Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030127_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:107762967:107765646:-1 gene:Zm00001d030127 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plastidal glycolate/glycerate translocator 1 chloroplastic
Sequence

ATGGCCGCCACCGCCATGATTGGGATTACCAACCTACGTTGCCGCCACGACCCGCTCTCC
TCCCTTCCCCGGGCTACGTCGTCGGCCGCCCGGTCCTGTACGCTGCTTCCTCCTCGATGC
CGCCGCCATTCTTCTTGCTGCTCCCCTTCCTCCTCCGTCTCTCCGTGCCGGGCCCGGGTC
CGACCAACAGCAGCACTGAAGCGCATCCCTGCCGCCGACACCGGCTTCATGGGTCCAGCC
AACAATGAGGCCACCACGCTTAAACGATCATCGTCGGCCGACCTTCGCCGCCGCCTTATC
GTCCCCAGCTCCACCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCC
GCCATTATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATGGACAAG
TTCCTCAAGCAGGCATTCGTCGCCGCGTCCATCAAGTTCCCGAGTGCCCTTTTCGGCATG
TTCTGTGTCTTCTCGGTGCTCGTAGTCTTCGACACATTCGTGCCTCCTCTCGCGAAGGCG
TTCATTGGCTTCTTTGAGCCCGCCACGCTGTTCATCCAGAGGTGGCTGTCCTTGTTCTAC
GTCCCGACACTGGTCGTGCTGCCGCTCGCCGTCGGGGATATTCCAGCGGCCTCAGGAATC
AAGATCCTTGCAATCACTTTTGGTGGCTGGTTTGCTACCCTGACGGTGGCAGGATATACA
GTGTTAGCCATGCGAAAACTCGTGAAGACAGAGCTTCTTGCACCATCGGAGCCCACGAAG
AAGCCGTCGCCGTTTTCCACGTCGGAGATCTGGGCATGGTCAGCTATATTCGTCGCGTCG
TTCGGCGTCGCATGTTTCAATCCCACGGCGTTTGGTACCACGGCAAGAACATGCCTTCCT
TTCCTGCTTGCTGCTAATGTGCTGGGATACATGGTTGGTTCTGGGTTACCACCTGGCGTC
AAGAAAGTGCTGCATCCGATCATCTCCTGCGCACTCTGTGCAGATTTCGCGGCGCTAGCC
TATGGGTACATCTCAGGGTTTGGACTTGATGCCGTGCTAGGTGCTTACCTCACAAAGGTG
CCCTCTAATCCTGGAGCCGGTGACGTACTAATGACTTTCCTTGGGTCTGTGATCATATCA
TTTGCATTCTCGATCTTCAAGCAGAGAAAGCTTGTGAAGAGGCACGCAACAGAGATTTTC
ACATCAATTGCCATCGCGTCGACATTCTCTCTGTACTCAACTGCTATCATAGGGCGCCTG
ATTGGGCTAGAGCCATCGTTAACCATATCAATACTGCCAAGGTGTATTACTCTGGCGCTG
GCTTTGAGCATAGTGTCTTTCTTTGAAGGTGTAAACTCTTCGGTAACTGCTGTCGTGGTT
GTCCTTACCGGGCTCATCGGTGCGAACTTTGTGCTAGCAGCCATGGAGAAACTTGGTCTG
AACGACCCCATCTCCAGAGGAGTAGGGACAGCTTCCAGCGCTCAAGGACTGGGAACAGCA
GCACTGGCGGCCAAGGAACCTGAAGCGCTCCCTTTCTGCGCCATCGCTTATAGTTTCACG
GGGATTTTCGGCACGCTGATCTGCTCGGTTCCGGCAGTCAGGCAAAGCCTGATATTCATA
GCTGGTTAA

Peptide Sequence

PEP ID

Zm00001d030127_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:107762967:107765646:-1 gene:Zm00001d030127 transcript:Zm00001d030127_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plastidal glycolate/glycerate translocator 1 chloroplastic
Sequence

MAATAMIGITNLRCRHDPLSSLPRATSSAARSCTLLPPRCRRHSSCCSPSSSVSPCRARV
RPTAALKRIPAADTGFMGPANNEATTLKRSSSADLRRRLIVPSSTAGTGHAASASTGVLP
AIIGVAHLLVSLGILLAMDKFLKQAFVAASIKFPSALFGMFCVFSVLVVFDTFVPPLAKA
FIGFFEPATLFIQRWLSLFYVPTLVVLPLAVGDIPAASGIKILAITFGGWFATLTVAGYT
VLAMRKLVKTELLAPSEPTKKPSPFSTSEIWAWSAIFVASFGVACFNPTAFGTTARTCLP
FLLAANVLGYMVGSGLPPGVKKVLHPIISCALCADFAALAYGYISGFGLDAVLGAYLTKV
PSNPGAGDVLMTFLGSVIISFAFSIFKQRKLVKRHATEIFTSIAIASTFSLYSTAIIGRL
IGLEPSLTISILPRCITLALALSIVSFFEGVNSSVTAVVVVLTGLIGANFVLAAMEKLGL
NDPISRGVGTASSAQGLGTAALAAKEPEALPFCAIAYSFTGIFGTLICSVPAVRQSLIFI
AG

Transcript Sequence

Transcript ID

Zm00001d030127_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:107762967:107765646:-1 gene:Zm00001d030127 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plastidal glycolate/glycerate translocator 1 chloroplastic
Sequence

GGAGTCTCCGTCACCACCTCGCCTGCTAGCCTCCTCCGTCTGCTCAAGACGAGGGAGGAG
CAGAGACCGAACTCTGCCGTCTCTTCCTCCTCCCTCTGCACCCCCACGAGCTCCATGGCC
GCCACCGCCATGATTGGGATTACCAACCTACGTTGCCGCCACGACCCGCTCTCCTCCCTT
CCCCGGGCTACGTCGTCGGCCGCCCGGTCCTGTACGCTGCTTCCTCCTCGATGCCGCCGC
CATTCTTCTTGCTGCTCCCCTTCCTCCTCCGTCTCTCCGTGCCGGGCCCGGGTCCGACCA
ACAGCAGCACTGAAGCGCATCCCTGCCGCCGACACCGGCTTCATGGGTCCAGCCAACAAT
GAGGCCACCACGCTTAAACGATCATCGTCGGCCGACCTTCGCCGCCGCCTTATCGTCCCC
AGCTCCACCGCTGGCACCGGACACGCCGCCAGTGCTTCCACAGGAGTGCTGCCCGCCATT
ATCGGGGTGGCGCATCTGCTCGTGTCGCTGGGCATTCTGCTCGCCATGGACAAGTTCCTC
AAGCAGGCATTCGTCGCCGCGTCCATCAAGTTCCCGAGTGCCCTTTTCGGCATGTTCTGT
GTCTTCTCGGTGCTCGTAGTCTTCGACACATTCGTGCCTCCTCTCGCGAAGGCGTTCATT
GGCTTCTTTGAGCCCGCCACGCTGTTCATCCAGAGGTGGCTGTCCTTGTTCTACGTCCCG
ACACTGGTCGTGCTGCCGCTCGCCGTCGGGGATATTCCAGCGGCCTCAGGAATCAAGATC
CTTGCAATCACTTTTGGTGGCTGGTTTGCTACCCTGACGGTGGCAGGATATACAGTGTTA
GCCATGCGAAAACTCGTGAAGACAGAGCTTCTTGCACCATCGGAGCCCACGAAGAAGCCG
TCGCCGTTTTCCACGTCGGAGATCTGGGCATGGTCAGCTATATTCGTCGCGTCGTTCGGC
GTCGCATGTTTCAATCCCACGGCGTTTGGTACCACGGCAAGAACATGCCTTCCTTTCCTG
CTTGCTGCTAATGTGCTGGGATACATGGTTGGTTCTGGGTTACCACCTGGCGTCAAGAAA
GTGCTGCATCCGATCATCTCCTGCGCACTCTGTGCAGATTTCGCGGCGCTAGCCTATGGG
TACATCTCAGGGTTTGGACTTGATGCCGTGCTAGGTGCTTACCTCACAAAGGTGCCCTCT
AATCCTGGAGCCGGTGACGTACTAATGACTTTCCTTGGGTCTGTGATCATATCATTTGCA
TTCTCGATCTTCAAGCAGAGAAAGCTTGTGAAGAGGCACGCAACAGAGATTTTCACATCA
ATTGCCATCGCGTCGACATTCTCTCTGTACTCAACTGCTATCATAGGGCGCCTGATTGGG
CTAGAGCCATCGTTAACCATATCAATACTGCCAAGGTGTATTACTCTGGCGCTGGCTTTG
AGCATAGTGTCTTTCTTTGAAGGTGTAAACTCTTCGGTAACTGCTGTCGTGGTTGTCCTT
ACCGGGCTCATCGGTGCGAACTTTGTGCTAGCAGCCATGGAGAAACTTGGTCTGAACGAC
CCCATCTCCAGAGGAGTAGGGACAGCTTCCAGCGCTCAAGGACTGGGAACAGCAGCACTG
GCGGCCAAGGAACCTGAAGCGCTCCCTTTCTGCGCCATCGCTTATAGTTTCACGGGGATT
TTCGGCACGCTGATCTGCTCGGTTCCGGCAGTCAGGCAAAGCCTGATATTCATAGCTGGT
TAAGAGATGATCTGAATTTGACGGTTTCATTCTTTAGATAAAAGAAGCAGCTTGCTTCCT
CCCTCCGTGTTCAGAAGGTCAGGAAGCAACGCCCCACATGTCAGGTCAGGATCTAATATG
TGTAGGGGCTTGAAAAAAAAAGGCGAATAATTCTGTAATCAGGATGTAACCGAAATACTA
CAGTTTTTTTTTTCTTGTGACAAAATACTACTAGAGGAAGGTAGATCCGTTATTTGTTTG
ACA