Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d030250_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:116773992:116777183:1 gene:Zm00001d030250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transparent testa 12 protein
Sequence	ATGACACCGAGTCCAAGCAGCAGGCTCGAGCATGAGCTGGAGAAGCCCCCACATCCGCAT GGGCTGGATGCCCATTTCATGAGGAGGCTTGTGAGCCGGAGCTGGGAGGAATCCAGGCTG CTATGGCGCCTTGCCTTCCCGGCGCTCCTGACGGAGGTGTTTCAGTTCTCCATCGGTTTC GTCACCACCGCCTTCGTTGGGCACCTCGGAGAGGTGGAGCTCGCGGCTGTCAGCGTCGTG GAGAACATCTTGGATTCCTCTGCCTATGGGGTCCTGTTTGGCATGGGCAGCGCGCTGGAC ACGCTGAGCGGGCAGGCCGTCGGCGCCGGGCAGCTGGACAGGCTGGGCACCTACACGCAG CAGTCGTGGATCATCTGCGGCGCCACCGCGCTGGCGCTGGCGCCGGCGTACGCCTTCGCC CCGCGGCTCCTGCACTCGTTCCTCCACCAGCCCGACCACGTGTCGCGCGCCGCCGGGCCG TACGCCCGCTGGGCGATCCCGAGGCTGTTCGCGCACGCCGTGAACATACCGCTCCTCATG TTCTTCCAGGCCCAGAGCAGGATCTGGGCCGTGGCGGCCATCTCCGGCGCGGTCCTCGGC GTGCACGCCGCGCTCACCTACGTCGCCGTCACGAGGCTCGGGTACGGCATGCCCGGGGCC GCCGTCGCCGGGGACATCTCCCACTGGCTCGTCGTCGCCGCGCAGTTCGCCTACATGACC GGCGGCCGCTTCCCCGACGCGTGGAAGGGCTTCACCGTGCGTGCGTTCGACAACCTCGGC GCCTTCGTCAAGCTGTCGCTCGGGTCCGCCGTCATGATCTGCTTGGAGTTTTGGTACTAC ACCACGCTTCTCGTCCTCGTGGGTCTCCTCAAACATGGCAAACTCCAAATCGACATCATG TCAGTCTGCCTCAACTTCGAGTTCTTGACTGTAATGGTTGCGCTGGGCTTCAGCACAGCA ATCGGGATTAGAGTGTCCAACGAGCTGGGTGCAAACAGGCCCAAGGAGGCAAAGTTTGCA GTGCTTGTGGCAGTATCGACATCCATGTTCATGGGAGCAGTCTTTATGTGCGTCGTCCTC ATCTGGAGGACGAGCCTGCCAAAGCTCTTCAGCGACAGCGAGGAGGTGAAACGTGGAGCT TCCAAGCTGGGGCATCTCCTCGCTCTCACCGTATGCGTCAGCAGCATCTGGCCTGTGCTA TCAGGCGTGGCCGTAGGAGCTGGGTGGCAAGTGCGTGTGGCGTTCATAAACGTCGGTTGC TACTACCTAGTGGGCATTCCGATGGGTATCCTGCTTGGGTTCAAGCTAAAACACGGCACA ATGGGCATATGGATGGGCATGTTGACAGGCACGTTTCTCCAAATGTCAATACTTCTCGCC ACTATCTTCACAACAAAGTGGGATAAACAGGCCGCACTGGCAGAAGTGAGAATGGCGGAG TGGGGAGGAAAGAACGAGAACCTAACACTGACGGAAACAACACATACAGATGATCTGATG GCTCCTGTGCAAGAGAAAATGTTGGCGAATGACAGCCAGAAGAATGTAGAATTAGTGCGC ATAGATTGA

Peptide Sequence

PEP ID	Zm00001d030250_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:116773992:116777183:1 gene:Zm00001d030250 transcript:Zm00001d030250_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transparent testa 12 protein
Sequence	MTPSPSSRLEHELEKPPHPHGLDAHFMRRLVSRSWEESRLLWRLAFPALLTEVFQFSIGF VTTAFVGHLGEVELAAVSVVENILDSSAYGVLFGMGSALDTLSGQAVGAGQLDRLGTYTQ QSWIICGATALALAPAYAFAPRLLHSFLHQPDHVSRAAGPYARWAIPRLFAHAVNIPLLM FFQAQSRIWAVAAISGAVLGVHAALTYVAVTRLGYGMPGAAVAGDISHWLVVAAQFAYMT GGRFPDAWKGFTVRAFDNLGAFVKLSLGSAVMICLEFWYYTTLLVLVGLLKHGKLQIDIM SVCLNFEFLTVMVALGFSTAIGIRVSNELGANRPKEAKFAVLVAVSTSMFMGAVFMCVVL IWRTSLPKLFSDSEEVKRGASKLGHLLALTVCVSSIWPVLSGVAVGAGWQVRVAFINVGC YYLVGIPMGILLGFKLKHGTMGIWMGMLTGTFLQMSILLATIFTTKWDKQAALAEVRMAE WGGKNENLTLTETTHTDDLMAPVQEKMLANDSQKNVELVRID

Transcript Sequence

Transcript ID	Zm00001d030250_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:116773992:116777183:1 gene:Zm00001d030250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transparent testa 12 protein
Sequence	CTTTCGCGGATTCTGTAGTTTTCCCAGCTAGAGATTAGCAGAGCGGCATGAATAACTCAA ACACAGGTGTTGCAGTTTCCGTCATCGAAATTAAAGGATATACATACATATCTCTTTGTT CCTGCAGCAAGCTGCAAAGAGAACGCTTGTTGGTAGAACAAAGTATATGCCCCCATGACA CCGAGTCCAAGCAGCAGGCTCGAGCATGAGCTGGAGAAGCCCCCACATCCGCATGGGCTG GATGCCCATTTCATGAGGAGGCTTGTGAGCCGGAGCTGGGAGGAATCCAGGCTGCTATGG CGCCTTGCCTTCCCGGCGCTCCTGACGGAGGTGTTTCAGTTCTCCATCGGTTTCGTCACC ACCGCCTTCGTTGGGCACCTCGGAGAGGTGGAGCTCGCGGCTGTCAGCGTCGTGGAGAAC ATCTTGGATTCCTCTGCCTATGGGGTCCTGTTTGGCATGGGCAGCGCGCTGGACACGCTG AGCGGGCAGGCCGTCGGCGCCGGGCAGCTGGACAGGCTGGGCACCTACACGCAGCAGTCG TGGATCATCTGCGGCGCCACCGCGCTGGCGCTGGCGCCGGCGTACGCCTTCGCCCCGCGG CTCCTGCACTCGTTCCTCCACCAGCCCGACCACGTGTCGCGCGCCGCCGGGCCGTACGCC CGCTGGGCGATCCCGAGGCTGTTCGCGCACGCCGTGAACATACCGCTCCTCATGTTCTTC CAGGCCCAGAGCAGGATCTGGGCCGTGGCGGCCATCTCCGGCGCGGTCCTCGGCGTGCAC GCCGCGCTCACCTACGTCGCCGTCACGAGGCTCGGGTACGGCATGCCCGGGGCCGCCGTC GCCGGGGACATCTCCCACTGGCTCGTCGTCGCCGCGCAGTTCGCCTACATGACCGGCGGC CGCTTCCCCGACGCGTGGAAGGGCTTCACCGTGCGTGCGTTCGACAACCTCGGCGCCTTC GTCAAGCTGTCGCTCGGGTCCGCCGTCATGATCTGCTTGGAGTTTTGGTACTACACCACG CTTCTCGTCCTCGTGGGTCTCCTCAAACATGGCAAACTCCAAATCGACATCATGTCAGTC TGCCTCAACTTCGAGTTCTTGACTGTAATGGTTGCGCTGGGCTTCAGCACAGCAATCGGG ATTAGAGTGTCCAACGAGCTGGGTGCAAACAGGCCCAAGGAGGCAAAGTTTGCAGTGCTT GTGGCAGTATCGACATCCATGTTCATGGGAGCAGTCTTTATGTGCGTCGTCCTCATCTGG AGGACGAGCCTGCCAAAGCTCTTCAGCGACAGCGAGGAGGTGAAACGTGGAGCTTCCAAG CTGGGGCATCTCCTCGCTCTCACCGTATGCGTCAGCAGCATCTGGCCTGTGCTATCAGGC GTGGCCGTAGGAGCTGGGTGGCAAGTGCGTGTGGCGTTCATAAACGTCGGTTGCTACTAC CTAGTGGGCATTCCGATGGGTATCCTGCTTGGGTTCAAGCTAAAACACGGCACAATGGGC ATATGGATGGGCATGTTGACAGGCACGTTTCTCCAAATGTCAATACTTCTCGCCACTATC TTCACAACAAAGTGGGATAAACAGGCCGCACTGGCAGAAGTGAGAATGGCGGAGTGGGGA GGAAAGAACGAGAACCTAACACTGACGGAAACAACACATACAGATGATCTGATGGCTCCT GTGCAAGAGAAAATGTTGGCGAATGACAGCCAGAAGAATGTAGAATTAGTGCGCATAGAT TGATCACAGAGTATATTCATTTCAGCTCGAGACAGTATTTCATTGTTTACTAGGATGATA GTATGAATCTATTTTTTTTATAAATAATCTCTCCGTTCCAAACTA