Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029846_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:89860313:89863306:-1 gene:Zm00001d029846 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translocase of chloroplast 120 chloroplastic
Sequence

ATGGAGAACGGCGGTGGCGTCGGTGAAGGGCGCTCGGAGAATCGGGCGGGCGAGAACGGC
GGAGTCGCCGAGGCAGCCACTGCGGCGGATGAGGGAGATTGTGATGTGGTGGTGGAGGGC
GGAGATGAAGGGGACATGCCGCCCGGTGCGGTGGCGGCGGGCGATCACCAGCCAATGGTG
ACGCCGAACACCAGAGCGGTGCTGGAAACAGGACAGCTTGCGGCAGACAAGTGGGACGAG
GACGATACTCCCCGTTTCATTGACGTGGAGGAAAGCTTTGCCGATGATGTGAATCAAGAT
CACGTGGAGGAGAATGCCATGGGGCAATCGATCAGGGAATACGTGACCGCAGCTGTTTTG
GCTGATCGTAAAAAGGAGAGGTTAGACAAGGACCATAACTTTTTTGCAACTCGTGATAAC
AAGGCTGAGGTCGCTGCACAATCTGGGAGCGAGTATGAAGATGTAAAAGATGGTACTTTG
GTGTATCAAAGCAAAGAGCAGCCAGGGACGAGCACGGAAGATATTGCTTCCTCACATAGC
AGGCCAGGGACAGTCACACATTCTGCAGCTGAGCCTGCTGTTGCCATTGAGGAATTGGAT
GACTCAAGCTCCTCAGCTGATGAGAATACCGCCACCTCTGCTCCTCCTGCACAATTCTCA
AGCGGTAGTTCTACACCTGCGCAATCCAGCAGTGCTGCTTCTGCTCGTTCTACTAATGGT
CCCTCTTTGCCATCTCGTCCTGCTGGCCTTGGATCATCGTCTTCCCTGTCACAGCCTCCT
GCTCGTTCTGTTCAACAGGTCCATGCCAACAGGCCAGCCATTGTGGAAAGGGGAACCCAG
GGGGCTACTGAGGATGATGGAGACGAGAATGATGAAATCCATGAAAAGCTTCAAATGATC
CGGGTTAAGTTTCTTCGCCTTGCTAACAGGTTTGGGCAAACATATCATAATATGGTCGTT
TCACAGGTTCTGTACCGGCTTGGGCTGGCAGAACAACTTAGAAGAACTACTTCTAATGGG
TCATTTAGCATTGACCGTGCAAGAGACATGGCAGAACGCCTTGAAGCTGCTGGAAATGCG
CCCCTTGATTTTTCATGCACCATCTTGGTTCTTGGTAAAACTGGGGTCGGTAAGAGTGCT
ACCATTAATTCAGTTTTTGATGATACCAGGTTGGATACAAACGCTTTTGATTCTAGTACT
AGGAAGGTTCAAGAAGTAGTTGGTATGGTTGAGGGAATCAAAGTGAAAGTGATTGATACA
CCTGGACTTTCCTGCTCATCTTTAGAACAACACCGCAACCAGAAGGTTCTCAACTCTGTC
AAGAGACTTATTAGCAAAAACCCTCCAGATATTGTTCTTTATTTTGATAGGTTGGATATG
CAGAGCAGGGACAATTGTGACGTCCCTCTGCTGCAAACCATCACAAAAGTGTTTGGAGCA
TCGGTTTGGTTTAATGCCATTGTCGTGTTAACTCATGCTGCATCTGCGCCACCAGATGGG
CAGAATGGAATTCCTCTGAGCTATGAGATGTTTGTCACCCAGAGATCTCATGTAGTGCAA
CAAGCTATAAGGCAAGCTGCTGGTGATGTACGCCTTATGAATCCAGTATCCCTCGTGGAA
AACCACTCAGCATGCAGGACAAATAGGGCTGGCCAGAGGGTATTGCCAAATGGACAAGTC
TGGAAGCCACAGTTACTGCTGCTTTGTTTTGCTTCAAAGGTGTTAGCAGAAGCCAATGTG
CTCCTTAAGTTGCAGGATAGTCCCATTGGTAAACTTTCTCGTACAAGGATTCCTCCACTG
CCTTTCCTCCTCTCTTCCCTTCTTCAGTCTCGTGCCCCACTGAAGTTACCAGAGGAGCAA
TTTGGTGGTGATGATGATGATCTTGAAGATGATTTGGCAGATGATTCTGATTCAGATGAT
GGTTCAGATTATGATGATTTACCTCCATTTAAGCGTCTCACAAAAGCTCAGCTTGCCAAG
CTGAACAGGGAGCAGAGGAAGGCCTATCTTGAGGAGCTAGATTACAGAGAGAAGTTGTTC
TATCAAAAACAGCTGAAAGAGGAAAGAAAACGTCGTAAATTGATGAAGAAAATGGCAGCA
GAAGCCAGTGCTCGTGCAAATGATTTCAGCAACAGCAACCTAGAAGATGATGCTACTACT
CCAACTAATGTTTCAGTGCCTATGCCTGACATGGTACTGCCCTCATCTTTTGATTCTGAC
TACCCTAGCCATCGCTATCGTTTCCTGGATACACCAAGTGAATGGCTTGTCAGACCTGTA
TTGGAAACACAGGGCTGGGACCATGATGTTGGTTACGAGGGACTTAATGTTGAAAGATTG
TTTGCCGTAAAAGGTAAAGTTCCTCTATCAGTGTCTGGCCAGCTTACAAAAGACAAGAAG
GATTGCTCCCTGCAAATGGAGGTTGCAAGTTCAATTAAGCATGCTGAAGGTAAGACTACT
TCACTTGGGCTTGATTTGCAGTCTGTCGGCAGGGATATGGCATACACAATCCGTGGCGAA
TCGAGATTTAAGAACTTCAGGCGCAACAATACATCTGCTGGGATATCTGCTACGCTTCTT
GGGGATTCAGTATCAGCTGGTATGAAGATTGAGGACAAACTGATAGTGAACAAGCAGCTT
AGGGTCCTGGTTAGCAGCGGGGCCATGAGTGGGAGGGGAGACATGGCCTATGGAGGCCGC
CTTGAAGCAACGATGAGAGACAAAGATTACCCGATTGGGCGGATGCTTTCCACTGTTGCA
TTATCTGTTGTGGATTGGCACGGGGATCTGGCAATTGGCTGCAACATCCAGTCTCAGATC
CCCGCTGGAAGAGCTAGCAACTTGGTTGGCCACGCTAATCTAAGCAACAAGGGGACTGGC
CAAGTCGGGATTCGCCTCAACAGCTCGGAGCATCTTGAGATCGCACTCGTGGCCCTCGTG
CCGATATTCCAGAACATCATGAAGCTGTTACAGAATTACTCGGAATCTGGCTAG

Peptide Sequence

PEP ID

Zm00001d029846_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:89860313:89863306:-1 gene:Zm00001d029846 transcript:Zm00001d029846_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translocase of chloroplast 120 chloroplastic
Sequence

MENGGGVGEGRSENRAGENGGVAEAATAADEGDCDVVVEGGDEGDMPPGAVAAGDHQPMV
TPNTRAVLETGQLAADKWDEDDTPRFIDVEESFADDVNQDHVEENAMGQSIREYVTAAVL
ADRKKERLDKDHNFFATRDNKAEVAAQSGSEYEDVKDGTLVYQSKEQPGTSTEDIASSHS
RPGTVTHSAAEPAVAIEELDDSSSSADENTATSAPPAQFSSGSSTPAQSSSAASARSTNG
PSLPSRPAGLGSSSSLSQPPARSVQQVHANRPAIVERGTQGATEDDGDENDEIHEKLQMI
RVKFLRLANRFGQTYHNMVVSQVLYRLGLAEQLRRTTSNGSFSIDRARDMAERLEAAGNA
PLDFSCTILVLGKTGVGKSATINSVFDDTRLDTNAFDSSTRKVQEVVGMVEGIKVKVIDT
PGLSCSSLEQHRNQKVLNSVKRLISKNPPDIVLYFDRLDMQSRDNCDVPLLQTITKVFGA
SVWFNAIVVLTHAASAPPDGQNGIPLSYEMFVTQRSHVVQQAIRQAAGDVRLMNPVSLVE
NHSACRTNRAGQRVLPNGQVWKPQLLLLCFASKVLAEANVLLKLQDSPIGKLSRTRIPPL
PFLLSSLLQSRAPLKLPEEQFGGDDDDLEDDLADDSDSDDGSDYDDLPPFKRLTKAQLAK
LNREQRKAYLEELDYREKLFYQKQLKEERKRRKLMKKMAAEASARANDFSNSNLEDDATT
PTNVSVPMPDMVLPSSFDSDYPSHRYRFLDTPSEWLVRPVLETQGWDHDVGYEGLNVERL
FAVKGKVPLSVSGQLTKDKKDCSLQMEVASSIKHAEGKTTSLGLDLQSVGRDMAYTIRGE
SRFKNFRRNNTSAGISATLLGDSVSAGMKIEDKLIVNKQLRVLVSSGAMSGRGDMAYGGR
LEATMRDKDYPIGRMLSTVALSVVDWHGDLAIGCNIQSQIPAGRASNLVGHANLSNKGTG
QVGIRLNSSEHLEIALVALVPIFQNIMKLLQNYSESG

Transcript Sequence

Transcript ID

Zm00001d029846_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:89860313:89863306:-1 gene:Zm00001d029846 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translocase of chloroplast 120 chloroplastic
Sequence

ATGGAGAACGGCGGTGGCGTCGGTGAAGGGCGCTCGGAGAATCGGGCGGGCGAGAACGGC
GGAGTCGCCGAGGCAGCCACTGCGGCGGATGAGGGAGATTGTGATGTGGTGGTGGAGGGC
GGAGATGAAGGGGACATGCCGCCCGGTGCGGTGGCGGCGGGCGATCACCAGCCAATGGTG
ACGCCGAACACCAGAGCGGTGCTGGAAACAGGACAGCTTGCGGCAGACAAGTGGGACGAG
GACGATACTCCCCGTTTCATTGACGTGGAGGAAAGCTTTGCCGATGATGTGAATCAAGAT
CACGTGGAGGAGAATGCCATGGGGCAATCGATCAGGGAATACGTGACCGCAGCTGTTTTG
GCTGATCGTAAAAAGGAGAGGTTAGACAAGGACCATAACTTTTTTGCAACTCGTGATAAC
AAGGCTGAGGTCGCTGCACAATCTGGGAGCGAGTATGAAGATGTAAAAGATGGTACTTTG
GTGTATCAAAGCAAAGAGCAGCCAGGGACGAGCACGGAAGATATTGCTTCCTCACATAGC
AGGCCAGGGACAGTCACACATTCTGCAGCTGAGCCTGCTGTTGCCATTGAGGAATTGGAT
GACTCAAGCTCCTCAGCTGATGAGAATACCGCCACCTCTGCTCCTCCTGCACAATTCTCA
AGCGGTAGTTCTACACCTGCGCAATCCAGCAGTGCTGCTTCTGCTCGTTCTACTAATGGT
CCCTCTTTGCCATCTCGTCCTGCTGGCCTTGGATCATCGTCTTCCCTGTCACAGCCTCCT
GCTCGTTCTGTTCAACAGGTCCATGCCAACAGGCCAGCCATTGTGGAAAGGGGAACCCAG
GGGGCTACTGAGGATGATGGAGACGAGAATGATGAAATCCATGAAAAGCTTCAAATGATC
CGGGTTAAGTTTCTTCGCCTTGCTAACAGGTTTGGGCAAACATATCATAATATGGTCGTT
TCACAGGTTCTGTACCGGCTTGGGCTGGCAGAACAACTTAGAAGAACTACTTCTAATGGG
TCATTTAGCATTGACCGTGCAAGAGACATGGCAGAACGCCTTGAAGCTGCTGGAAATGCG
CCCCTTGATTTTTCATGCACCATCTTGGTTCTTGGTAAAACTGGGGTCGGTAAGAGTGCT
ACCATTAATTCAGTTTTTGATGATACCAGGTTGGATACAAACGCTTTTGATTCTAGTACT
AGGAAGGTTCAAGAAGTAGTTGGTATGGTTGAGGGAATCAAAGTGAAAGTGATTGATACA
CCTGGACTTTCCTGCTCATCTTTAGAACAACACCGCAACCAGAAGGTTCTCAACTCTGTC
AAGAGACTTATTAGCAAAAACCCTCCAGATATTGTTCTTTATTTTGATAGGTTGGATATG
CAGAGCAGGGACAATTGTGACGTCCCTCTGCTGCAAACCATCACAAAAGTGTTTGGAGCA
TCGGTTTGGTTTAATGCCATTGTCGTGTTAACTCATGCTGCATCTGCGCCACCAGATGGG
CAGAATGGAATTCCTCTGAGCTATGAGATGTTTGTCACCCAGAGATCTCATGTAGTGCAA
CAAGCTATAAGGCAAGCTGCTGGTGATGTACGCCTTATGAATCCAGTATCCCTCGTGGAA
AACCACTCAGCATGCAGGACAAATAGGGCTGGCCAGAGGGTATTGCCAAATGGACAAGTC
TGGAAGCCACAGTTACTGCTGCTTTGTTTTGCTTCAAAGGTGTTAGCAGAAGCCAATGTG
CTCCTTAAGTTGCAGGATAGTCCCATTGGTAAACTTTCTCGTACAAGGATTCCTCCACTG
CCTTTCCTCCTCTCTTCCCTTCTTCAGTCTCGTGCCCCACTGAAGTTACCAGAGGAGCAA
TTTGGTGGTGATGATGATGATCTTGAAGATGATTTGGCAGATGATTCTGATTCAGATGAT
GGTTCAGATTATGATGATTTACCTCCATTTAAGCGTCTCACAAAAGCTCAGCTTGCCAAG
CTGAACAGGGAGCAGAGGAAGGCCTATCTTGAGGAGCTAGATTACAGAGAGAAGTTGTTC
TATCAAAAACAGCTGAAAGAGGAAAGAAAACGTCGTAAATTGATGAAGAAAATGGCAGCA
GAAGCCAGTGCTCGTGCAAATGATTTCAGCAACAGCAACCTAGAAGATGATGCTACTACT
CCAACTAATGTTTCAGTGCCTATGCCTGACATGGTACTGCCCTCATCTTTTGATTCTGAC
TACCCTAGCCATCGCTATCGTTTCCTGGATACACCAAGTGAATGGCTTGTCAGACCTGTA
TTGGAAACACAGGGCTGGGACCATGATGTTGGTTACGAGGGACTTAATGTTGAAAGATTG
TTTGCCGTAAAAGGTAAAGTTCCTCTATCAGTGTCTGGCCAGCTTACAAAAGACAAGAAG
GATTGCTCCCTGCAAATGGAGGTTGCAAGTTCAATTAAGCATGCTGAAGGTAAGACTACT
TCACTTGGGCTTGATTTGCAGTCTGTCGGCAGGGATATGGCATACACAATCCGTGGCGAA
TCGAGATTTAAGAACTTCAGGCGCAACAATACATCTGCTGGGATATCTGCTACGCTTCTT
GGGGATTCAGTATCAGCTGGTATGAAGATTGAGGACAAACTGATAGTGAACAAGCAGCTT
AGGGTCCTGGTTAGCAGCGGGGCCATGAGTGGGAGGGGAGACATGGCCTATGGAGGCCGC
CTTGAAGCAACGATGAGAGACAAAGATTACCCGATTGGGCGGATGCTTTCCACTGTTGCA
TTATCTGTTGTGGATTGGCACGGGGATCTGGCAATTGGCTGCAACATCCAGTCTCAGATC
CCCGCTGGAAGAGCTAGCAACTTGGTTGGCCACGCTAATCTAAGCAACAAGGGGACTGGC
CAAGTCGGGATTCGCCTCAACAGCTCGGAGCATCTTGAGATCGCACTCGTGGCCCTCGTG
CCGATATTCCAGAACATCATGAAGCTGTTACAGAATTACTCGGAATCTGGCTAG