Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029827_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:89015335:89016583:-1 gene:Zm00001d029827 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-expansin 1a

Sequence

ATGGGATCCCTGCAGCCCAACAATGCTGTCGCCGTGGCAGTGGCCGCCGCCGTAGTCCTG
GCTGCGCTCGCCACCGGCGGGTCGTGCTGGACCGACGACCGCCTCAAGGCGGTGCCGCCG
GGCCCCAACATCACGGCCGACTACGACGGCAAGTGGCTCGCCGCAAAGGCGACCTGGTAC
GGCAGTCCCGTCGGCGCCGGCCCCGACGACGACAACAACGGCGGCACGTGCGGGTTCACG
GGCGTGAACCTGCCGCCCTACAGCGGCATGGCTGCCTGCGGCAACTCCCCCATCTACAAG
GACGGCAAGGGCTGCGGCTCCTGCTACGAGATCAGGTGCACGTCGCCGCAGGAGTGCTCC
GACGAGCCGGTGGTGTACGCGCCCGGCAAGAACATCGTGTTCCACGTGGAGCACGGGTCC
GATCCGTCCCACCTGGCGCTGCTGGCCAAGTTCGTGGCGGGCGACGGCGACATCGTGCAG
ATGGACCTCAAGCAGGGGGCGTCGCTCAAGTGGGAGCCGATGAACCACTCCGTGGGCGCT
ATCTGGAGGATAGAGACGGCCCCGCACAAGCCGCTCAAGGGCCCCTTCTCCATCCGCCTC
ACCAGCGAGTCCGGCCAGGAGGTCGTCGCCGCCGACGTCATCCCGGAGGACTGGAAGCCC
GATACCACCTACCAGTCCAACGTCCAGTTCTAG

Peptide Sequence

PEP ID

Zm00001d029827_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:89015335:89016583:-1 gene:Zm00001d029827 transcript:Zm00001d029827_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-expansin 1a

Sequence

MGSLQPNNAVAVAVAAAVVLAALATGGSCWTDDRLKAVPPGPNITADYDGKWLAAKATWY
GSPVGAGPDDDNNGGTCGFTGVNLPPYSGMAACGNSPIYKDGKGCGSCYEIRCTSPQECS
DEPVVYAPGKNIVFHVEHGSDPSHLALLAKFVAGDGDIVQMDLKQGASLKWEPMNHSVGA
IWRIETAPHKPLKGPFSIRLTSESGQEVVAADVIPEDWKPDTTYQSNVQF

Transcript Sequence

Transcript ID

Zm00001d029827_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:89015335:89016583:-1 gene:Zm00001d029827 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-expansin 1a

Sequence

ACCAACACCGTCGTCGTCGTCTGTCACCGGCCACAACGACACTGATAAACTGATGACACT
GTGATCGGTATCGACACACACGTCCAAGGAAACACAGTATTATATTACTCTAGCGGCAGA
GAGATGGGATCCCTGCAGCCCAACAATGCTGTCGCCGTGGCAGTGGCCGCCGCCGTAGTC
CTGGCTGCGCTCGCCACCGGCGGGTCGTGCTGGACCGACGACCGCCTCAAGGCGGTGCCG
CCGGGCCCCAACATCACGGCCGACTACGACGGCAAGTGGCTCGCCGCAAAGGCGACCTGG
TACGGCAGTCCCGTCGGCGCCGGCCCCGACGACGACAACAACGGCGGCACGTGCGGGTTC
ACGGGCGTGAACCTGCCGCCCTACAGCGGCATGGCTGCCTGCGGCAACTCCCCCATCTAC
AAGGACGGCAAGGGCTGCGGCTCCTGCTACGAGATCAGGTGCACGTCGCCGCAGGAGTGC
TCCGACGAGCCGGTGGTGTACGCGCCCGGCAAGAACATCGTGTTCCACGTGGAGCACGGG
TCCGATCCGTCCCACCTGGCGCTGCTGGCCAAGTTCGTGGCGGGCGACGGCGACATCGTG
CAGATGGACCTCAAGCAGGGGGCGTCGCTCAAGTGGGAGCCGATGAACCACTCCGTGGGC
GCTATCTGGAGGATAGAGACGGCCCCGCACAAGCCGCTCAAGGGCCCCTTCTCCATCCGC
CTCACCAGCGAGTCCGGCCAGGAGGTCGTCGCCGCCGACGTCATCCCGGAGGACTGGAAG
CCCGATACCACCTACCAGTCCAACGTCCAGTTCTAG