Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d030009_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:98960698:98962339:-1 gene:Zm00001d030009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
Sequence

ATGGCGACCAACAGTGCCCTGGCGAAGCTGGCGCCGCTGGAAGCCATCCTGTTCGACATC
GACGGCACGCTCTGCGACTCCGACCCCATCCACTTCTGCGCCTTCCGAGAGCTCCTGCAG
CAGGCCGGCTTCAACGGCGGTGTCCCCATCACGGAGGAGTTCTACAGCGCCAACATCAGC
GGGGGCCACAACGACGACCTCGCCAGGTCGCTGTTCCCGGGCATGGATCACCAGAAGGCG
ATGCGGTTCATGGATGACAAAGAAGCTATGTTCAGAAAGTTGGCGCCTGGGCAGCTGAAG
CCCGTGGATGGGCTGCAGGAGCTGTGCGGATGGATGGAAGGCCGCGACCTGAAGCGCGCG
GCGGTGACGAACGCCCCGAGGGCGAACGCCGAGCTGATGCTGTCGCTGTTGGGCCTCACC
GACTTCTTCCCGGTGCTCGTCATCGGGAGCGAGTGCGACCGGGCCAAGCCGTTCCCTGAC
CCGTACCTCAAGGCGCTCCAGCTCATCGGCGCATCGCCTCAACACACCTTCATATTTGAA
GACTCTGCATCGGGGGTCCGGGCCGGTGTGGCTGCCGGAGTGCCCGTGGTTGGCCTGACG
ACGAGGAACCCCGGGAAGGTGCTGAAAGACGCAGGGGCCAGCTTGCTGGTCAAGGATTTT
CAGGACCCGGAGCTGATGTCCGTGCTTCAACAGGTGGAGGTCGAACCCGCAGCGGCGAAT
GCGCAAGGCTGA

Peptide Sequence

PEP ID

Zm00001d030009_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:98960698:98962339:-1 gene:Zm00001d030009 transcript:Zm00001d030009_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
Sequence

MATNSALAKLAPLEAILFDIDGTLCDSDPIHFCAFRELLQQAGFNGGVPITEEFYSANIS
GGHNDDLARSLFPGMDHQKAMRFMDDKEAMFRKLAPGQLKPVDGLQELCGWMEGRDLKRA
AVTNAPRANAELMLSLLGLTDFFPVLVIGSECDRAKPFPDPYLKALQLIGASPQHTFIFE
DSASGVRAGVAAGVPVVGLTTRNPGKVLKDAGASLLVKDFQDPELMSVLQQVEVEPAAAN
AQG

Transcript Sequence

Transcript ID

Zm00001d030009_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:98960698:98962339:-1 gene:Zm00001d030009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
Sequence

ACCAGCACCAGCGCCAGCAACAGCAACAGCTGTGGTTTCAGCACAAGAAGGGCCAGGAAG
AAGCGCAGCTGCGTTTCTTGGACGGTGAGCGCGGCTACTCCGGCGGACATGGCGACCAAC
AGTGCCCTGGCGAAGCTGGCGCCGCTGGAAGCCATCCTGTTCGACATCGACGGCACGCTC
TGCGACTCCGACCCCATCCACTTCTGCGCCTTCCGAGAGCTCCTGCAGCAGGCCGGCTTC
AACGGCGGTGTCCCCATCACGGAGGAGTTCTACAGCGCCAACATCAGCGGGGGCCACAAC
GACGACCTCGCCAGGTCGCTGTTCCCGGGCATGGATCACCAGAAGGCGATGCGGTTCATG
GATGACAAAGAAGCTATGTTCAGAAAGTTGGCGCCTGGGCAGCTGAAGCCCGTGGATGGG
CTGCAGGAGCTGTGCGGATGGATGGAAGGCCGCGACCTGAAGCGCGCGGCGGTGACGAAC
GCCCCGAGGGCGAACGCCGAGCTGATGCTGTCGCTGTTGGGCCTCACCGACTTCTTCCCG
GTGCTCGTCATCGGGAGCGAGTGCGACCGGGCCAAGCCGTTCCCTGACCCGTACCTCAAG
GCGCTCCAGCTCATCGGCGCATCGCCTCAACACACCTTCATATTTGAAGACTCTGCATCG
GGGGTCCGGGCCGGTGTGGCTGCCGGAGTGCCCGTGGTTGGCCTGACGACGAGGAACCCC
GGGAAGGTGCTGAAAGACGCAGGGGCCAGCTTGCTGGTCAAGGATTTTCAGGACCCGGAG
CTGATGTCCGTGCTTCAACAGGTGGAGGTCGAACCCGCAGCGGCGAATGCGCAAGGCTGA
TGCGTCGGTCACTGCGGACAACTAAGAAATGAAATGTCGTGCTGGACTAGCCTTCAGCGA
TTCTTTCAGAGTGGAATAGCTGTGTAACTGCATCGTGTAATAAACTAACTCCGGTCGGTT
CCTCGGCTGGAACCTGGAGACTAGCTTCTTGGTGGAT