Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030213_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:113434606:113438057:1 gene:Zm00001d030213 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase

Sequence

ATGGCGGGCGATGCGCTCATCGTCATCGTCACTAGCTTCCTCCTCGCGCTGCCGTCAGCG
ACGGCAATAGGCAAGGTCTGCGGCAACGCCGGCAACTACACGGCCAACGGCAGGTACCGG
TCCAACCTCGACTCCCTCGCCGCGGCCCTCCCAGCCAACACGTCCTCGTCCCCTCAGCTC
TTCGCCAACGCCACCGCCGGCCAGGCCCCCGACGCCGTGTACGCGCTCGCGCTCTGCCGC
GGCGACCTGACCGGCAACCTCACCGGGTGCAGCGCCTGCGTGAACGGCTCGTTGCAGTAC
GCGCGGAGGGCGTGCCCCTACGCCAAGGCCGCCAGCGTCTACGACGACAACTGCCTCATC
GGCTACTCCAGCGCCAACATCCTCGTCCCGGCCTATAACGCCACCCGGGACACGAGCACG
CTCTTCGACTACTGGAACAGCATGACCATCGCCGGCAACGGCACACTGGTGGCCGCCCAC
GTCGACGACCTGCTGACGCAGACTGCCCAGCAGGCTGCCTCCAGCCCGAGGAGGTTCGTC
ACGGCCTACATGGACGGCTCCAGCAACGCCGTCATCCCGACGCTCTACTCCCTGGCGCAG
TGCACGCCCGACCTGTCAGCCGGCGACTGCCTGGCCTGCCTCCAGCGGATCCTCGGCTTG
CTCAACGCCACGACGTCGGTGAGCCTTGGAGGGCGGGTCCTCCTGCTGCGGTGCAACTTC
AGGTTCGAGAATAACATGTTCTTCGACGGCGCACAGATGACGCAGATCAGGCCGTCGTCC
GGCGCTCCGGCGCCACCACCACCGTCTCCGACGACAAATAAAGGATCTGGGGTGAAGCCT
TGGGTAATTGCGGTGTCTGTAGCACCTCCTGTGGCGGTAGTAGCATTCTGCTTCATCCTT
TACAACCGTAGGCAAAGGAGAAGGTTCAGAAGAGGTAGATCTAAACTACGACAAAAGCAT
CCTCGCAACAACTTGAAAGGAGACGAACTAGATTGGGAAATGGAAACAGAGCTCTCAGAG
TTTTCTGTTTTTGACTTCCATCAGATATTGGAGGCTACAGATAACTTCTCTGAAGAAAAT
AAACTTGGGGAAGGTGGGTTTGGCCCCGTTTATAAGGGTCAGTTTCCTGATGGAACTGAG
ATAGCTGTTAAGAGACTTGCTTCACATTCAGGGCAAGGTTTTGTAGAGTTCAAGAATGAA
GTACAACTCATAGCGAAACTCCAACACACAAATTTGGTTAGGCTCTTGGGATGTTGCTCT
CAGGGAGAGGAGAAAATTTTGGTCTATGAATACTTGCCAAACAAAAGCTTGGACTTCTTT
ATCTTTGATGAAAACAGGAAATCGTTACTGGATTGGAAAAAGCGTCTAGCGATAATTGAA
GGAATAGCAGAAGGACTTCTCTACCTGCATAAGCACTCCCGTTTGCGTGTCATTCATCGA
GATCTTAAACCAAGTAACATTCTCCTGGACAGCGAAATGAATCCTAAAATTTCAGACTTT
GGGTTAGCAAAAATATTTAGCTCAAATAACATCGAAGGAAGCACTACAAGGAGAGTGGTT
GGTACATATGGTTATATGGCTCCCGAGTATGCCTCTGAGGGCATCTTCTCTATCAAATCT
GACGTATTCAGCTTTGGCGTTCTCATTCTTGAGATCCTTAGCGGAAAAAGGAATTCCGGC
AACCACGATTATGGAGATTTCATCAATATTCTCGGATATGCATGGCAATTGTATGAAGAG
GCAAGATGGATGGATCTCGTTGATGCCTCATTGGTACCAATGGATCACTCATCTGAAATC
ATGAGGTGCATGAACATTGCATTGCTGTGTGTACAAGAGAATGCCGCTGATCGACCAGCC
ATGTTGGATGTTGTTGCGATGCTAAGCAACAAGGCTAAGACCCTGGCTCAGCCGAACCAC
CCAGCGTATTTCAATGTACGGGTAGGAAACGAAGAGGAGTCCACTGCTGCTACGGCGTCA
GGCAGTATCAATGAGATGACCGTATCTGTCACAACTGGTAGATAA

Peptide Sequence

PEP ID

Zm00001d030213_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:113434606:113438057:1 gene:Zm00001d030213 transcript:Zm00001d030213_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase

Sequence

MAGDALIVIVTSFLLALPSATAIGKVCGNAGNYTANGRYRSNLDSLAAALPANTSSSPQL
FANATAGQAPDAVYALALCRGDLTGNLTGCSACVNGSLQYARRACPYAKAASVYDDNCLI
GYSSANILVPAYNATRDTSTLFDYWNSMTIAGNGTLVAAHVDDLLTQTAQQAASSPRRFV
TAYMDGSSNAVIPTLYSLAQCTPDLSAGDCLACLQRILGLLNATTSVSLGGRVLLLRCNF
RFENNMFFDGAQMTQIRPSSGAPAPPPPSPTTNKGSGVKPWVIAVSVAPPVAVVAFCFIL
YNRRQRRRFRRGRSKLRQKHPRNNLKGDELDWEMETELSEFSVFDFHQILEATDNFSEEN
KLGEGGFGPVYKGQFPDGTEIAVKRLASHSGQGFVEFKNEVQLIAKLQHTNLVRLLGCCS
QGEEKILVYEYLPNKSLDFFIFDENRKSLLDWKKRLAIIEGIAEGLLYLHKHSRLRVIHR
DLKPSNILLDSEMNPKISDFGLAKIFSSNNIEGSTTRRVVGTYGYMAPEYASEGIFSIKS
DVFSFGVLILEILSGKRNSGNHDYGDFINILGYAWQLYEEARWMDLVDASLVPMDHSSEI
MRCMNIALLCVQENAADRPAMLDVVAMLSNKAKTLAQPNHPAYFNVRVGNEEESTAATAS
GSINEMTVSVTTGR

Transcript Sequence

Transcript ID

Zm00001d030213_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:113434606:113438057:1 gene:Zm00001d030213 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase

Sequence

AATCTAGCCTGCCTGTCCTTAGCGTAGTCATGCCATGGCGGGCGATGCGCTCATCGTCAT
CGTCACTAGCTTCCTCCTCGCGCTGCCGTCAGCGACGGCAATAGGCAAGGTCTGCGGCAA
CGCCGGCAACTACACGGCCAACGGCAGGTACCGGTCCAACCTCGACTCCCTCGCCGCGGC
CCTCCCAGCCAACACGTCCTCGTCCCCTCAGCTCTTCGCCAACGCCACCGCCGGCCAGGC
CCCCGACGCCGTGTACGCGCTCGCGCTCTGCCGCGGCGACCTGACCGGCAACCTCACCGG
GTGCAGCGCCTGCGTGAACGGCTCGTTGCAGTACGCGCGGAGGGCGTGCCCCTACGCCAA
GGCCGCCAGCGTCTACGACGACAACTGCCTCATCGGCTACTCCAGCGCCAACATCCTCGT
CCCGGCCTATAACGCCACCCGGGACACGAGCACGCTCTTCGACTACTGGAACAGCATGAC
CATCGCCGGCAACGGCACACTGGTGGCCGCCCACGTCGACGACCTGCTGACGCAGACTGC
CCAGCAGGCTGCCTCCAGCCCGAGGAGGTTCGTCACGGCCTACATGGACGGCTCCAGCAA
CGCCGTCATCCCGACGCTCTACTCCCTGGCGCAGTGCACGCCCGACCTGTCAGCCGGCGA
CTGCCTGGCCTGCCTCCAGCGGATCCTCGGCTTGCTCAACGCCACGACGTCGGTGAGCCT
TGGAGGGCGGGTCCTCCTGCTGCGGTGCAACTTCAGGTTCGAGAATAACATGTTCTTCGA
CGGCGCACAGATGACGCAGATCAGGCCGTCGTCCGGCGCTCCGGCGCCACCACCACCGTC
TCCGACGACAAATAAAGGATCTGGGGTGAAGCCTTGGGTAATTGCGGTGTCTGTAGCACC
TCCTGTGGCGGTAGTAGCATTCTGCTTCATCCTTTACAACCGTAGGCAAAGGAGAAGGTT
CAGAAGAGGTAGATCTAAACTACGACAAAAGCATCCTCGCAACAACTTGAAAGGAGACGA
ACTAGATTGGGAAATGGAAACAGAGCTCTCAGAGTTTTCTGTTTTTGACTTCCATCAGAT
ATTGGAGGCTACAGATAACTTCTCTGAAGAAAATAAACTTGGGGAAGGTGGGTTTGGCCC
CGTTTATAAGGGTCAGTTTCCTGATGGAACTGAGATAGCTGTTAAGAGACTTGCTTCACA
TTCAGGGCAAGGTTTTGTAGAGTTCAAGAATGAAGTACAACTCATAGCGAAACTCCAACA
CACAAATTTGGTTAGGCTCTTGGGATGTTGCTCTCAGGGAGAGGAGAAAATTTTGGTCTA
TGAATACTTGCCAAACAAAAGCTTGGACTTCTTTATCTTTGATGAAAACAGGAAATCGTT
ACTGGATTGGAAAAAGCGTCTAGCGATAATTGAAGGAATAGCAGAAGGACTTCTCTACCT
GCATAAGCACTCCCGTTTGCGTGTCATTCATCGAGATCTTAAACCAAGTAACATTCTCCT
GGACAGCGAAATGAATCCTAAAATTTCAGACTTTGGGTTAGCAAAAATATTTAGCTCAAA
TAACATCGAAGGAAGCACTACAAGGAGAGTGGTTGGTACATATGGTTATATGGCTCCCGA
GTATGCCTCTGAGGGCATCTTCTCTATCAAATCTGACGTATTCAGCTTTGGCGTTCTCAT
TCTTGAGATCCTTAGCGGAAAAAGGAATTCCGGCAACCACGATTATGGAGATTTCATCAA
TATTCTCGGATATGCATGGCAATTGTATGAAGAGGCAAGATGGATGGATCTCGTTGATGC
CTCATTGGTACCAATGGATCACTCATCTGAAATCATGAGGTGCATGAACATTGCATTGCT
GTGTGTACAAGAGAATGCCGCTGATCGACCAGCCATGTTGGATGTTGTTGCGATGCTAAG
CAACAAGGCTAAGACCCTGGCTCAGCCGAACCACCCAGCGTATTTCAATGTACGGGTAGG
AAACGAAGAGGAGTCCACTGCTGCTACGGCGTCAGGCAGTATCAATGAGATGACCGTATC
TGTCACAACTGGTAGATAATTTTTGTTTGTACAAAGTGGTTACTGTTGAGCTTATATATA
TAATTATCCTTTTGATAATGTGCAATGCAGACATATTTCATTATATGGGGTATATGTTTA
TTTAATTAC