Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029889_T036
CDS Infomation	cds chromosome:B73_RefGen_v4:1:92556766:92563832:1 gene:Zm00001d029889 gene_biotype:protein_coding transcript_biotype:protein_coding description:G2484-1 protein
Sequence	ATGGCCACAGAAAATACTCAAGCTGGAGGTTCTTTGAAGGATACTAGTGATGATAGTAAG AAAATATCTACTGTGGAGTCTGGTAAAGAACAGCTATCAGAAAGGAAAGTAACTGAAAGT TCTGGGGGTGGCCTCTCAGACAACTGCAATATAGACGACATCATTAAGGGTAGAAGTTCA CCGCCGCGGCAGCATCCAATCCCTGAGTGTTCTGATTTAGTGAATTTTCCATTCACAGAT CCACAGCATTTGCAGCTACGTGCACAGATATTTGTTTATGGAGCTCTTATTCAAGGAACA CCACCAGGAGAGGCTTACATGGTGGCGGCTTTTGGAGAACCTGTAGGTGGTGGCAAACCT ACATGGGAGGCTGCTTGGCGAGCTGCTTTTGAAAGATTTCAGTATAAAAAATCACCTCAT GTCAGTTTAGAGACTCCCACAAGTTCACTTATAGGTAGTTCTGTGCCTGAGAAAGCTAGC AAAGGTACAGCAATTACAACTGTGCCAGCTAGCAAAAAAGTTGGTAAAACTGTGGCGCCA GCACATCCTGCTGTAACCCTACACTCTCCAACTTCTGATTTTCCTTTTGGTAGTTCTACA TTTAATCTGCAACGAGGCACTCATCTGGATTTTAGCCAGGCAGTATCACCATTTGCGTAT AATTCACACATGAGACATCCGTCTCCTGGTGTTGCCCCCTGGTATACGCAGAGCCCTGGT CCACGCCCTGCAGCCTGGTTAATTCCACCACAAAACTTAATATTTGATTCATCAATGCAA CCGGTTATTCCTACAAATGAAACTGCGAAGGGTGCATCATCCAAAAACATATCCGTTTCA CATACTGTTTCATCTGGTGTTCTTCCCAGCCTGGCACCTTCTATTGTTTCTTCTCCAATA GCAGTTGTGAGTGATGGAAAACAGAAGGCTGCTTCTAGCTCTAAGCGTGGCACAACATCA CAAAAGTCAAGAAAAAAAAAGAAAGCTTCAGCAAGTTCAGAACAGCAACCTGTAATTGCT TCTCCTCATCTCAAAATGAACATGCCATCTTTTACTCCTGCCATTAAGCACACAGCAGGA TTGACCTTATGCGGTAGCAAGCCTGTTCCTAACATGGGCCAGATTGCCTCTGAACATAAC TACCAGATCACTGGTGGTATGGATAGTGATCAAAGAATCATCTTTTCAGAACAGATCCGT GGTGCAGTAGAACAATCAGCTGCACAAGCTAAAAGTGCAAGCATTGACTCAGTGGAGGCA GTTAAGCACAAGGAGGGCATATGGAGCCATCTATCTACAATCTCAAGGAATAAGTTACCT CCAAAAGTTGAAGAGAAACTTACCTCAGTTGCAGCTGCTGCTGAAGCAGCAGTTTCTGTT GCAAAGGCAGCTGCAGAAGCTGCCAAGATGGCGTCAGAGGCTGCATTGCAGGCAAAAATG ATGGCAGATGAAGCTCTTAGCTCTTCTATATCTGTAATGTCCATGCATCACGAAGCTGAT CAATATAATGTCATTAGCAGTCCGCCTATCTTGTCAAGTTCAACGCCAGCATCATCTCTG AAAACCAAGAACAAGAGTCATGCCCCAGGTTCCATCATTTCTGTGGCACGGGAGGCTGCT AGAAAGAGGGTTGAAGAGGCATCTGCAGCTGCAAAACGTGCTGAAAACTTGGATGCCATA TTGAAAGCTGCAGAGCTTGCTGCGGAAGCTGTGTTCAGGGCAGGAACCATTATTGGAATG GGAGAACCACTACCTTTTACCCTAAGAGAGCTTTTGGAAGCTGGGCCGAATGGCTACTGG AAGTCTGCGAGTGCGAGAAATAAATCTGGAAGTTGTAATGATAATCCAGTAACAGAAACA TTGGAGGTAGATGCACCTGCTAACTTTAACAAATCTGGCAGAAAGCGCGGTCGGAAACCT AAATATGATCAAGCACTACCAAATTCGGAGCCATCTTCAAGCTGCAAAGAATTACAGTCA TATGGAATACACTCAGGACATGGAGTTGTTGAAGATGTTCCCATTACTGTGTCACCTAAT GGTAACAATGTTACATCACCAATAAACATTATCTGGAATGGCATTGAAAAGGGATCTGCA GTTGAGGTTTTATCTGACAAAGGTGGGTTTGGAGTAGCTTGGTTTTCTGCTAAGGTTATT GATATAAATGGAAATAATGTTTTTGTCAACTATGACAACCACAATGGATCTGGTCCTCAT GAAGAATGGGTGCCATTGCGACAAGAGGGGGATAAGCCGCCTCAGATACGTCTTGCGCAC CCTGCTACCCTCTCAAAATTCAAAACTAGGAAACGACTCAGGGAAACAGCAGGAAGTTGT TTATGGGTTATCGGAGATCATGTAGACGCTTGGGTCAACAATAGCTGTTGGCGAGAGGGA GTTATTTCTCAGAATTATGAGACTGATGAGACGAAATATGATGTACATTTTTCAGTTGGA GGTGGTGGTGAGTCCTTAGTAGTTGATGCTTGGAGCCTTCGTCCATCGCGTGTTTGGAAA GATGGTCAATGGGTAGAGTGGTCCCATGCAAGAGAAAGGAAATCCAAATCTAATAAGGGC GATTCACCTCCTGAGAAACGCCAAAGAATCGACTTGCTTCAAACTGGTGGCAATCTATCT GTTCTTGGCGAAGTGGGGGGTTCTTCGAAGGACAATAATATAAACAATGCAAAAAACCCG GAGGAATTAAAGCCATTGTCTTTGTCTCAGGGGGAAATTGTTTTCAACATTGGGAAAAGT GTAGTTGAGAATAAATCTGATTCTCTTGCATTCAGACGTCCTGGACTACAAAAAGAAGGA TCAAAGGTCGTCTATGGTGTTCCAAAACATGGAAAGAAGAAGAAGTTTATGGAAGTAAGC AAACATTATGATGCAGGCCAATCTGACAAGATTTCTGAGGGCAATTCATCTAACAGATTC GTGAAACATCTGATGCCACAATTGCCAAGGCCACGTGAAAATGCTTCCAAAGTTGACCCT ATTAGAGGAAGGAGAGTAGGTGAAACAAGGTCTAGATTACCTAAACCTACGAAGTCCCAC AATGTTGGAGCTAGCAGTGTTCCTGGAAAGGATTCCTTGCCTATGCAAATGCATGTTCCA AATTCTGGTGTTTCTGAAAGGAGTTCTAGTTTTGCAGGAAGTTCGACAAGCACTTCCAAC AATGAGAAGCCCACTTCAGAAAATAATAATCCGGTGCTTGGTGTGGGCCTTAGAACTGAA GTTTCTTCTGGTCCTGAACTGCAAACTGCATCTACTGTATCCACTACTAATCGAGCTAAA AGGAAATATGTTCCCACTGTCAGTAACACAAACAGAGGTATACTAAAAACCTCTGAAAAG TCGAGTTCTGATTCTGCTGAGCCCCGAAGGACTACTTCTGATTCTGCTGAACCTAGACGA TCTAACAGGCGAATTCAACCAACTTCAAGGGTAAGTACAAGAACTACATCTATGTTGCAA CGTATT

Peptide Sequence

PEP ID	Zm00001d029889_P036
PEP Infomation	pep chromosome:B73_RefGen_v4:1:92556766:92563832:1 gene:Zm00001d029889 transcript:Zm00001d029889_T036 gene_biotype:protein_coding transcript_biotype:protein_coding description:G2484-1 protein
Sequence	MATENTQAGGSLKDTSDDSKKISTVESGKEQLSERKVTESSGGGLSDNCNIDDIIKGRSS PPRQHPIPECSDLVNFPFTDPQHLQLRAQIFVYGALIQGTPPGEAYMVAAFGEPVGGGKP TWEAAWRAAFERFQYKKSPHVSLETPTSSLIGSSVPEKASKGTAITTVPASKKVGKTVAP AHPAVTLHSPTSDFPFGSSTFNLQRGTHLDFSQAVSPFAYNSHMRHPSPGVAPWYTQSPG PRPAAWLIPPQNLIFDSSMQPVIPTNETAKGASSKNISVSHTVSSGVLPSLAPSIVSSPI AVVSDGKQKAASSSKRGTTSQKSRKKKKASASSEQQPVIASPHLKMNMPSFTPAIKHTAG LTLCGSKPVPNMGQIASEHNYQITGGMDSDQRIIFSEQIRGAVEQSAAQAKSASIDSVEA VKHKEGIWSHLSTISRNKLPPKVEEKLTSVAAAAEAAVSVAKAAAEAAKMASEAALQAKM MADEALSSSISVMSMHHEADQYNVISSPPILSSSTPASSLKTKNKSHAPGSIISVAREAA RKRVEEASAAAKRAENLDAILKAAELAAEAVFRAGTIIGMGEPLPFTLRELLEAGPNGYW KSASARNKSGSCNDNPVTETLEVDAPANFNKSGRKRGRKPKYDQALPNSEPSSSCKELQS YGIHSGHGVVEDVPITVSPNGNNVTSPINIIWNGIEKGSAVEVLSDKGGFGVAWFSAKVI DINGNNVFVNYDNHNGSGPHEEWVPLRQEGDKPPQIRLAHPATLSKFKTRKRLRETAGSC LWVIGDHVDAWVNNSCWREGVISQNYETDETKYDVHFSVGGGGESLVVDAWSLRPSRVWK DGQWVEWSHARERKSKSNKGDSPPEKRQRIDLLQTGGNLSVLGEVGGSSKDNNINNAKNP EELKPLSLSQGEIVFNIGKSVVENKSDSLAFRRPGLQKEGSKVVYGVPKHGKKKKFMEVS KHYDAGQSDKISEGNSSNRFVKHLMPQLPRPRENASKVDPIRGRRVGETRSRLPKPTKSH NVGASSVPGKDSLPMQMHVPNSGVSERSSSFAGSSTSTSNNEKPTSENNNPVLGVGLRTE VSSGPELQTASTVSTTNRAKRKYVPTVSNTNRGILKTSEKSSSDSAEPRRTTSDSAEPRR SNRRIQPTSRVSTRTTSMLQRI

Transcript Sequence

Transcript ID	Zm00001d029889_T036
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:92556766:92563832:1 gene:Zm00001d029889 gene_biotype:protein_coding transcript_biotype:protein_coding description:G2484-1 protein
Sequence	CTGAAGATCATGGGGCCTCAGTTGATGGTATCCAGAGCTCAAAACAATGCAATACCAGAA ATATAGAATCTGCACCTGGTTCTCAGGAGACTAGTGCAGCAGGAGGTGATAGAAGCTTCT CATTTGAGGTGGGAGCTCCACCAAATGTTGCTGAGAAAGCCCATAGCCCTGTTTGGAGCC CTTTCCCTAAATACATTACTTCTCAGATGGCCACAGAAAATACTCAAGCTGGAGGTTCTT TGAAGGATACTAGTGATGATAGTAAGAAAATATCTACTGTGGAGTCTGGTAAAGAACAGC TATCAGAAAGGAAAGTAACTGAAAGTTCTGGGGGTGGCCTCTCAGACAACTGCAATATAG ACGACATCATTAAGGGTAGAAGTTCACCGCCGCGGCAGCATCCAATCCCTGAGTGTTCTG ATTTAGTGAATTTTCCATTCACAGATCCACAGCATTTGCAGCTACGTGCACAGATATTTG TTTATGGAGCTCTTATTCAAGGAACACCACCAGGAGAGGCTTACATGGTGGCGGCTTTTG GAGAACCTGTAGGTGGTGGCAAACCTACATGGGAGGCTGCTTGGCGAGCTGCTTTTGAAA GATTTCAGTATAAAAAATCACCTCATGTCAGTTTAGAGACTCCCACAAGTTCACTTATAG GTAGTTCTGTGCCTGAGAAAGCTAGCAAAGGTACAGCAATTACAACTGTGCCAGCTAGCA AAAAAGTTGGTAAAACTGTGGCGCCAGCACATCCTGCTGTAACCCTACACTCTCCAACTT CTGATTTTCCTTTTGGTAGTTCTACATTTAATCTGCAACGAGGCACTCATCTGGATTTTA GCCAGGCAGTATCACCATTTGCGTATAATTCACACATGAGACATCCGTCTCCTGGTGTTG CCCCCTGGTATACGCAGAGCCCTGGTCCACGCCCTGCAGCCTGGTTAATTCCACCACAAA ACTTAATATTTGATTCATCAATGCAACCGGTTATTCCTACAAATGAAACTGCGAAGGGTG CATCATCCAAAAACATATCCGTTTCACATACTGTTTCATCTGGTGTTCTTCCCAGCCTGG CACCTTCTATTGTTTCTTCTCCAATAGCAGTTGTGAGTGATGGAAAACAGAAGGCTGCTT CTAGCTCTAAGCGTGGCACAACATCACAAAAGTCAAGAAAAAAAAAGAAAGCTTCAGCAA GTTCAGAACAGCAACCTGTAATTGCTTCTCCTCATCTCAAAATGAACATGCCATCTTTTA CTCCTGCCATTAAGCACACAGCAGGATTGACCTTATGCGGTAGCAAGCCTGTTCCTAACA TGGGCCAGATTGCCTCTGAACATAACTACCAGATCACTGGTGGTATGGATAGTGATCAAA GAATCATCTTTTCAGAACAGATCCGTGGTGCAGTAGAACAATCAGCTGCACAAGCTAAAA GTGCAAGCATTGACTCAGTGGAGGCAGTTAAGCACAAGGAGGGCATATGGAGCCATCTAT CTACAATCTCAAGGAATAAGTTACCTCCAAAAGTTGAAGAGAAACTTACCTCAGTTGCAG CTGCTGCTGAAGCAGCAGTTTCTGTTGCAAAGGCAGCTGCAGAAGCTGCCAAGATGGCGT CAGAGGCTGCATTGCAGGCAAAAATGATGGCAGATGAAGCTCTTAGCTCTTCTATATCTG TAATGTCCATGCATCACGAAGCTGATCAATATAATGTCATTAGCAGTCCGCCTATCTTGT CAAGTTCAACGCCAGCATCATCTCTGAAAACCAAGAACAAGAGTCATGCCCCAGGTTCCA TCATTTCTGTGGCACGGGAGGCTGCTAGAAAGAGGGTTGAAGAGGCATCTGCAGCTGCAA AACGTGCTGAAAACTTGGATGCCATATTGAAAGCTGCAGAGCTTGCTGCGGAAGCTGTGT TCAGGGCAGGAACCATTATTGGAATGGGAGAACCACTACCTTTTACCCTAAGAGAGCTTT TGGAAGCTGGGCCGAATGGCTACTGGAAGTCTGCGAGTGCGAGAAATAAATCTGGAAGTT GTAATGATAATCCAGTAACAGAAACATTGGAGGTAGATGCACCTGCTAACTTTAACAAAT CTGGCAGAAAGCGCGGTCGGAAACCTAAATATGATCAAGCACTACCAAATTCGGAGCCAT CTTCAAGCTGCAAAGAATTACAGTCATATGGAATACACTCAGGACATGGAGTTGTTGAAG ATGTTCCCATTACTGTGTCACCTAATGGTAACAATGTTACATCACCAATAAACATTATCT GGAATGGCATTGAAAAGGGATCTGCAGTTGAGGTTTTATCTGACAAAGGTGGGTTTGGAG TAGCTTGGTTTTCTGCTAAGGTTATTGATATAAATGGAAATAATGTTTTTGTCAACTATG ACAACCACAATGGATCTGGTCCTCATGAAGAATGGGTGCCATTGCGACAAGAGGGGGATA AGCCGCCTCAGATACGTCTTGCGCACCCTGCTACCCTCTCAAAATTCAAAACTAGGAAAC GACTCAGGGAAACAGCAGGAAGTTGTTTATGGGTTATCGGAGATCATGTAGACGCTTGGG TCAACAATAGCTGTTGGCGAGAGGGAGTTATTTCTCAGAATTATGAGACTGATGAGACGA AATATGATGTACATTTTTCAGTTGGAGGTGGTGGTGAGTCCTTAGTAGTTGATGCTTGGA GCCTTCGTCCATCGCGTGTTTGGAAAGATGGTCAATGGGTAGAGTGGTCCCATGCAAGAG AAAGGAAATCCAAATCTAATAAGGGCGATTCACCTCCTGAGAAACGCCAAAGAATCGACT TGCTTCAAACTGGTGGCAATCTATCTGTTCTTGGCGAAGTGGGGGGTTCTTCGAAGGACA ATAATATAAACAATGCAAAAAACCCGGAGGAATTAAAGCCATTGTCTTTGTCTCAGGGGG AAATTGTTTTCAACATTGGGAAAAGTGTAGTTGAGAATAAATCTGATTCTCTTGCATTCA GACGTCCTGGACTACAAAAAGAAGGATCAAAGGTCGTCTATGGTGTTCCAAAACATGGAA AGAAGAAGAAGTTTATGGAAGTAAGCAAACATTATGATGCAGGCCAATCTGACAAGATTT CTGAGGGCAATTCATCTAACAGATTCGTGAAACATCTGATGCCACAATTGCCAAGGCCAC GTGAAAATGCTTCCAAAGTTGACCCTATTAGAGGAAGGAGAGTAGGTGAAACAAGGTCTA GATTACCTAAACCTACGAAGTCCCACAATGTTGGAGCTAGCAGTGTTCCTGGAAAGGATT CCTTGCCTATGCAAATGCATGTTCCAAATTCTGGTGTTTCTGAAAGGAGTTCTAGTTTTG CAGGAAGTTCGACAAGCACTTCCAACAATGAGAAGCCCACTTCAGAAAATAATAATCCGG TGCTTGGTGTGGGCCTTAGAACTGAAGTTTCTTCTGGTCCTGAACTGCAAACTGCATCTA CTGTATCCACTACTAATCGAGCTAAAAGGAAATATGTTCCCACTGTCAGTAACACAAACA GAGGTATACTAAAAACCTCTGAAAAGTCGAGTTCTGATTCTGCTGAGCCCCGAAGGACTA CTTCTGATTCTGCTGAACCTAGACGATCTAACAGGCGAATTCAACCAACTTCAAGGGTAA GTACAAGAACTACATCTATGTTGCAACGTATT