Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029892_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:92733943:92735043:1 gene:Zm00001d029892 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metalloendoproteinase 1-MMP
Sequence	ATGTCGCGCGCGCCTCGTATCGTATCGGTGCTGTTCCTGTTGCTTGGCCCCCTCCCCGTC TCCTTGGTCCACGTGACCGCCGACGGGCCCGTGACGGCGACGGTTCACCGGCAGGACGGC ACCGCGTGGCGCTCGTTCAAGCAGCTGCTGGACGCGCGGCGAGGCAGCCACGTTGAGGGC CTCGGCGAGCTCAAGCGCTACCTGGCGAGGTTCGGGTACATGCCTGGGGCGGGGGCGGAG CACGAGCCGACGACGGACGCGTTCGACGCGCACATGGAGGCCGCCGTACGGCGGTACCAG TCCATGCTTAGCCTGCCGGTCACGGGGCAGCTCGACTCCACCACGCTGGACCGGATCATG GCCCCGCGCTGCGGCGTCGGCGACGGCGGCCACGCTGTGCCGGTATCCCTCTCGGGGTCG GCGGCGGCGAGCCCGGACGGCGCCGTCAGCCGGTTCACGTTCTTCAAGGGTGAGCCGCGG TGGACGCAGCCGGACCCGCTCGTGCTCACGTACGCCATCTCGCCGACCGCCACCGTCGAC TACCTGCCTGCCGGGACCGTGCGCGCGGTGTTCCGGCGCGCGTTCGCGCGGTGGGCGCGG GTCATCCCCGTGGGCTTCGTCGAGACCGAAGACTACGAGGCGGCCGACATCAGGGTGGGC TTCTACGTGGGCAGCCACGGTGATGGGATCCCCTTCGACGGACCGCTCGGCGTGCTCGGC CATGCCTTCTCCCCGAAGAACGGGCGCCTCCACCTCGACGCCGCAGAGAGGTGGGCGGTT GACATGGACACGGAAACGGTGCACTCGGCCGTCGACTTGGAGTCCGTGGCCACGCACGAG ATTGGGCACGTCCTCGGGCTGGGGCACTCGTCGTCACCCAAGGCGGTCATGTACCCGAGC CTCAGCCCGCGGGAAAAGAAGGCGGAGCTCACCGTCGACGACATCGAAGGCGTCCAGTGG CTGTATGGGTCCAACCCGGGATTCAGCCTCAGCTCGCTTTACCAGCAGGACTCCTCCATG GCGTCGGGAGGGAGCAGTTGGCTTCCTGCCTCGGCTAGATTAGTTTGTGCAGTTCTGGTC ATGCTAGTGACGCACTTGTAG

Peptide Sequence

PEP ID	Zm00001d029892_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:92733943:92735043:1 gene:Zm00001d029892 transcript:Zm00001d029892_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metalloendoproteinase 1-MMP
Sequence	MSRAPRIVSVLFLLLGPLPVSLVHVTADGPVTATVHRQDGTAWRSFKQLLDARRGSHVEG LGELKRYLARFGYMPGAGAEHEPTTDAFDAHMEAAVRRYQSMLSLPVTGQLDSTTLDRIM APRCGVGDGGHAVPVSLSGSAAASPDGAVSRFTFFKGEPRWTQPDPLVLTYAISPTATVD YLPAGTVRAVFRRAFARWARVIPVGFVETEDYEAADIRVGFYVGSHGDGIPFDGPLGVLG HAFSPKNGRLHLDAAERWAVDMDTETVHSAVDLESVATHEIGHVLGLGHSSSPKAVMYPS LSPREKKAELTVDDIEGVQWLYGSNPGFSLSSLYQQDSSMASGGSSWLPASARLVCAVLV MLVTHL

Transcript Sequence

Transcript ID	Zm00001d029892_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:92733943:92735043:1 gene:Zm00001d029892 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metalloendoproteinase 1-MMP
Sequence	ATGTCGCGCGCGCCTCGTATCGTATCGGTGCTGTTCCTGTTGCTTGGCCCCCTCCCCGTC TCCTTGGTCCACGTGACCGCCGACGGGCCCGTGACGGCGACGGTTCACCGGCAGGACGGC ACCGCGTGGCGCTCGTTCAAGCAGCTGCTGGACGCGCGGCGAGGCAGCCACGTTGAGGGC CTCGGCGAGCTCAAGCGCTACCTGGCGAGGTTCGGGTACATGCCTGGGGCGGGGGCGGAG CACGAGCCGACGACGGACGCGTTCGACGCGCACATGGAGGCCGCCGTACGGCGGTACCAG TCCATGCTTAGCCTGCCGGTCACGGGGCAGCTCGACTCCACCACGCTGGACCGGATCATG GCCCCGCGCTGCGGCGTCGGCGACGGCGGCCACGCTGTGCCGGTATCCCTCTCGGGGTCG GCGGCGGCGAGCCCGGACGGCGCCGTCAGCCGGTTCACGTTCTTCAAGGGTGAGCCGCGG TGGACGCAGCCGGACCCGCTCGTGCTCACGTACGCCATCTCGCCGACCGCCACCGTCGAC TACCTGCCTGCCGGGACCGTGCGCGCGGTGTTCCGGCGCGCGTTCGCGCGGTGGGCGCGG GTCATCCCCGTGGGCTTCGTCGAGACCGAAGACTACGAGGCGGCCGACATCAGGGTGGGC TTCTACGTGGGCAGCCACGGTGATGGGATCCCCTTCGACGGACCGCTCGGCGTGCTCGGC CATGCCTTCTCCCCGAAGAACGGGCGCCTCCACCTCGACGCCGCAGAGAGGTGGGCGGTT GACATGGACACGGAAACGGTGCACTCGGCCGTCGACTTGGAGTCCGTGGCCACGCACGAG ATTGGGCACGTCCTCGGGCTGGGGCACTCGTCGTCACCCAAGGCGGTCATGTACCCGAGC CTCAGCCCGCGGGAAAAGAAGGCGGAGCTCACCGTCGACGACATCGAAGGCGTCCAGTGG CTGTATGGGTCCAACCCGGGATTCAGCCTCAGCTCGCTTTACCAGCAGGACTCCTCCATG GCGTCGGGAGGGAGCAGTTGGCTTCCTGCCTCGGCTAGATTAGTTTGTGCAGTTCTGGTC ATGCTAGTGACGCACTTGTAG