Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030230_T026
CDS Infomation

cds chromosome:B73_RefGen_v4:1:114673284:114679743:-1 gene:Zm00001d030230 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kinesin-like protein KIN-5D
Sequence

ATGGAGGCTTCCACCCCCACCGCTCGCCGAGGTGGAGCCCCCGCCGACTACGCCGCCATG
TCCCTTTCTCCCTCCCCCTCCTTCTCCCACACGCCGAGGAGCGGCGCCTCGTCCTCCGCC
CACAAGCCCCCCACCACAAGCAGGCACCGGGATCGGGGGCCCCTCCTCTTCAACGGCAAC
AGTAACAGTAACAGCAGCATCGCTGCCCAGCAGGCCGCACAGCTGCAGCAAACCTCCACC
ACCACCTCCTCCAAGGGGTCCTCCGGATCCGGAGGCGTTAACATCCAGGTCCTCCTCCGA
TGCAGGCCATTGAGCGATGAGGAACGCCGCGTCGGCACTCCCGTGGTGGTCACTTGCAAT
GACCAGAGACGCGAGGTCTCCGTTGCCCAGAACATCGCTAACAAGCAAATTGATCGCACC
TTTGCATTCGACAAGGTGCTAGGACCAAAGTCTCAACAGCAGGACGTCTTCAACCATGCT
GTTGTGCCACTTGTCAGCGAGGTTTTGGACGGTTATAATTGCACAATATTTGCATATGGC
CAAACTGGAACTGGCAAAACATACACAATGGAAGGAGGAGGGGGCAAAGCACTGAATGCT
GACCTCCCGACTGATGCCGGTGTCATTCCAAGGGCTGTTAAGTGCATATTTGACATCCTC
GAGGCACAGAGTGCAGAGTACAGCATGAAGGTTTCTTTTCTTGAGCTGTACAATGAGGAG
CTCACAGATCTTCTAGCCGCAGAGGAATCGAAATTCTCCGATGACAAGTCCAAGAAGCCT
TTGGCACTCATGGAGGATGGCAAGGGTGGAGTCTTTGTTAGAGGGCTCGAGGAAGAGCTA
GTTTCTTCAGCTGCCGAGATCTACAGGATACTGGAGAGAGGCTCTGCAAAGAGAAAAACT
GCTGAAACTCTTCTCAACAAGCAAAGCAGTCGCTCACACTCTATTTTCTCTATCACCATC
CATATTAAGGAATGCACACCTGAGGGTGAGGAAATGATCAAGTGCGGAAAGCTTAATCTC
GTTGACCTTGCTGGCTCTGAAAACATATCTCGGTCCGGTGCTAGAGACGGGCGAGCTCGC
GAAGCAGGAGAAATTAACAAGAGTCTGCTTACACTTGGGCGTGTCATTAATACTCTTGTC
GAGCACTCTGGACACATACCATACAGGGATAGCAAGTTAACAAGATTGTTAAGAGATTCT
TTGGGAGGGAAGACAAAGACTTGCATTATAGCGACCATTTCACCTTCAGTACACTGCCTT
GAGGAGACGCTAAGCACCCTGGATTATGCGCATCGTGCAAAGCACATCAAGAATAAGCCA
GAGGTCAATCAGAAGATGATGAAATCTGCGCTCATCAAAGATTTGTATTTTCAAATGGAC
CGTCTCAAGCAAGAACTATATGCTGCAAGGGAGAAAAACGGTGTTTACATTCCGAGGGAA
CAATACATAGCAGATGAATCTGAAAAGAAGGCTATGTCAGAGAAACTGGATCGTTTGGAG
CTTGTTTTGGAATCAAAAGATAAGCAATTGGAAGAGCTTCATGGACTCTATGAATCTCAG
AAAGTACTGAGTGCAGATCTAAGTGATCAACTTCAGACATTACAGAAAAGAATGAAGGAA
ACAGAGTGCACCCTAGCGGATCTTGAAACGAGATACATGAAGGCAAATGATACTATTAAG
GAGAAGCAATATTTGATAGAAAATCTTCTTAAATCAGAAAAAGTTCTTGTTGGTGAAGCA
CAAACACTCCGATCAGAGCTGGAGAATACAGCAGGGGATCTACATGGGCTATTTTCAAAA
TTAGAAAGGAAGGAAAAGATCGAAGACAAAAATGGAAGTATAATTCAATATTTCCATTCC
CAGCTGATCCAGGAAATGAATGTATTGCATAGAACAGTCTCAACCTCGGTCTCTCAACAG
GAGAGACAACTAAAAGCACTTGAAGAAGAGATGCAGTCTTTTGTCACCTCAAAGGGCAAG
GTTGCCGGAGGACTTCAAGAGCATGTAAGAAAGCTCAAAGAGAGCTTTAATTCTAGGATA
GCAGAATTGCATGGTTTTGCAAATGAACTCAAGCATAAATCTATGTTGAGCTTTGAAAAC
CTTAATTCGCAAGTTACCACACACACATCTAGCCTTGAGGATTGCATGAAGGACCTATTG
GTTGATGCCGATGAACTACTCATTGCACTACAAAATGGGCTTTCTCAGCATGAAGTGAAC
TTTGCTACGTTTATTGAGCAACAGCATGAGGGGCTCTCTAGAAATTTAGAGGGAACAAAG
TTTGTTTCGGCAACTACAATGAACTTCTTCAGAACTATAGATTCACATGCATTGGGACTC
CTAAAGATTTTGGAAGAATCAAAGATGGAACATCAAAAGCAACTCTTCCAGCTTCAGAAG
AAGTTTGAGGCCGTTGTTGCTGACGAAGAGAAGTACTTGATGGAGAAGGTTGCAGGGTTG
TTTGCAGAATCAAACGCTCGAAAGAAAAATATGGTTCAAGATGACATATGCAGCCTCAAT
AGGACTGTTTCTGAGAGTTCGAACAATTTACAAACCGAAACTACCAAGCTGCATGATTTT
ACATCTTCTATGAAAGAGCAATGGGAAGGCTACATGAAGAAAACTGAAGAGGCATTC

Peptide Sequence

PEP ID

Zm00001d030230_P026
PEP Infomation

pep chromosome:B73_RefGen_v4:1:114673284:114679743:-1 gene:Zm00001d030230 transcript:Zm00001d030230_T026 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kinesin-like protein KIN-5D
Sequence

MEASTPTARRGGAPADYAAMSLSPSPSFSHTPRSGASSSAHKPPTTSRHRDRGPLLFNGN
SNSNSSIAAQQAAQLQQTSTTTSSKGSSGSGGVNIQVLLRCRPLSDEERRVGTPVVVTCN
DQRREVSVAQNIANKQIDRTFAFDKVLGPKSQQQDVFNHAVVPLVSEVLDGYNCTIFAYG
QTGTGKTYTMEGGGGKALNADLPTDAGVIPRAVKCIFDILEAQSAEYSMKVSFLELYNEE
LTDLLAAEESKFSDDKSKKPLALMEDGKGGVFVRGLEEELVSSAAEIYRILERGSAKRKT
AETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGARDGRAR
EAGEINKSLLTLGRVINTLVEHSGHIPYRDSKLTRLLRDSLGGKTKTCIIATISPSVHCL
EETLSTLDYAHRAKHIKNKPEVNQKMMKSALIKDLYFQMDRLKQELYAAREKNGVYIPRE
QYIADESEKKAMSEKLDRLELVLESKDKQLEELHGLYESQKVLSADLSDQLQTLQKRMKE
TECTLADLETRYMKANDTIKEKQYLIENLLKSEKVLVGEAQTLRSELENTAGDLHGLFSK
LERKEKIEDKNGSIIQYFHSQLIQEMNVLHRTVSTSVSQQERQLKALEEEMQSFVTSKGK
VAGGLQEHVRKLKESFNSRIAELHGFANELKHKSMLSFENLNSQVTTHTSSLEDCMKDLL
VDADELLIALQNGLSQHEVNFATFIEQQHEGLSRNLEGTKFVSATTMNFFRTIDSHALGL
LKILEESKMEHQKQLFQLQKKFEAVVADEEKYLMEKVAGLFAESNARKKNMVQDDICSLN
RTVSESSNNLQTETTKLHDFTSSMKEQWEGYMKKTEEAF

Transcript Sequence

Transcript ID

Zm00001d030230_T026
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:114673284:114679743:-1 gene:Zm00001d030230 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kinesin-like protein KIN-5D
Sequence

ACCGATTCAAAATCAGTCGACCGATCCCCATTTCCCCTCCTCATCTGCGTTTCATTTCAT
TCATCATCATCATCCATGGAGGCTTCCACCCCCACCGCTCGCCGAGGTGGAGCCCCCGCC
GACTACGCCGCCATGTCCCTTTCTCCCTCCCCCTCCTTCTCCCACACGCCGAGGAGCGGC
GCCTCGTCCTCCGCCCACAAGCCCCCCACCACAAGCAGGCACCGGGATCGGGGGCCCCTC
CTCTTCAACGGCAACAGTAACAGTAACAGCAGCATCGCTGCCCAGCAGGCCGCACAGCTG
CAGCAAACCTCCACCACCACCTCCTCCAAGGGGTCCTCCGGATCCGGAGGCGTTAACATC
CAGGTCCTCCTCCGATGCAGGCCATTGAGCGATGAGGAACGCCGCGTCGGCACTCCCGTG
GTGGTCACTTGCAATGACCAGAGACGCGAGGTCTCCGTTGCCCAGAACATCGCTAACAAG
CAAATTGATCGCACCTTTGCATTCGACAAGGTGCTAGGACCAAAGTCTCAACAGCAGGAC
GTCTTCAACCATGCTGTTGTGCCACTTGTCAGCGAGGTTTTGGACGGTTATAATTGCACA
ATATTTGCATATGGCCAAACTGGAACTGGCAAAACATACACAATGGAAGGAGGAGGGGGC
AAAGCACTGAATGCTGACCTCCCGACTGATGCCGGTGTCATTCCAAGGGCTGTTAAGTGC
ATATTTGACATCCTCGAGGCACAGAGTGCAGAGTACAGCATGAAGGTTTCTTTTCTTGAG
CTGTACAATGAGGAGCTCACAGATCTTCTAGCCGCAGAGGAATCGAAATTCTCCGATGAC
AAGTCCAAGAAGCCTTTGGCACTCATGGAGGATGGCAAGGGTGGAGTCTTTGTTAGAGGG
CTCGAGGAAGAGCTAGTTTCTTCAGCTGCCGAGATCTACAGGATACTGGAGAGAGGCTCT
GCAAAGAGAAAAACTGCTGAAACTCTTCTCAACAAGCAAAGCAGTCGCTCACACTCTATT
TTCTCTATCACCATCCATATTAAGGAATGCACACCTGAGGGTGAGGAAATGATCAAGTGC
GGAAAGCTTAATCTCGTTGACCTTGCTGGCTCTGAAAACATATCTCGGTCCGGTGCTAGA
GACGGGCGAGCTCGCGAAGCAGGAGAAATTAACAAGAGTCTGCTTACACTTGGGCGTGTC
ATTAATACTCTTGTCGAGCACTCTGGACACATACCATACAGGGATAGCAAGTTAACAAGA
TTGTTAAGAGATTCTTTGGGAGGGAAGACAAAGACTTGCATTATAGCGACCATTTCACCT
TCAGTACACTGCCTTGAGGAGACGCTAAGCACCCTGGATTATGCGCATCGTGCAAAGCAC
ATCAAGAATAAGCCAGAGGTCAATCAGAAGATGATGAAATCTGCGCTCATCAAAGATTTG
TATTTTCAAATGGACCGTCTCAAGCAAGAACTATATGCTGCAAGGGAGAAAAACGGTGTT
TACATTCCGAGGGAACAATACATAGCAGATGAATCTGAAAAGAAGGCTATGTCAGAGAAA
CTGGATCGTTTGGAGCTTGTTTTGGAATCAAAAGATAAGCAATTGGAAGAGCTTCATGGA
CTCTATGAATCTCAGAAAGTACTGAGTGCAGATCTAAGTGATCAACTTCAGACATTACAG
AAAAGAATGAAGGAAACAGAGTGCACCCTAGCGGATCTTGAAACGAGATACATGAAGGCA
AATGATACTATTAAGGAGAAGCAATATTTGATAGAAAATCTTCTTAAATCAGAAAAAGTT
CTTGTTGGTGAAGCACAAACACTCCGATCAGAGCTGGAGAATACAGCAGGGGATCTACAT
GGGCTATTTTCAAAATTAGAAAGGAAGGAAAAGATCGAAGACAAAAATGGAAGTATAATT
CAATATTTCCATTCCCAGCTGATCCAGGAAATGAATGTATTGCATAGAACAGTCTCAACC
TCGGTCTCTCAACAGGAGAGACAACTAAAAGCACTTGAAGAAGAGATGCAGTCTTTTGTC
ACCTCAAAGGGCAAGGTTGCCGGAGGACTTCAAGAGCATGTAAGAAAGCTCAAAGAGAGC
TTTAATTCTAGGATAGCAGAATTGCATGGTTTTGCAAATGAACTCAAGCATAAATCTATG
TTGAGCTTTGAAAACCTTAATTCGCAAGTTACCACACACACATCTAGCCTTGAGGATTGC
ATGAAGGACCTATTGGTTGATGCCGATGAACTACTCATTGCACTACAAAATGGGCTTTCT
CAGCATGAAGTGAACTTTGCTACGTTTATTGAGCAACAGCATGAGGGGCTCTCTAGAAAT
TTAGAGGGAACAAAGTTTGTTTCGGCAACTACAATGAACTTCTTCAGAACTATAGATTCA
CATGCATTGGGACTCCTAAAGATTTTGGAAGAATCAAAGATGGAACATCAAAAGCAACTC
TTCCAGCTTCAGAAGAAGTTTGAGGCCGTTGTTGCTGACGAAGAGAAGTACTTGATGGAG
AAGGTTGCAGGGTTGTTTGCAGAATCAAACGCTCGAAAGAAAAATATGGTTCAAGATGAC
ATATGCAGCCTCAATAGGACTGTTTCTGAGAGTTCGAACAATTTACAAACCGAAACTACC
AAGCTGCATGATTTTACATCTTCTATGAAAGAGCAATGGGAAGGCTACATGAAGAAAACT
GAAGAGGCATTCC