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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029885_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:92217234:92219505:1 gene:Zm00001d029885 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G154580 description:Zinc finger protein CONSTANS-LIKE 5
Sequence

ATGTCGGCAGCGTCGAGCGCCACGTGCCGCGTATGCGGTGGCGCAGGGGAGTGCGCGTGC
CGCCACGGCCACGGGATCGGCGGCGCGCGGTGCGGCGGGGTCGTCGCTGTCGCCGACCTC
AACCGCGGGTTTCCTGCGTTGTGGCACCAGCCGGAGGAGGAACCCAGTGGCGCTGGCGCG
GCGCCGGGGCTGCACGAGTTCCAGTTCTTCGGCCACGACGAGGACCACGACAGCGTCACG
TGGCTGTTCACCGACCCGTCTCCCCACCTGCACCGCGGGCCGGCGGCCGCCGAGGTCGGG
AACGGGGTGGCCGAGGCTGAGCAGCGGAGGCCGCCGCCGGTGTTCGACGGCGGGTACGCG
CACGCACAGTACGGGGAGCTGCCGGGTCACGGCCTCACGTTCGACGTGCCGCTGAGCGGC
CGACGCGGCGGCGAGGTGGCCTCCGTGGCGCCGGTTCTGGAGGCAGGGCTGGGGCTAGGC
GGTGGCGGTGGCGGCGATCTGGCCACGTCCTCCAGCGCCACAATCATGTCCTTCTGCGGG
ACCACGTTCACAGACGCGGCGAGCGCCGTCCCGGGCGACGCGGCCGCAGCGGCGCCCAAC
GGCAGCGCAAGCGGTGCCGCCGACCCGGCAGTGGACCGGGAGGCGAAGGTGATGCGGTAC
AAGGAGAAGCGGAAGAGGAGGCGCTACGAGAAGCAGATTCGGTACGCCTCCCGCAAGGCC
TATGCAGAGATGCGGCCGCGCGTCAAGGGCCGCTTCGCCAAGGTGCCCGACGGTGAGGCT
CCGTCGCCACCGGCGCCGGCCGCAGCATGCTACGAACCAGGCCGGCTCGACCTCGGATGG
TTCCGTTCATAG

Peptide Sequence

PEP ID

Zm00001d029885_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:92217234:92219505:1 gene:Zm00001d029885 transcript:Zm00001d029885_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G154580 description:Zinc finger protein CONSTANS-LIKE 5
Sequence

MSAASSATCRVCGGAGECACRHGHGIGGARCGGVVAVADLNRGFPALWHQPEEEPSGAGA
APGLHEFQFFGHDEDHDSVTWLFTDPSPHLHRGPAAAEVGNGVAEAEQRRPPPVFDGGYA
HAQYGELPGHGLTFDVPLSGRRGGEVASVAPVLEAGLGLGGGGGGDLATSSSATIMSFCG
TTFTDAASAVPGDAAAAAPNGSASGAADPAVDREAKVMRYKEKRKRRRYEKQIRYASRKA
YAEMRPRVKGRFAKVPDGEAPSPPAPAAACYEPGRLDLGWFRS

Transcript Sequence

Transcript ID

Zm00001d029885_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:92217234:92219505:1 gene:Zm00001d029885 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G154580 description:Zinc finger protein CONSTANS-LIKE 5
Sequence

CATATCTCTTGCTCCTCTCTTATTGGCCGCATCAGCATCACGGCACGCGCGTACTTATTC
TTCTCCCCCGCCCTAGTTCTCTCCCTCTCTTCTCCTCCACACACCAAGCCTGCCCCGCCG
ATCGAGCACGTCATCATTCGCTCGCCCAGCTCGCGGGAGGAGCAGGAGCTAGGAAGAAGC
AAACAAGCAGGCCGGGGGCCGGGGGGAGAGACAGAGTTCACAAACCACACAGGGAAGAGT
GGTGGAAGGAGGAGGAAGAGGGGTACGTCAAGAGAGCGAGTTCATTATTCATACGTGCGG
CGGCGACATCGTCGCGCGCACGCAGGATGTCGGCAGCGTCGAGCGCCACGTGCCGCGTAT
GCGGTGGCGCAGGGGAGTGCGCGTGCCGCCACGGCCACGGGATCGGCGGCGCGCGGTGCG
GCGGGGTCGTCGCTGTCGCCGACCTCAACCGCGGGTTTCCTGCGTTGTGGCACCAGCCGG
AGGAGGAACCCAGTGGCGCTGGCGCGGCGCCGGGGCTGCACGAGTTCCAGTTCTTCGGCC
ACGACGAGGACCACGACAGCGTCACGTGGCTGTTCACCGACCCGTCTCCCCACCTGCACC
GCGGGCCGGCGGCCGCCGAGGTCGGGAACGGGGTGGCCGAGGCTGAGCAGCGGAGGCCGC
CGCCGGTGTTCGACGGCGGGTACGCGCACGCACAGTACGGGGAGCTGCCGGGTCACGGCC
TCACGTTCGACGTGCCGCTGAGCGGCCGACGCGGCGGCGAGGTGGCCTCCGTGGCGCCGG
TTCTGGAGGCAGGGCTGGGGCTAGGCGGTGGCGGTGGCGGCGATCTGGCCACGTCCTCCA
GCGCCACAATCATGTCCTTCTGCGGGACCACGTTCACAGACGCGGCGAGCGCCGTCCCGG
GCGACGCGGCCGCAGCGGCGCCCAACGGCAGCGCAAGCGGTGCCGCCGACCCGGCAGTGG
ACCGGGAGGCGAAGGTGATGCGGTACAAGGAGAAGCGGAAGAGGAGGCGCTACGAGAAGC
AGATTCGGTACGCCTCCCGCAAGGCCTATGCAGAGATGCGGCCGCGCGTCAAGGGCCGCT
TCGCCAAGGTGCCCGACGGTGAGGCTCCGTCGCCACCGGCGCCGGCCGCAGCATGCTACG
AACCAGGCCGGCTCGACCTCGGATGGTTCCGTTCATAGCAAAGAGGCCACTGGTTAAATT
CTTTTTTTTAGAGTGTGTAACGTACAGATAAACTACAAGCTTGATAGGGTGTTTGATTTG
AGGAATAAATTAATTTATTATCT