCTTT
CCTGTCCATTATAGCCCACCAGATGGCTTTGGCTTCGAAGTTTTGGATGAAAATATCATA
CCTGTTCAGGATGACCTGTCACTTTTTGACTACAATGTCCAAGAACGTGTAGATGATTTT
GTTGCTGCAGCCTTAGCACAGGCAAATGTTACACGTACAGACCACATAATGTGGACCATG
GGGGATGATTTTAACTACCAGTACGCTGAATCCTGGTTCCGGAATATGGACAAACTTATC
CAACATGTGAACAAGGACGGCAGAGTGCATGCGTTGTATTCTACTCCGTCTATCTACACA
GATGCTAAGCATGCATCGAATGAATCTTGGCCAGTAAAATATGACGACTATTTCCCCTAC
GCTGATTCAACGAATGCATACTGGACTGGGTACTTTACGAGCCGTCCAACTTTCAAGCGA
TATGTTCGAGTACACAGCGGATACTACTTGGCTGCACGTCAGATAGAGTTTTTGGTGGGC
GGTAGGAGCTCCTTGGGATTGTTCACTTCCAGCTTGGAAGATGCGATGGGGATTGCCCAG
CATCACGATGCAGTCTCAGGTACTGCGAAACAGCACACGACTGATGACTACGCGAAACGG
CTTGCGCTGGGAGCAGCAAAGGTTGAAAAAGGTGTAAACACCGCTCTGGCTTGTCTGACC
AGCTCCAACGGGACATGTGGATCCTCTGTTGTAAAATTTAGTCAGTGTTCACTTCTCAAT
ATAAGCTACTGCCCTTCGACCGAGGAAGCAATTTCATCAACAAAGCGTTTAGTTGTAGTT
GTTTACAATCCTCTTGGATGGGAACGTAGTGACTTCATAAGAGTTCCTGTCAATGATCAA
AACCTAGTTGTAAAAGGCTCTGATGGAAATATTGTTGAGTCACAGCTAGTTGAGGTTGAT
AATGTGACGAGAAATTTAAGAAAGTTTTATGTGAAGGCTTATCTTGGAATCACAACACAC
AAGGCCCCTAAGTATTGGCTACTATTTCAAGCTTCTGTACCACCAATGGGCTGGAATTCC
TACTTCATTTCAAAATCAACTGGAGCAGGATACAACAGTACTGAGCATGTCTCGGACGTG
GTTTCCCCAAGTAACAGCACGATTGAAGTTGGACCAGGACATCTAAAGATGTCCTTCTCA
AAAGCATCTGGACAACTCAATAGGATATTCAATTCCATCTCAGGAGTGGATTTACCAGTT
CAACAAAGCTTTCTTTGGTACAGATCAAGTGAGGGTGATGCCTCAGACTCACAGGCATCT
GGAGCATATATATTTCGACCAGATGGTAATACACCGACTACGGTTTCATCCTCGGTGCCA
CTGAAAGTTATCCGTGGACCACTGGTTGACGAAGTGCATCAGCAATTCAGCTCATGGATT
TATCAGATAACACGACTCTACAAAAACAAGGAGCATGCTGAAGTTGAATACACGATTGGG
CCGATCCCTGTCGATGATGATGTAGGGAAGGAGGTCATCACACGGCTGACAGCAAATATG
GTCACAAACAGTACGTTTTATACAGACTCCAATGGAAGGGATTTCCTCAAAAGGGTGAGA
AACTACAGGGAGGACTGGAATCTTCAAGTAACTCAACCAGTTGCAGGAAATTACTATCCG
GTGAACCTAGGAGTGTATGTAGCAGATGAAAAATATGAGCTATCTGTGCTTGTGGACCGT
GCTGTCGGAGCATCAAGCATTCAGGATGGTCAGCTAGAGATTATGCTACACAGGCGTTTA
CTTAAGGATGATGGCAGGGGTGTCGGAGAGCCACTTGACGAGGTGGTTTGCGTGGATCAA
GATTGCCAAGGGCTTACGGCCAGGGGCAATTACTACGTCAATGTCGAGAAGCTAGGGCAT
GGAGCTCACTGGCGACGTACATATGGCCAGCAAGTCTACTCACCCTTTCTCCTTGCTTTC
ACTCATGAGGATGAGACCAGCTCGAAATCCTACAGCGTGGCCAAAGCTGGTATGATGAAT
GCCAACTACAGCCTTCCTGATAATGTCGCCATTGTTACTTTGCAGAATCTAGATGATGGT
ACCACACTACTCCGCTTGGCCCATCTCTTTCAAGCTGCTGAGGACCCGAGATATTCCAAG
GTGGCAAAGGTTGATCTGAAAAAGGTGTTCGGAAAGAGAACTATCAAGGAATTGACGGAG
ACTAGCCTCTCCGCGAACCAAAAGAAGTCAGACATGAAGAAGCTCAGCTGGAGGGTCATT
GGGAACACTGAAACTGGTCCTGCCGCAGTAAAAGGTGGCCCAGTTGACAGTAGGGCTCTA
GTCGTTGAACTAGGACCCATGGAGATACGCACCTTCTTGCTGAAATTTTAG

Peptide Sequence

PEP ID

Zm00001d030285_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:1:119480915:119493696:-1 gene:Zm00001d030285 transcript:Zm00001d030285_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable alpha-mannosidase

Sequence

MVMAPAILLAVLVLAAVAAATAVVAGKLNVHLVPHSHDDVGWLKTVDQYYVGSNNSIQGA
CVMNTLDSVVDALARDPARKFVVVEQAFFQRWWAEKSPTIQDIVHKLVDSGQLEFINGGW
CMHDEAAVHYIDMIDQTTLGHRMIKKQFNKTPRAGWQIDPFGHSAVQAYLLGAELGFDSV
HFARIDYQDRATRKADKGLEVIWRGSRTFGSSSQIFTNAFPVHYSPPDGFGFEVLDENII
PVQDDLSLFDYNVQERVDDFVAAALAQANVTRTDHIMWTMGDDFNYQYAESWFRNMDKLI
QHVNKDGRVHALYSTPSIYTDAKHASNESWPVKYDDYFPYADSTNAYWTGYFTSRPTFKR
YVRVHSGYYLAARQIEFLVGGRSSLGLFTSSLEDAMGIAQHHDAVSGTAKQHTTDDYAKR
LALGAAKVEKGVNTALACLTSSNGTCGSSVVKFSQCSLLNISYCPSTEEAISSTKRLVVV
VYNPLGWERSDFIRVPVNDQNLVVKGSDGNIVESQLVEVDNVTRNLRKFYVKAYLGITTH
KAPKYWLLFQASVPPMGWNSYFISKSTGAGYNSTEHVSDVVSPSNSTIEVGPGHLKMSFS
KASGQLNRIFNSISGVDLPVQQSFLWYRSSEGDASDSQASGAYIFRPDGNTPTTVSSSVP
LKVIRGPLVDEVHQQFSSWIYQITRLYKNKEHAEVEYTIGPIPVDDDVGKEVITRLTANM
VTNSTFYTDSNGRDFLKRVRNYREDWNLQVTQPVAGNYYPVNLGVYVADEKYELSVLVDR
AVGASSIQDGQLEIMLHRRLLKDDGRGVGEPLDEVVCVDQDCQGLTARGNYYVNVEKLGH
GAHWRRTYGQQVYSPFLLAFTHEDETSSKSYSVAKAGMMNANYSLPDNVAIVTLQNLDDG
TTLLRLAHLFQAAEDPRYSKVAKVDLKKVFGKRTIKELTETSLSANQKKSDMKKLSWRVI
GNTETGPAAVKGGPVDSRALVVELGPMEIRTFLLKF

Transcript Sequence

Transcript ID

Zm00001d030285_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:119480915:119493696:-1 gene:Zm00001d030285 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable alpha-mannosidase

Sequence

AACCCAAAGGTTCGTCCGCATTGTCGGCCAGCCAGCTCCCACTCCACTGCCCGTTCCGTT
CTGCGCTCGTCATCGTCGGGGCCGGCCGGGCAAGCCATCAGCGGCCGTGATGGTGATGGC
GCCGGCGATTCTGCTGGCAGTGCTAGTGCTCGCGGCGGTGGCAGCGGCGACGGCGGTGGT
GGCCGGGAAGCTGAACGTGCACCTGGTGCCTCACTCCCACGACGACGTCGGGTGGCTCAA
GACCGTCGACCAGTACTATGTCGGCTCCAACAACAGCATCCAGGGCGCGTGCGTGATGAA
CACCCTCGACTCCGTGGTGGACGCGCTCGCCAGGGATCCCGCCCGCAAGTTCGTCGTCGT
CGAGCAGGCTTTCTTCCAAAGGTGGTGGGCCGAGAAAAGCCCCACAATCCAGGACATAGT
CCACAAACTGGTTGATTCCGGACAGCTAGAGTTCATAAATGGTGGGTGGTGTATGCACGA
TGAAGCTGCCGTGCATTACATTGACATGATTGATCAGACCACGCTTGGTCACCGGATGAT
CAAGAAACAGTTCAATAAGACTCCAAGAGCTGGCTGGCAAATTGATCCTTTTGGTCACTC
TGCAGTGCAAGCTTATTTGCTTGGAGCAGAGCTTGGTTTTGATTCTGTACATTTCGCAAG
AATTGATTACCAAGATAGGGCAACACGGAAAGCAGACAAAGGCCTAGAGGTTATATGGCG
TGGCTCAAGAACTTTCGGCTCATCTTCACAGATCTTCACGAATGCCTTTCCTGTCCATTA
TAGCCCACCAGATGGCTTTGGCTTCGAAGTTTTGGATGAAAATATCATACCTGTTCAGGA
TGACCTGTCACTTTTTGACTACAATGTCCAAGAACGTGTAGATGATTTTGTTGCTGCAGC
CTTAGCACAGGCAAATGTTACACGTACAGACCACATAATGTGGACCATGGGGGATGATTT
TAACTACCAGTACGCTGAATCCTGGTTCCGGAATATGGACAAACTTATCCAACATGTGAA
CAAGGACGGCAGAGTGCATGCGTTGTATTCTACTCCGTCTATCTACACAGATGCTAAGCA
TGCATCGAATGAATCTTGGCCAGTAAAATATGACGACTATTTCCCCTACGCTGATTCAAC
GAATGCATACTGGACTGGGTACTTTACGAGCCGTCCAACTTTCAAGCGATATGTTCGAGT
ACACAGCGGATACTACTTGGCTGCACGTCAGATAGAGTTTTTGGTGGGCGGTAGGAGCTC
CTTGGGATTGTTCACTTCCAGCTTGGAAGATGCGATGGGGATTGCCCAGCATCACGATGC
AGTCTCAGGTACTGCGAAACAGCACACGACTGATGACTACGCGAAACGGCTTGCGCTGGG
AGCAGCAAAGGTTGAAAAAGGTGTAAACACCGCTCTGGCTTGTCTGACCAGCTCCAACGG
GACATGTGGATCCTCTGTTGTAAAATTTAGTCAGTGTTCACTTCTCAATATAAGCTACTG
CCCTTCGACCGAGGAAGCAATTTCATCAACAAAGCGTTTAGTTGTAGTTGTTTACAATCC
TCTTGGATGGGAACGTAGTGACTTCATAAGAGTTCCTGTCAATGATCAAAACCTAGTTGT
AAAAGGCTCTGATGGAAATATTGTTGAGTCACAGCTAGTTGAGGTTGATAATGTGACGAG
AAATTTAAGAAAGTTTTATGTGAAGGCTTATCTTGGAATCACAACACACAAGGCCCCTAA
GTATTGGCTACTATTTCAAGCTTCTGTACCACCAATGGGCTGGAATTCCTACTTCATTTC
AAAATCAACTGGAGCAGGATACAACAGTACTGAGCATGTCTCGGACGTGGTTTCCCCAAG
TAACAGCACGATTGAAGTTGGACCAGGACATCTAAAGATGTCCTTCTCAAAAGCATCTGG
ACAACTCAATAGGATATTCAATTCCATCTCAGGAGTGGATTTACCAGTTCAACAAAGCTT
TCTTTGGTACAGATCAAGTGAGGGTGATGCCTCAGACTCACAGGCATCTGGAGCATATAT
ATTTCGACCAGATGGTAATACACCGACTACGGTTTCATCCTCGGTGCCACTGAAAGTTAT
CCGTGGACCACTGGTTGACGAAGTGCATCAGCAATTCAGCTCATGGATTTATCAGATAAC
ACGACTCTACAAAAACAAGGAGCATGCTGAAGTTGAATACACGATTGGGCCGATCCCTGT
CGATGATGATGTAGGGAAGGAGGTCATCACACGGCTGACAGCAAATATGGTCACAAACAG
TACGTTTTATACAGACTCCAATGGAAGGGATTTCCTCAAAAGGGTGAGAAACTACAGGGA
GGACTGGAATCTTCAAGTAACTCAACCAGTTGCAGGAAATTACTATCCGGTGAACCTAGG
AGTGTATGTAGCAGATGAAAAATATGAGCTATCTGTGCTTGTGGACCGTGCTGTCGGAGC
ATCAAGCATTCAGGATGGTCAGCTAGAGATTATGCTACACAGGCGTTTACTTAAGGATGA
TGGCAGGGGTGTCGGAGAGCCACTTGACGAGGTGGTTTGCGTGGATCAAGATTGCCAAGG
GCTTACGGCCAGGGGCAATTACTACGTCAATGTCGAGAAGCTAGGGCATGGAGCTCACTG
GCGACGTACATATGGCCAGCAAGTCTACTCACCCTTTCTCCTTGCTTTCACTCATGAGGA
TGAGACCAGCTCGAAATCCTACAGCGTGGCCAAAGCTGGTATGATGAATGCCAACTACAG
CCTTCCTGATAATGTCGCCATTGTTACTTTGCAGAATCTAGATGATGGTACCACACTACT
CCGCTTGGCCCATCTCTTTCAAGCTGCTGAGGACCCGAGATATTCCAAGGTGGCAAAGGT
TGATCTGAAAAAGGTGTTCGGAAAGAGAACTATCAAGGAATTGACGGAGACTAGCCTCTC
CGCGAACCAAAAGAAGTCAGACATGAAGAAGCTCAGCTGGAGGGTCATTGGGAACACTGA
AACTGGTCCTGCCGCAGTAAAAGGTGGCCCAGTTGACAGTAGGGCTCTAGTCGTTGAACT
AGGACCCATGGAGATACGCACCTTCTTGCTGAAATTTTAGTGGCAGTTGTTCTTTTGTTT
GTAAACAAACAATAGTCCATAGAGTAATTTCTACCTTTTCATTAACGTGCCCAAATCTTA
GTTCAAATAGGATCAAATA