Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d030133_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:1:108282910:108288760:-1 gene:Zm00001d030133 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein
Sequence	ATGACATCAGAACGACAGAAAATTCTCAATGACCCAAAAGCTGTTATGCCAGTTTCTTTT GTGACATTTGACTCGAGATGGGGTGCGGCTGTGTGTGCACAGACACAACAGTCAAAGAAC CCAACCCAATGGTTGACTGATTGGGCTCCTGAACCGCGGGATGTTTATTGGCAAAATCTT GCCATCCCATTTTTCTCTCTCAGTATCCGCAGGTTTCTGATGTCTGTCGCTGTCTTTGCT CTAGTGTTTTTCTACATGATCCCCATCGCGTTTGTTCAATCGCTTGCCAATCTCGAGGGT CTTGAAAAAGTTGCTCCTTTTCTGAAGCCAGTAATAGAAGCACATGTGGTAAAATCTTTC CTTCAGGGATTTCTTCCTGGTCTGGCTCTGAAGATTTTTCTCTATATTCTCCCTACTGTC CTGCTAATCATGTCAAAGGTTGAAGGCTATGTCTCTTTATCCTCGCTGGAAAGGAGGACT GCTTCGAAATATTACTACTTCATGCTGGTGAACGTATTTCTTGGAAGCATAATCGCTGGC ACAGCATTTGAACAGCTATATTCGTTTCTCCACCAGCCTCCTACACAAATACCAAGGACC ATTGGGGTAGCTATACCAATGAAAGCCACATTTTTCATGACATACGTAATGGTAGATGGC TGGGCTGGTATTGCTAACGAGATCCTTCGAGTGAAGGCTCTGGTGATATACCATCTGAAG AACATGTTCATCGTGAAGACGGAGAGGGACAGGGATCGGGCGATGGATCCCGGCAGCATA GGACTCGGAGAAAACCTCCCGTCCCTTCAGCTGTATTTCCTCCTCGGCCTCGTGTACGCC GTCGTTACCCCGCTTCTCCTGCCGTTTATAATCGTCTTCTTCGCCTTTGCTTTCCTCGTC TACAGACACCAGATCATCAACGTGTACAATCAGGAGTACGAGAGTGCTGCTGCGTTCTGG CCTCAGGTGCACTCCCGGATAATAGCTAGCCTACTCATCTCTCATGTAACTCTGTTTGGG TTGATGAGCACAAAGGAAGCTGCGTACTCCACCCCTCTGCTCATCTTCCTGCCTCTGCTG ACGATCTGGTTCCACAAATACTGCAAGAGCCGGTTCGAACCAGCTTTCAGAAAGTATCCT CTTGAGGAAGCAATGGCGAAGGACACCATGGAGCACGCATCGGAGCCTAACCTGAACCTG GAATCCTTCCTGGCTAACGCTTACCTGCACCCCATCTTCCGCCTTTTCGAGGAAGCCGGG AAAGAGGAGGAGACGGTGGAGGTGAGGATCGACAAAGCCGAGAAGCAGCAGCATCGCCAT GAGGAGGACGAGGCTCACGCGAGGAGCTCGTCGCAGTACCGGGAGGAGGAGACTCACTTC AGGAGCACGCACGAGACGCATTACCACCACGAGGAGAGCCACGTCAGCAGGAGCACCCAG TATCATGAGGGCATCCACGTGAGGAGCGACACGGACTCGCCGTCGCCGCCACACTTCGTC TACCACTACGACATCCAGCAGTGA

Peptide Sequence

PEP ID	Zm00001d030133_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:1:108282910:108288760:-1 gene:Zm00001d030133 transcript:Zm00001d030133_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein
Sequence	MTSERQKILNDPKAVMPVSFVTFDSRWGAAVCAQTQQSKNPTQWLTDWAPEPRDVYWQNL AIPFFSLSIRRFLMSVAVFALVFFYMIPIAFVQSLANLEGLEKVAPFLKPVIEAHVVKSF LQGFLPGLALKIFLYILPTVLLIMSKVEGYVSLSSLERRTASKYYYFMLVNVFLGSIIAG TAFEQLYSFLHQPPTQIPRTIGVAIPMKATFFMTYVMVDGWAGIANEILRVKALVIYHLK NMFIVKTERDRDRAMDPGSIGLGENLPSLQLYFLLGLVYAVVTPLLLPFIIVFFAFAFLV YRHQIINVYNQEYESAAAFWPQVHSRIIASLLISHVTLFGLMSTKEAAYSTPLLIFLPLL TIWFHKYCKSRFEPAFRKYPLEEAMAKDTMEHASEPNLNLESFLANAYLHPIFRLFEEAG KEEETVEVRIDKAEKQQHRHEEDEAHARSSSQYREEETHFRSTHETHYHHEESHVSRSTQ YHEGIHVRSDTDSPSPPHFVYHYDIQQ

Transcript Sequence

Transcript ID	Zm00001d030133_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:108282910:108288760:-1 gene:Zm00001d030133 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein
Sequence	CCCCTTCCCTTCCGTCTCATCTTCGTTCCCTTCCGGGGTCATCCCTTCCGTCCTCCTCCT ACCAAGTCCCAAGGCCGCGAGACAGACAGACAGACAGACAGAAAGAGAGAGCAGAGCAGA CAATGGCGACGCTCGAGGACCTGGGCGTCTCCGCCTTCATCAACATCCTGGGCGCCTTCG TCTTCCTGCTCCTCTTCGCCGTCCTCCGCATCCAGCCCGTCAACGACCGCGTCTACTTCC CCAAGCTCTACCTCGCGCACAAGCGCCACCAGCACGACCACGCCGCCCGCTCCGCCTTCC GCCGCTTCGTCAACCTCAACCTCTGCACCTACGTCACCTTCCTCAGCTGGGTGCCCGGCG CGCTCCGCATGTCCGAGCCGGACCTCGTCGCCCACGCCGGGCTCGACTCCGCCGTCTACC TTAGAATCTACACGCTCGGCCTCAAGATATTTCTGCCCATTACGACTCTCGCCCTTCTGG TTCTTATCCCAGTCAACGTATCTGGCGGCACATTACTTGATCTAAGAAAGGAAGTTGTTT TCAGTGATATCGATAAGCTTTCCATATCAAATGTTAGCCCTGGATCCAACAGGTGCGGAT CTTACGAACTCTTAATTTTTTTGGCTGTTCCTCATGCTCATATAATGTCCACAACATTTC CATGCCTGCTATGCTTTCAGTTTTGTTTTTGCATGTTGGGACTGCTCAGAGCTATCTGAT CATTGTCGTTGCAATTCGTTTCAGATTCTTTATCCATCTCTTGATGGCATATGTGTTCAC ATTCTGGGTGTGCTTTATGCTGTACAAAGAATACAGCAATGTAGCATTTATGAGGTTGCA TTTCCTGGCTTCCCAGAAGCGCTGTGCCGATCATTTCACAGTAAGTACATTGACAAAGTA TGATGTGATATACTAACCTTATATATGAACCATGCTCCACTGCATTTGTGACGGATATCT ATGAAAAGAGTATTTGAACACAAAACACATGCCCTAGTGTGGATTTGCTGCGCAGAACAT GTACCAAATTTGTGCTACAACTTAATGTATTCACATTTATATCTGAGACCCTTATAGTAT TTCTGTAGCATTTAATGTTTTTTTTTTGCAATTCCAGGTGATTGTTAGAAACATTCCTCG TGTCTCAAGTCATTCAACTTCTGAAACAGTGGATGAGTTCTTCCGAAGAAATCACCCAGA CCACTATCTTGGTCATCAGCCTGTTTACAATGCAAATCGGTATGCTAAACTTGTGAAGCA AAAGGAGAGGCTCCAAAACTGGTTGGATTACTACGAACTGAAGTTCGAAAGGCATCCTGA GAGAAGACCAACAAGACGGGTAACTTTTCCAACATTGATTCTGTTCTCTTACATTTCTGG TGTGCCATGTTCTTCAAATGTATCCATTCTGTATTTTATTTCCAAGAAATGGGAAATGGT TCAGCATGTTGTTTGTTTTATGTGTTTTAGACAGGATGCCTTGGTTTCTGTGGCAGGGAA GTGGATCAAATAGACTACTACCGGGCTAGAATCAGCGAGCTTGAGAGGAGGATGACATCA GAACGACAGAAAATTCTCAATGACCCAAAAGCTGTTATGCCAGTTTCTTTTGTGACATTT GACTCGAGATGGGGTGCGGCTGTGTGTGCACAGACACAACAGTCAAAGAACCCAACCCAA TGGTTGACTGATTGGGCTCCTGAACCGCGGGATGTTTATTGGCAAAATCTTGCCATCCCA TTTTTCTCTCTCAGTATCCGCAGGTTTCTGATGTCTGTCGCTGTCTTTGCTCTAGTGTTT TTCTACATGATCCCCATCGCGTTTGTTCAATCGCTTGCCAATCTCGAGGGTCTTGAAAAA GTTGCTCCTTTTCTGAAGCCAGTAATAGAAGCACATGTGGTAAAATCTTTCCTTCAGGGA TTTCTTCCTGGTCTGGCTCTGAAGATTTTTCTCTATATTCTCCCTACTGTCCTGCTAATC ATGTCAAAGGTTGAAGGCTATGTCTCTTTATCCTCGCTGGAAAGGAGGACTGCTTCGAAA TATTACTACTTCATGCTGGTGAACGTATTTCTTGGAAGCATAATCGCTGGCACAGCATTT GAACAGCTATATTCGTTTCTCCACCAGCCTCCTACACAAATACCAAGGACCATTGGGGTA GCTATACCAATGAAAGCCACATTTTTCATGACATACGTAATGGTAGATGGCTGGGCTGGT ATTGCTAACGAGATCCTTCGAGTGAAGGCTCTGGTGATATACCATCTGAAGAACATGTTC ATCGTGAAGACGGAGAGGGACAGGGATCGGGCGATGGATCCCGGCAGCATAGGACTCGGA GAAAACCTCCCGTCCCTTCAGCTGTATTTCCTCCTCGGCCTCGTGTACGCCGTCGTTACC CCGCTTCTCCTGCCGTTTATAATCGTCTTCTTCGCCTTTGCTTTCCTCGTCTACAGACAC CAGATCATCAACGTGTACAATCAGGAGTACGAGAGTGCTGCTGCGTTCTGGCCTCAGGTG CACTCCCGGATAATAGCTAGCCTACTCATCTCTCATGTAACTCTGTTTGGGTTGATGAGC ACAAAGGAAGCTGCGTACTCCACCCCTCTGCTCATCTTCCTGCCTCTGCTGACGATCTGG TTCCACAAATACTGCAAGAGCCGGTTCGAACCAGCTTTCAGAAAGTATCCTCTTGAGGAA GCAATGGCGAAGGACACCATGGAGCACGCATCGGAGCCTAACCTGAACCTGGAATCCTTC CTGGCTAACGCTTACCTGCACCCCATCTTCCGCCTTTTCGAGGAAGCCGGGAAAGAGGAG GAGACGGTGGAGGTGAGGATCGACAAAGCCGAGAAGCAGCAGCATCGCCATGAGGAGGAC GAGGCTCACGCGAGGAGCTCGTCGCAGTACCGGGAGGAGGAGACTCACTTCAGGAGCACG CACGAGACGCATTACCACCACGAGGAGAGCCACGTCAGCAGGAGCACCCAGTATCATGAG GGCATCCACGTGAGGAGCGACACGGACTCGCCGTCGCCGCCACACTTCGTCTACCACTAC GACATCCAGCAGTGATGATGTCGTCTCTAACTTTGTTTTCCTGGGTGTCTTGTGAATGCT TCTCTTGGCTAACCTGTCCAGCCCCCCCCCCCCCCCCCCCAAGAGGTTTGCTAAAGTCGC TGATGATTGATGAATTGTTGCGTGTACATGCAGGGTAGGGTCTAGTGTTGTAGTGACTGT AAAAGTTCTGGTGTGCCATGGGACCTGAACATTGATTCCATGCAGGAAAAAAAAGAAGTG