Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d030208_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:113122076:113123932:1 gene:Zm00001d030208 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein PPR1106-17
Sequence	ATGCTACTATGCTGCTGTACTTTTCCCCAACAAATCCAGACCTGTGCTCCGCGCTCGTCG TTTCACCCAAGCTGCTTGCCGCGGAGCTTGCTCAGCTCCGGCGAGCAGGGGAGGAGCAAA AAGAGCAAGCTCCACCGCGTCAGGGCGCATGTTTTCAAGTCCAAGAACCAGTCTTTGCGC TCTCAATCCCACCTGGTTGATAGCCACGGGGGCCCTGCGGATAAAATCCCGAGAAAGGAT TTTCCTTGTTCCGCAGCGCCGTCGCTGCCGGACGCGGAGGCGGTCGCGTTCTGGCTGCGT TTCTGCCGGAGGGAGCTCGACGTCCGGAGAGCGCACGCGGTTGCCCTGCGGTCGCTCGGC AGCCTGGGGGTGTTCGTCTCCAACAATCTGATCAGCGCTTATGTGCGGTTCGACGAGGTT GCTAATGCGAGGAAGGTGTTCGACGAAATGCCCGAGAGGAGTATCGTGTCGTGGACAGCA ATGATGAATGGGTATCAGAAGCTTGGCTGCCACGGTGAGCATGGCCATAGTGACAAAGCT CTTCAGATGTTCCCAACAATGGTGTCTGAGGGATTTCGCCCCAACGAATTTACTGTTTGC AGCGCCCTCAAGGCTTGTGCAGAGGAGAAGGCTCTAAGATTTGGGAAGCAGTTGCATGGT GCTATTGTGAAGAAGCTATACAAATATGATATCCATGTCGGGAGCGCACTTGTCACCATG TATGCCAGATGTGGGGAGGTATTTGATGCTCAGACAGTGTTCGATAAGATGCCAAGAAGA AACACTATTACATGGACTTCAATGATCTCTGGATATGCTCAAAGTGGCTGTGGTGAAGAA GCTGTCTTGTTGTTCCGCAAGATGAAGATGCGCAGAGTATTTGTTAACCACCTTACTATT GTTAGTCTCCTTAGTGCTTGTGGCTCTATGCAGTCAATTTATCATGGAAAAGAACTTCAT GCCCAGATAATAAAGAATTGTATGGAAGAGAATCTCCAGATTGGGAGTACGCTTGTTTGG TTTTACAACAGACGTGGGGAGCATACTTATGCCACAAGAATTCTAGAAGCGATGCCTGAC CGTGATGCTGTCGCATGGACAGCTATGATTTCGGGCTATAACAATCTTGGCCATAATGTT GAAGCGCTTAAATCATTGGATGAAATGTTATGGGATGGTGTGGTACCAAACACTTACACC TATTCCTCAGCTTTGAAAGCTTGTGCCAGATTGGAGGCTCTGCAAGATGGGAGGAGGATC CATGGTGTTGTTAACAAGACCCAAGCTTTCTCAAATGTGTTTGTGGGATGCTCACTGATA GATATGTACATGCGGTGTGGGAAAGTTGATGAAGCTCGAAGAGTCTTCGACGCCATGCCA GAGCACAACTTAGTAACATGGAAAGTAATGATTACAGGATTTACACAAAATGGCCGCAGT GAAGAGGCTTTGAAATACATGTTCCTAATGCAACAAGAAGGTTATGTTGTTGATGAATTT GTGCTTTCGACAGTTTTGTCGTCATGTGGAGATTTTCAGTTGAAATCAGACCGCATCTCG TTCATAGTTCAATAA

Peptide Sequence

PEP ID	Zm00001d030208_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:113122076:113123932:1 gene:Zm00001d030208 transcript:Zm00001d030208_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein PPR1106-17
Sequence	MLLCCCTFPQQIQTCAPRSSFHPSCLPRSLLSSGEQGRSKKSKLHRVRAHVFKSKNQSLR SQSHLVDSHGGPADKIPRKDFPCSAAPSLPDAEAVAFWLRFCRRELDVRRAHAVALRSLG SLGVFVSNNLISAYVRFDEVANARKVFDEMPERSIVSWTAMMNGYQKLGCHGEHGHSDKA LQMFPTMVSEGFRPNEFTVCSALKACAEEKALRFGKQLHGAIVKKLYKYDIHVGSALVTM YARCGEVFDAQTVFDKMPRRNTITWTSMISGYAQSGCGEEAVLLFRKMKMRRVFVNHLTI VSLLSACGSMQSIYHGKELHAQIIKNCMEENLQIGSTLVWFYNRRGEHTYATRILEAMPD RDAVAWTAMISGYNNLGHNVEALKSLDEMLWDGVVPNTYTYSSALKACARLEALQDGRRI HGVVNKTQAFSNVFVGCSLIDMYMRCGKVDEARRVFDAMPEHNLVTWKVMITGFTQNGRS EEALKYMFLMQQEGYVVDEFVLSTVLSSCGDFQLKSDRISFIVQ

Transcript Sequence

Transcript ID	Zm00001d030208_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:113122076:113123932:1 gene:Zm00001d030208 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein PPR1106-17
Sequence	ATGCTACTATGCTGCTGTACTTTTCCCCAACAAATCCAGACCTGTGCTCCGCGCTCGTCG TTTCACCCAAGCTGCTTGCCGCGGAGCTTGCTCAGCTCCGGCGAGCAGGGGAGGAGCAAA AAGAGCAAGCTCCACCGCGTCAGGGCGCATGTTTTCAAGTCCAAGAACCAGTCTTTGCGC TCTCAATCCCACCTGGTTGATAGCCACGGGGGCCCTGCGGATAAAATCCCGAGAAAGGAT TTTCCTTGTTCCGCAGCGCCGTCGCTGCCGGACGCGGAGGCGGTCGCGTTCTGGCTGCGT TTCTGCCGGAGGGAGCTCGACGTCCGGAGAGCGCACGCGGTTGCCCTGCGGTCGCTCGGC AGCCTGGGGGTGTTCGTCTCCAACAATCTGATCAGCGCTTATGTGCGGTTCGACGAGGTT GCTAATGCGAGGAAGGTGTTCGACGAAATGCCCGAGAGGAGTATCGTGTCGTGGACAGCA ATGATGAATGGGTATCAGAAGCTTGGCTGCCACGGTGAGCATGGCCATAGTGACAAAGCT CTTCAGATGTTCCCAACAATGGTGTCTGAGGGATTTCGCCCCAACGAATTTACTGTTTGC AGCGCCCTCAAGGCTTGTGCAGAGGAGAAGGCTCTAAGATTTGGGAAGCAGTTGCATGGT GCTATTGTGAAGAAGCTATACAAATATGATATCCATGTCGGGAGCGCACTTGTCACCATG TATGCCAGATGTGGGGAGGTATTTGATGCTCAGACAGTGTTCGATAAGATGCCAAGAAGA AACACTATTACATGGACTTCAATGATCTCTGGATATGCTCAAAGTGGCTGTGGTGAAGAA GCTGTCTTGTTGTTCCGCAAGATGAAGATGCGCAGAGTATTTGTTAACCACCTTACTATT GTTAGTCTCCTTAGTGCTTGTGGCTCTATGCAGTCAATTTATCATGGAAAAGAACTTCAT GCCCAGATAATAAAGAATTGTATGGAAGAGAATCTCCAGATTGGGAGTACGCTTGTTTGG TTTTACAACAGACGTGGGGAGCATACTTATGCCACAAGAATTCTAGAAGCGATGCCTGAC CGTGATGCTGTCGCATGGACAGCTATGATTTCGGGCTATAACAATCTTGGCCATAATGTT GAAGCGCTTAAATCATTGGATGAAATGTTATGGGATGGTGTGGTACCAAACACTTACACC TATTCCTCAGCTTTGAAAGCTTGTGCCAGATTGGAGGCTCTGCAAGATGGGAGGAGGATC CATGGTGTTGTTAACAAGACCCAAGCTTTCTCAAATGTGTTTGTGGGATGCTCACTGATA GATATGTACATGCGGTGTGGGAAAGTTGATGAAGCTCGAAGAGTCTTCGACGCCATGCCA GAGCACAACTTAGTAACATGGAAAGTAATGATTACAGGATTTACACAAAATGGCCGCAGT GAAGAGGCTTTGAAATACATGTTCCTAATGCAACAAGAAGGTTATGTTGTTGATGAATTT GTGCTTTCGACAGTTTTGTCGTCATGTGGAGATTTTCAGTTGAAATCAGACCGCATCTCG TTCATAGTTCAATAA