Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d029850_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:89958471:89961843:-1 gene:Zm00001d029850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 2
Sequence	ATGGACAGGGACAGCAGCTCGTCGGTCTCGGCGTCGGACGGGAGCTCGGAGGCGGGGGAG CGCGGCGGGTGCTGCTCGTCGCCGCCGTCCACGCGGAGCCTCGTCGACACGGCGGGCAAC AACCTCATCAGCCGCACCGCGTCCGACGCGTCCACGTCCCTCTCGGACCGGTGCAGCAGC GTCGACGTCGACCACAGCGGGCCGTTCCAGCCCGCCGCCGCCGTGGCCAAGCTCATCGGC CGGTCGTCCCCGCCGTCCGCCGCCGCGTCGCTCAGACGGCTCAGCATCAAGCCCCGCGCC GACGTGCTCGACCGCCGCTCCACCGAGGACGAGATGGAGCTGGTGAAGGAGCGCTTCTCT AAGCTCCTGCTGGGCGAGGACATGTCCGGCGGCGGCAAGGGCGTCTGCACCGCCGTCGCC ATCTCCAACGCCATCACCAACCTCTACGCGACGGTGTTCGGGAGCTGCCACAAGTTGGAG CCGCTGCCGGCGGGGAAGAAGGCGATGTGGACAAGAGAGATGGACTGCCTCCTCTCCGTC TGCGACTACATCGTCCAGTTCTACCCGTCCACGCAGACCCTGCCCGATGGGACCAAAGTT GAGGTCATGGCGACCAGACCAAGGTCGGACATCTACATCAACCTTCCCGCGCTCGAGAAG CTCGACGCCATGCTCATCGACATTCTGGACAGCTTCCAGAAGGCGGAGTTCTGGTACGCG GACGCCGGGACGAGGTCGTTCGGCTCGGTCACCTCGTCCTCGTCGTCGAGGATGTCGTGT TCGTCGTCATTCAGGAGGTCGGCTCACCGGAACGACGATAAGTGGTGGCTGCCGGTGCCC TGCGTCCCGGACGCCGGCCTCACCGACAAGGCGCGCAAGGACCTGCAGCAGAGGCGCGAC TGCGCCAACCAGATCCACAAGGCCGCTGTCTCCATCAACAGCGGCGTCCTCGGAGACATG GAGGTGCCGGAGTCGTTCATGGCCGTGCTCCCCAAGAGCGGTCGGGCAAGCGTGGGGGAC TCGGTGTACCGCGTCATGCTTGGCGCCGACAAGTTCTCGCCGGAGTTCCTGCTCGACACG CTTGACATCTCGTCGGAGCACGACGCGCTGGCGATGGCCGACCGGGTGGAGGCCGCCATG TACGTGTGGCGGCGCAAGGCTAGCGGCAGCCACGGCAAGCTGCCGTGGAGCAAGGTCAAG GAGCTCGCGGCCGACGACGACGACAAGAACGTGACGCTGGCCAACAGGGCCGAGAGCCTC CTGCTCTGCATCAAGCACCGCTTCCCTGGCCTGTCGCAGACCACCCTGGACACCAGCAAG ATCCAGTTCAACAAGGATGTTGGGCAAGCGATCCTGGAGAGCTACTCGAGGGTGTTGGAG AGCTTGGCTTTCAACATTGTTTCGTGGATCGATGATGTCCTTTTCGTCGACAGGTCGATA AGGAAACTGAGTGATAACCTCAAGTCCTGA

Peptide Sequence

PEP ID	Zm00001d029850_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:89958471:89961843:-1 gene:Zm00001d029850 transcript:Zm00001d029850_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 2
Sequence	MDRDSSSSVSASDGSSEAGERGGCCSSPPSTRSLVDTAGNNLISRTASDASTSLSDRCSS VDVDHSGPFQPAAAVAKLIGRSSPPSAAASLRRLSIKPRADVLDRRSTEDEMELVKERFS KLLLGEDMSGGGKGVCTAVAISNAITNLYATVFGSCHKLEPLPAGKKAMWTREMDCLLSV CDYIVQFYPSTQTLPDGTKVEVMATRPRSDIYINLPALEKLDAMLIDILDSFQKAEFWYA DAGTRSFGSVTSSSSSRMSCSSSFRRSAHRNDDKWWLPVPCVPDAGLTDKARKDLQQRRD CANQIHKAAVSINSGVLGDMEVPESFMAVLPKSGRASVGDSVYRVMLGADKFSPEFLLDT LDISSEHDALAMADRVEAAMYVWRRKASGSHGKLPWSKVKELAADDDDKNVTLANRAESL LLCIKHRFPGLSQTTLDTSKIQFNKDVGQAILESYSRVLESLAFNIVSWIDDVLFVDRSI RKLSDNLKS

Transcript Sequence

Transcript ID	Zm00001d029850_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:89958471:89961843:-1 gene:Zm00001d029850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 2
Sequence	ATCACACCTCTCGACCGCCCCCTTCTCTTTCATCAATCAAGGATCACAGAGCTGCCAAAG CCAGAGGAGCGTTATCAGAGCAGGGAGGAAGAAGAGCGTTGTGTTCGACGCAGGAGAATT TCGAGGGACAGCGACTCGACTCGACTCGAAGCTCTGGAGAGATCTAGCGGGGCTCCGGTG CAGCCGATGCATGGCAACTCGCAAGGGCTGAGCTGCTCGTCACTGGCGTAGGAAAGTGCC GTCGTCGCCATGGACAGGGACAGCAGCTCGTCGGTCTCGGCGTCGGACGGGAGCTCGGAG GCGGGGGAGCGCGGCGGGTGCTGCTCGTCGCCGCCGTCCACGCGGAGCCTCGTCGACACG GCGGGCAACAACCTCATCAGCCGCACCGCGTCCGACGCGTCCACGTCCCTCTCGGACCGG TGCAGCAGCGTCGACGTCGACCACAGCGGGCCGTTCCAGCCCGCCGCCGCCGTGGCCAAG CTCATCGGCCGGTCGTCCCCGCCGTCCGCCGCCGCGTCGCTCAGACGGCTCAGCATCAAG CCCCGCGCCGACGTGCTCGACCGCCGCTCCACCGAGGACGAGATGGAGCTGGTGAAGGAG CGCTTCTCTAAGCTCCTGCTGGGCGAGGACATGTCCGGCGGCGGCAAGGGCGTCTGCACC GCCGTCGCCATCTCCAACGCCATCACCAACCTCTACGCGACGGTGTTCGGGAGCTGCCAC AAGTTGGAGCCGCTGCCGGCGGGGAAGAAGGCGATGTGGACAAGAGAGATGGACTGCCTC CTCTCCGTCTGCGACTACATCGTCCAGTTCTACCCGTCCACGCAGACCCTGCCCGATGGG ACCAAAGTTGAGGTCATGGCGACCAGACCAAGGTCGGACATCTACATCAACCTTCCCGCG CTCGAGAAGCTCGACGCCATGCTCATCGACATTCTGGACAGCTTCCAGAAGGCGGAGTTC TGGTACGCGGACGCCGGGACGAGGTCGTTCGGCTCGGTCACCTCGTCCTCGTCGTCGAGG ATGTCGTGTTCGTCGTCATTCAGGAGGTCGGCTCACCGGAACGACGATAAGTGGTGGCTG CCGGTGCCCTGCGTCCCGGACGCCGGCCTCACCGACAAGGCGCGCAAGGACCTGCAGCAG AGGCGCGACTGCGCCAACCAGATCCACAAGGCCGCTGTCTCCATCAACAGCGGCGTCCTC GGAGACATGGAGGTGCCGGAGTCGTTCATGGCCGTGCTCCCCAAGAGCGGTCGGGCAAGC GTGGGGGACTCGGTGTACCGCGTCATGCTTGGCGCCGACAAGTTCTCGCCGGAGTTCCTG CTCGACACGCTTGACATCTCGTCGGAGCACGACGCGCTGGCGATGGCCGACCGGGTGGAG GCCGCCATGTACGTGTGGCGGCGCAAGGCTAGCGGCAGCCACGGCAAGCTGCCGTGGAGC AAGGTCAAGGAGCTCGCGGCCGACGACGACGACAAGAACGTGACGCTGGCCAACAGGGCC GAGAGCCTCCTGCTCTGCATCAAGCACCGCTTCCCTGGCCTGTCGCAGACCACCCTGGAC ACCAGCAAGATCCAGTTCAACAAGGATGTTGGGCAAGCGATCCTGGAGAGCTACTCGAGG GTGTTGGAGAGCTTGGCTTTCAACATTGTTTCGTGGATCGATGATGTCCTTTTCGTCGAC AGGTCGATAAGGAAACTGAGTGATAACCTCAAGTCCTGAGTTCTTTATCCTGCACTGAAG CTTCCCAGCAAAAAGGTTTTAGATGTCTGTTGGTGAAGCTGCAGAAGAAGGGTGCGTGAC TGTAGTAGCGGTAGTAGGGTGATTTTGCTGACCTAGAGAGATGCAAGCCTCTAGCTTTGC AAGAATGCACAATGCAGAGTAGCGTGTCTGACCAACAGTGAACGTGTGTGATTTTCGTGT CCTTTTTATTTTTCAGCTCTCGCGCTCTTAGCTTGGCAGCACGAAGATTGGTGAAAGGGA TCAAAATGTCCAATAGC