Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029988_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:97704275:97706222:-1 gene:Zm00001d029988 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrotransposon protein
Sequence	ATGGCGGTCCAGGCGCATTATCACCACCACTACCACCGCGAGTCCCCTTTCCTCGTCAGC GGCGCGCCGGAGGGCAGCCGGTTGGCGGCGGCGATGGAGCTGCATCATCAGGCGCAGAAG GAGGCTATGGCGCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGA GATTACGGCGGCGGGAGGAAGCGGCAGCGCGAGGCGGAGCCCATGTCGTCGCAGTTCTTC TCTCTGCAGCAGCAACCGCAGGCGCAGGGGCCCAAGGTGATCAACCTGGCGCAACTTCAG AAGCGGACGGCGATGGGCCTCCGGCTCGACTTCGACGAGGGCTCGGAGCACGTGTCGTGC ACGTCCCCGGCCTCGGCCTCGGCCTCATGTCTCCTCTCTAAAGAGCTCGCCGCGCAGCGC GATCAGCACAGGAACGAGATGGACCGGCTGATCCAGGAACATGCGGACAGGCTCCGGCGC GCGCTGGCCGACACTCGGCGGCGGCACTACCGTTCGCTGGTCGGCGCGGCGGAGGCGGCG GCTGCTCAACGGGTAAGGGAGAAGGAGGCGGAGGCGTCGGAGGCCGCGCGGCGCCGCGCG GACCTGGAGGACCGGGTGGCGCGGCTGAGGGCGGAGGCGGCGGCGTGGCAGGCCAAGGAC GCAGCGGATCAGTCCACAGCCGCGGCGCTCCACGCGCAGCTGCAGAAGGCGGCGGCGGCG CAGGCGAGGGGCAAGGCCGAGGAGGAGGACAACGTGGGCGCCGCGGCGGACGACGCCGGG TCCTGCTTCGTCGACCCGGACAGGGTCGTGGAGGTCGCCCCGCCGCGCCCGCTGGCCAGG CCGTGCCGGACGTGCGGGCAGCGTTCGGCCTCCGTCGTGCTGCTCCCGTGCCGCCACCTC TGCGTCTGCGCCGAGTGCGAGCCCGCCGTCCCCGCTGCCGGCGCCGTCGCGGCTGCCTGC CCCATGTGCCGTGGCGCGGTGACCGGCACCGTGCAAGTGTTCTTCTCCTAG

Peptide Sequence

PEP ID	Zm00001d029988_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:97704275:97706222:-1 gene:Zm00001d029988 transcript:Zm00001d029988_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrotransposon protein
Sequence	MAVQAHYHHHYHRESPFLVSGAPEGSRLAAAMELHHQAQKEAMAPQQAQAPPLFLDFSHG DYGGGRKRQREAEPMSSQFFSLQQQPQAQGPKVINLAQLQKRTAMGLRLDFDEGSEHVSC TSPASASASCLLSKELAAQRDQHRNEMDRLIQEHADRLRRALADTRRRHYRSLVGAAEAA AAQRVREKEAEASEAARRRADLEDRVARLRAEAAAWQAKDAADQSTAAALHAQLQKAAAA QARGKAEEEDNVGAAADDAGSCFVDPDRVVEVAPPRPLARPCRTCGQRSASVVLLPCRHL CVCAECEPAVPAAGAVAAACPMCRGAVTGTVQVFFS

Transcript Sequence

Transcript ID	Zm00001d029988_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:97704275:97706222:-1 gene:Zm00001d029988 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrotransposon protein
Sequence	CACCAACCCTCTCTCCTCATGAAATCGAGCCAGCACCAGCCACGCCAACAGCCTGCCACC CGTGTCATCCCTGCATGCGCGAAGCAGGTGAGACTGGACAGGAGCAGCCAGCCCCATGAC GCCCTCTTAAGACGAGGACGAGGAGGAGGCGGTGGACCAGTTCGTTCGCGTTGCCCGCGA CTCTCTCCGTCCTCCTACTGCCCACCCGACTCACACGCTTGGCACGCGCGTGCTTCCACC CGTCCGTCGCCTCTCTCTCGGCTGCCTGATTGATTTGGTTGCCCCGGTTCCAGCAATGGC GGTCCAGGCGCATTATCACCACCACTACCACCGCGAGTCCCCTTTCCTCGTCAGCGGCGC GCCGGAGGGCAGCCGGTTGGCGGCGGCGATGGAGCTGCATCATCAGGCGCAGAAGGAGGC TATGGCGCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAGATTA CGGCGGCGGGAGGAAGCGGCAGCGCGAGGCGGAGCCCATGTCGTCGCAGTTCTTCTCTCT GCAGCAGCAACCGCAGGCGCAGGGGCCCAAGGTGATCAACCTGGCGCAACTTCAGAAGCG GACGGCGATGGGCCTCCGGCTCGACTTCGACGAGGGCTCGGAGCACGTGTCGTGCACGTC CCCGGCCTCGGCCTCGGCCTCATGTCTCCTCTCTAAAGAGCTCGCCGCGCAGCGCGATCA GCACAGGAACGAGATGGACCGGCTGATCCAGGAACATGCGGACAGGCTCCGGCGCGCGCT GGCCGACACTCGGCGGCGGCACTACCGTTCGCTGGTCGGCGCGGCGGAGGCGGCGGCTGC TCAACGGGTAAGGGAGAAGGAGGCGGAGGCGTCGGAGGCCGCGCGGCGCCGCGCGGACCT GGAGGACCGGGTGGCGCGGCTGAGGGCGGAGGCGGCGGCGTGGCAGGCCAAGGACGCAGC GGATCAGTCCACAGCCGCGGCGCTCCACGCGCAGCTGCAGAAGGCGGCGGCGGCGCAGGC GAGGGGCAAGGCCGAGGAGGAGGACAACGTGGGCGCCGCGGCGGACGACGCCGGGTCCTG CTTCGTCGACCCGGACAGGGTCGTGGAGGTCGCCCCGCCGCGCCCGCTGGCCAGGCCGTG CCGGACGTGCGGGCAGCGTTCGGCCTCCGTCGTGCTGCTCCCGTGCCGCCACCTCTGCGT CTGCGCCGAGTGCGAGCCCGCCGTCCCCGCTGCCGGCGCCGTCGCGGCTGCCTGCCCCAT GTGCCGTGGCGCGGTGACCGGCACCGTGCAAGTGTTCTTCTCCTAGCAAGCTTTAGGAAA GGGGAAAATGCTAAAAGAAAAAGCAAGACAAAATCGTTGCTCCTGCCAAAAGGAATGATC CGTGAAAATGGGGAATTGTTCATGATAGTCCGTTCTCTGCTTCTTTTTTTTTTCTCTCCC TCTCTCAGTTGTTTATTATAATCCTTCTATTAGTATATAAGTCGATCTCTTCTAGTACTG CTAGGAATAGGATTAGGTTCCTGCTTTATTTTCCCTTGGTTTCTTCTGGAAGGCATATGA TCGACCATGGACCCCAGTACGTACATTTTGGAAGGCAATGAATGATTGTGCAAAATTTT