Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d030109_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:106376208:106378884:1 gene:Zm00001d030109 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable inactive shikimate kinase like 2 chloroplastic
Sequence	ATGAGGATAGGGGCAGGGGCGAACATGGCTGCGTGCTCCTCCGTTCCCTGCTCCTTCCCC GCGAAGCCTGACCCTCACCGCCGAAGCCCCAGCGGCATCTTAAGCTCTCATCTCCCTCGG CTCCCTGCTACCCAGTTTCGTCGGCTTCGATCACTCTCTGCCGCCGCCTCGCCGCCGGCG AGTCGCCTCCGCCCACGAGCCTCCGTGTCCACGTCGCCCGCCCCGTCTAAGGACTACGAG GCAAGTTCAGAACAAGCTCCCGTCCCGTCGTGTTTTACCCCCATGCACTTCACTGACGGG AACGGAGAGGTGGAGCTGAGACTGGACATCCAAAAGCTCGGCATAGCGAGTTCAAAAGAT GTTTTCGTTGATGTCGATGACACATCCCTACTCATCAGAGCCAAGTCTGACGGGACACTG AGGACTTTGATGAACGTCCAAACACTGTTTGATAGGATTAAGTCTTCCGAGACCATATGG TTCATCGATGAGGACCAGTTGGTGGTGAATCTGAAGAAAGTAGAGCAAGAGTTGAAATGG CCTGATGTAGATGAATCCTGGGAATCCCTCACTTCTGGGATCACCCAGCTACTGACAGGG ATCAGTGTGCACATCGTTGGTGATTCCACGCACATTAATGAGGCAGTTGCTAAAGAGATA GCCGAGGGCATCGGGTACCTTCCGGTTTGCACTAGTGAGCTGCTAGAGAGCGCCACTGAG AAGTCGATTGATACATGGGTGGCTTCTGAAGGAGTGGACTCGGTAGCTGAAGCAGAATCT GTTGTCCTGGAAAGCCTTAGCAGCCATGTCCGCACTGTAGTTGCAACTCTGGGGGGCAAG CAAGGAGCAGCTAGCAGATTCGACAAGTGGCAGTACCTTCACTCTGGGTTCACGGTTTGG CTATCGGTGTCCGACGCAAGTGACGAGGCTAGTGCGAGAGAGGAAGCCCGAAGGAGCGTG AGCAGTGGAAGCGTTTCTTACGCGAAGGCGGACGTGGTGGTGAAGCTCGGCGGATGGGAC CCGGAGTACACGCGGGCTGTTGCGCAGGGCTGCCTCGTCGCACTCAAGCAGCTCACCTTA GCAGACAAGAAGCTAGCAGGGAAGAAGAGCCTCTACATCAGGCTTGGTTGCAGAGGCGAT TGGCCCAACATCGAGCCTCCAGGCTGGGACCCTGAATCCGACGCCCCACCGACCAATATC TGA

Peptide Sequence

PEP ID	Zm00001d030109_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:106376208:106378884:1 gene:Zm00001d030109 transcript:Zm00001d030109_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable inactive shikimate kinase like 2 chloroplastic
Sequence	MRIGAGANMAACSSVPCSFPAKPDPHRRSPSGILSSHLPRLPATQFRRLRSLSAAASPPA SRLRPRASVSTSPAPSKDYEASSEQAPVPSCFTPMHFTDGNGEVELRLDIQKLGIASSKD VFVDVDDTSLLIRAKSDGTLRTLMNVQTLFDRIKSSETIWFIDEDQLVVNLKKVEQELKW PDVDESWESLTSGITQLLTGISVHIVGDSTHINEAVAKEIAEGIGYLPVCTSELLESATE KSIDTWVASEGVDSVAEAESVVLESLSSHVRTVVATLGGKQGAASRFDKWQYLHSGFTVW LSVSDASDEASAREEARRSVSSGSVSYAKADVVVKLGGWDPEYTRAVAQGCLVALKQLTL ADKKLAGKKSLYIRLGCRGDWPNIEPPGWDPESDAPPTNI

Transcript Sequence

Transcript ID	Zm00001d030109_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:106376208:106378884:1 gene:Zm00001d030109 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable inactive shikimate kinase like 2 chloroplastic
Sequence	ATGAGGATAGGGGCAGGGGCGAACATGGCTGCGTGCTCCTCCGTTCCCTGCTCCTTCCCC GCGAAGCCTGACCCTCACCGCCGAAGCCCCAGCGGCATCTTAAGCTCTCATCTCCCTCGG CTCCCTGCTACCCAGTTTCGTCGGCTTCGATCACTCTCTGCCGCCGCCTCGCCGCCGGCG AGTCGCCTCCGCCCACGAGCCTCCGTGTCCACGTCGCCCGCCCCGTCTAAGGACTACGAG GCAAGTTCAGAACAAGCTCCCGTCCCGTCGTGTTTTACCCCCATGCACTTCACTGACGGG AACGGAGAGGTGGAGCTGAGACTGGACATCCAAAAGCTCGGCATAGCGAGTTCAAAAGAT GTTTTCGTTGATGTCGATGACACATCCCTACTCATCAGAGCCAAGTCTGACGGGACACTG AGGACTTTGATGAACGTCCAAACACTGTTTGATAGGATTAAGTCTTCCGAGACCATATGG TTCATCGATGAGGACCAGTTGGTGGTGAATCTGAAGAAAGTAGAGCAAGAGTTGAAATGG CCTGATGTAGATGAATCCTGGGAATCCCTCACTTCTGGGATCACCCAGCTACTGACAGGG ATCAGTGTGCACATCGTTGGTGATTCCACGCACATTAATGAGGCAGTTGCTAAAGAGATA GCCGAGGGCATCGGGTACCTTCCGGTTTGCACTAGTGAGCTGCTAGAGAGCGCCACTGAG AAGTCGATTGATACATGGGTGGCTTCTGAAGGAGTGGACTCGGTAGCTGAAGCAGAATCT GTTGTCCTGGAAAGCCTTAGCAGCCATGTCCGCACTGTAGTTGCAACTCTGGGGGGCAAG CAAGGAGCAGCTAGCAGATTCGACAAGTGGCAGTACCTTCACTCTGGGTTCACGGTTTGG CTATCGGTGTCCGACGCAAGTGACGAGGCTAGTGCGAGAGAGGAAGCCCGAAGGAGCGTG AGCAGTGGAAGCGTTTCTTACGCGAAGGCGGACGTGGTGGTGAAGCTCGGCGGATGGGAC CCGGAGTACACGCGGGCTGTTGCGCAGGGCTGCCTCGTCGCACTCAAGCAGCTCACCTTA GCAGACAAGAAGCTAGCAGGGAAGAAGAGCCTCTACATCAGGCTTGGTTGCAGAGGCGAT TGGCCCAACATCGAGCCTCCAGGCTGGGACCCTGAATCCGACGCCCCACCGACCAATATC TGAAACAATCCTCCGCCCAGTTGTATTCTAGGAGAATTCTCTGCATCACCATTCCGGACT AGTTTTTTCAGTGTAATAAATAAGAGAGGAACTTGTCATCTGTCTGTTGATGCATAAAAT GAACTCGACTAACGTTTAGTGGGGTA