Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d030101_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:105700155:105702010:-1 gene:Zm00001d030101 gene_biotype:protein_coding transcript_biotype:protein_coding description:BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes /.../ource: NCBI BLink).
Sequence	ATGGAGACGCCGCTGTCCACCAGGAGGATCACCCGCTCGCTGGCCGCCGCATCCGCCCAG AAGAGCGCCGCCGCAGGGATGGACTCCGCCGCCCTCTTCTCCCTGTCCAAGAACGCCGTC GCGGGGGAGACACACGCACAGACGCGCGCGGCCCTTCACGACATCACCAACGACTCCCCC GTCGTCGGCCTCGCCGCGGGCAGCCTCCACGCCACCGACACCACCCCCGCCAAGACCCGC CGCAGGGCCCCGCGCTGCACGCCAGGCTCCGGGGAGGCGCTCCTGCGCGGCCAGGTCAAG GCGCTCCTGCACAAGGTCGACGAGGAGCAGGGCTGCGCCGCCGCCGGCGCCCTCGTCAGG CCCAAGCGCATCCAGGCGCTGCTCGGGGTCTCCAGGTCCCCGGCCCAGCTTCTTGCGCCC ACGCCGGCCAACACGCCGCAGATCGGCCCCGTCTCCGCGCCCAGGGAAGGCGTCGGGCTG CATGACGGCGCCACCGTCGTGCCCTGCGTCCTCGACGAAGAGGAACTGCTGATTCCTAAG CTTCAGGTCATTGCAGGTTCCATCCCTCCACCTCAGCCAGAGGAGAAGTTGGGCGAGTGC CAGCTGAACCGTGCGCTGGTGTTCGACGACTCCCCGGACAATTCCGACGAGTCCAGCGGA TCAGCCGTCCCATCATCCGTCTCCCTCCAGGAGGGCAGCGCCGGGAAGACATCGTCACCT GAGGAGGGTGACAGCTCCTCAGCCTGGTCCACTCAGGTCCATGCCAGCTCCGAGAAGGGC GATCAAGAAGAGCTGGACGTGGAGGAGCTGGCGGCAGATTACACTGAAGAAGAGGAGGAG TTCGAGGAGGAGGATGACTGGGAAGAAGACAGCGATGACGGCTGCTACGATGATCTGTGC GATGAGATGAGCCGGATGACCGTGTTGGATGAAGGGGAGAAGAAGACCGGGCTGCCGCAG TTCGAGGGGAAGCACACCAGGTTCATCTACAACAGTGACGACGAGATCGAGCGGGAGGAG GTGGCCGATGCGGCTGAAGCTAGGGCGGAGCTCGGCGCACTGATGCTCAGGGGGCTGCCG GTGCCGGAGGGGAGGCACCTACGCTTCCACGACGACGAGGATGACGAGGAATAA

Peptide Sequence

PEP ID	Zm00001d030101_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:105700155:105702010:-1 gene:Zm00001d030101 transcript:Zm00001d030101_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes /.../ource: NCBI BLink).
Sequence	METPLSTRRITRSLAAASAQKSAAAGMDSAALFSLSKNAVAGETHAQTRAALHDITNDSP VVGLAAGSLHATDTTPAKTRRRAPRCTPGSGEALLRGQVKALLHKVDEEQGCAAAGALVR PKRIQALLGVSRSPAQLLAPTPANTPQIGPVSAPREGVGLHDGATVVPCVLDEEELLIPK LQVIAGSIPPPQPEEKLGECQLNRALVFDDSPDNSDESSGSAVPSSVSLQEGSAGKTSSP EEGDSSSAWSTQVHASSEKGDQEELDVEELAADYTEEEEEFEEEDDWEEDSDDGCYDDLC DEMSRMTVLDEGEKKTGLPQFEGKHTRFIYNSDDEIEREEVADAAEARAELGALMLRGLP VPEGRHLRFHDDEDDEE

Transcript Sequence

Transcript ID	Zm00001d030101_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:105700155:105702010:-1 gene:Zm00001d030101 gene_biotype:protein_coding transcript_biotype:protein_coding description:BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes /.../ource: NCBI BLink).
Sequence	CCCAGCTCTCTCTCCCGCTCCTTCGCCCTCGCACGTCGTTTCTTTCCTCGCGAGCGACGC GCGCTTCTCACCCGCATCGCCGATGGAGACGCCGCTGTCCACCAGGAGGATCACCCGCTC GCTGGCCGCCGCATCCGCCCAGAAGAGCGCCGCCGCAGGGATGGACTCCGCCGCCCTCTT CTCCCTGTCCAAGAACGCCGTCGCGGGGGAGACACACGCACAGACGCGCGCGGCCCTTCA CGACATCACCAACGACTCCCCCGTCGTCGGCCTCGCCGCGGGCAGCCTCCACGCCACCGA CACCACCCCCGCCAAGACCCGCCGCAGGGCCCCGCGCTGCACGCCAGGCTCCGGGGAGGC GCTCCTGCGCGGCCAGGTCAAGGCGCTCCTGCACAAGGTCGACGAGGAGCAGGGCTGCGC CGCCGCCGGCGCCCTCGTCAGGCCCAAGCGCATCCAGGCGCTGCTCGGGGTCTCCAGGTC CCCGGCCCAGCTTCTTGCGCCCACGCCGGCCAACACGCCGCAGATCGGCCCCGTCTCCGC GCCCAGGGAAGGCGTCGGGCTGCATGACGGCGCCACCGTCGTGCCCTGCGTCCTCGACGA AGAGGAACTGCTGATTCCTAAGCTTCAGGTCATTGCAGGTTCCATCCCTCCACCTCAGCC AGAGGAGAAGTTGGGCGAGTGCCAGCTGAACCGTGCGCTGGTGTTCGACGACTCCCCGGA CAATTCCGACGAGTCCAGCGGATCAGCCGTCCCATCATCCGTCTCCCTCCAGGAGGGCAG CGCCGGGAAGACATCGTCACCTGAGGAGGGTGACAGCTCCTCAGCCTGGTCCACTCAGGT CCATGCCAGCTCCGAGAAGGGCGATCAAGAAGAGCTGGACGTGGAGGAGCTGGCGGCAGA TTACACTGAAGAAGAGGAGGAGTTCGAGGAGGAGGATGACTGGGAAGAAGACAGCGATGA CGGCTGCTACGATGATCTGTGCGATGAGATGAGCCGGATGACCGTGTTGGATGAAGGGGA GAAGAAGACCGGGCTGCCGCAGTTCGAGGGGAAGCACACCAGGTTCATCTACAACAGTGA CGACGAGATCGAGCGGGAGGAGGTGGCCGATGCGGCTGAAGCTAGGGCGGAGCTCGGCGC ACTGATGCTCAGGGGGCTGCCGGTGCCGGAGGGGAGGCACCTACGCTTCCACGACGACGA GGATGACGAGGAATAAGAATGTTCAGATTGGGTATCGGCAGTGGTTGTCTTTCCCTGACA CCAGCCAGCCAAAATTCATCATGGGAGCTTTGTTTCTACAATCGGGTACAGGGAGCAAAT AGCTCTTTTGCCAATTCACAACTCAACTCTTCTGAAATGAAACATAGTACTATTTCCTGG TTACTTAGGTCTTGTTTGGTTATTTCAATGTCACGTGGATTAATGTGTATTAAAATAAAT TGAGATGTATTTGCTAT