Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029818_T020
CDS Infomation

cds chromosome:B73_RefGen_v4:1:88442684:88462890:1 gene:Zm00001d029818 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; protein
Sequence

ATGGAACTTGAAACTTTTGTTGAGAAAGAAAATTACTTTCAGGCATTCCAATTATTGCCT
GAATATTTGCAAATTTTGGAGAATTATTCAGGCCTTTCTGCTGTACAAGAAATGGGACGT
GGTATAGAGGCATGGTTAGTTCGGACAATCCAAAAATTGGACACCCATTTACTTGGTGTT
TGTCATATCTTTGATGCAGAAAACTATCTAACTGTTGTTGATGCATATGCACTAATGGGT
GATGTCAGTGGCATGGCTGAAAAGATGCAGAGTTTCTTCTTGCAGGAAGTGCTGTCTCGA
ACACACTATGTCCTGAAAGAAATGTTGGAAGAGGAGGTTGGAAATAATACACAGAAAAAT
AGGTTTACATATAGTGATCTTTGTGTTCAAATTCCTGAACCCAAACTTCGCCTCTGCTTG
TTGAGAACCCTAGAGTTTTTATTTTCATTGATGTGCTCATACTATACTATTATGAGCTTT
TCTTCAGGAGATAAGAATATTGACTCCAAGGGCCAAGATGAAGCATATAAGGATGGCACA
TCTCAGAATAGCAGCGAAACTTTAGTTAATTTAGGAAGAGGTCATTCAAGTGCAGCAGTC
ACTCAGGATGGTTCTGCAGCTGAAAAAATTGACAGAGCATCATCATCTGAGGTCAGCAAC
CCTGATACTAGTACATCAGAAACAGGTTCTCCATTCTATCAGCTTAGAACAGATGCTACG
AAACTTGTTGCACAAACATTTCAAAGAGGGCGAAGAAATCTTTGGCAGCTGGCAACAAGT
CGCTTATCTGTTCTATTATCTAGTTCGGCTGTTTGTTCAACTAGCACATACCAATTCCTG
AAGAATTATGAAGATCTTGCCATCTTCATTTTGGCTGGCGAAGCATTTTGTGGATTTGAA
GCTAGTGAGTTCCGCCAGAAGTTGAAGACTGTCTGTTTGAACTACATGGTGTCCTTTCAC
CGGCAAAATGTATATGCACTTAAGATGGTACTGGAAAAGGAGTCTTGGACAATAATGTCC
GCTGAAGCTTCACAAATAATTAGTTTAGCAGGTCTAACTGGTGATGGTGCTGCACTGTGC
TCTCCTACCAGTAGAAGTCCTAAGTTGCCAATAAATTGTTACCATGGGACAACTACAGCC
AACTCAGGAAAGGAAAAGCTCGGATTTGCTTCTTGGCTTGTGATTGAAAATCCATTTTCT
TTTAAGCTAGAAAATGGCTCTGCCGAATCCCCAAAGTCCAATATGCTTGTTGACTCATCA
GCTAGCAATAATCATGGCAATGGAAACAATTCATCTTTAGATGAAGAGAATGAAGACCTT
TTAGCGGATTTCATTGATGAAGATAGTCAGTTGCCTAGTAGGACACCAAAAGCGAAAATG
GTAAAAGGCAATTCTTTACATTGGAAAGATGGAGACATTTCATCACAGACAGGCTCATCA
CTTTCTCTATTAAGGATGATGGACAAATACGCCAGGCTGATGCAAAAGCTGGAAATTGTC
AATGTTGAGCTTTTTAAGGGTATCTCCCAACTATTTGGCATCTTTTACCACTACATATAT
GAGACATTTGGGAACCAAGACAAGAGTCAAAGCAGCAAGCCTTTGCCTGATCATCAATCA
TCTCGGCTTAAAGCCGCTTTATCAAAAATAACACAAGACTCTGATCAGTGGACAAAGCCA
AATACTGTTTCATATTCACCTTCATCCCCTTTGTCAAAAAATTCAACTTTTGGTCAAATG
GATGTGATGCCTACTGCACCTCCCAGTTCAATGTTCACCTCCTATGGGTTAAAGGAGAGA
TGTGCAGCTGCTGAAACATTATCATTGGTTGCTCGAATTTTGAACCGATCTAGAGCCCAT
CTACACTCAGTATTGTCTAAAAATAACAGTTCTGTTGTTGAGGAGTTCTTTAGGACACTG
GTGGACTCTGTTCCAGATTTGACAGAGCACATTCACAGAACGAGTGCGCGTATGCTTTTG
CATATTGATGGGTATCCAGATAAGATTGCGAATGCTAAATGGGAGGTAAAGGAGCTTGGA
ATAGAGCACAATGGATATGTTGATTTGTTACTGGGCGAGTTCAAACACTACAAAACAAGA
TTGGACCATGGAGGAATTTCTAGGGAGGTCGGTGTGAGAGAACTAATAAAATAG

Peptide Sequence

PEP ID

Zm00001d029818_P020
PEP Infomation

pep chromosome:B73_RefGen_v4:1:88442684:88462890:1 gene:Zm00001d029818 transcript:Zm00001d029818_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; protein
Sequence

MELETFVEKENYFQAFQLLPEYLQILENYSGLSAVQEMGRGIEAWLVRTIQKLDTHLLGV
CHIFDAENYLTVVDAYALMGDVSGMAEKMQSFFLQEVLSRTHYVLKEMLEEEVGNNTQKN
RFTYSDLCVQIPEPKLRLCLLRTLEFLFSLMCSYYTIMSFSSGDKNIDSKGQDEAYKDGT
SQNSSETLVNLGRGHSSAAVTQDGSAAEKIDRASSSEVSNPDTSTSETGSPFYQLRTDAT
KLVAQTFQRGRRNLWQLATSRLSVLLSSSAVCSTSTYQFLKNYEDLAIFILAGEAFCGFE
ASEFRQKLKTVCLNYMVSFHRQNVYALKMVLEKESWTIMSAEASQIISLAGLTGDGAALC
SPTSRSPKLPINCYHGTTTANSGKEKLGFASWLVIENPFSFKLENGSAESPKSNMLVDSS
ASNNHGNGNNSSLDEENEDLLADFIDEDSQLPSRTPKAKMVKGNSLHWKDGDISSQTGSS
LSLLRMMDKYARLMQKLEIVNVELFKGISQLFGIFYHYIYETFGNQDKSQSSKPLPDHQS
SRLKAALSKITQDSDQWTKPNTVSYSPSSPLSKNSTFGQMDVMPTAPPSSMFTSYGLKER
CAAAETLSLVARILNRSRAHLHSVLSKNNSSVVEEFFRTLVDSVPDLTEHIHRTSARMLL
HIDGYPDKIANAKWEVKELGIEHNGYVDLLLGEFKHYKTRLDHGGISREVGVRELIK

Transcript Sequence

Transcript ID

Zm00001d029818_T020
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:88442684:88462890:1 gene:Zm00001d029818 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; protein
Sequence

GATGGAACTTGAAACTTTTGTTGAGAAAGAAAATTACTTTCAGGCATTCCAATTATTGCC
TGAATATTTGCAAATTTTGGAGAATTATTCAGGCCTTTCTGCTGTACAAGAAATGGGACG
TGGTATAGAGGCATGGTTAGTTCGGACAATCCAAAAATTGGACACCCATTTACTTGGTGT
TTGTCATATCTTTGATGCAGAAAACTATCTAACTGTTGTTGATGCATATGCACTAATGGG
TGATGTCAGTGGCATGGCTGAAAAGATGCAGAGTTTCTTCTTGCAGGAAGTGCTGTCTCG
AACACACTATGTCCTGAAAGAAATGTTGGAAGAGGAGGTTGGAAATAATACACAGAAAAA
TAGGTTTACATATAGTGATCTTTGTGTTCAAATTCCTGAACCCAAACTTCGCCTCTGCTT
GTTGAGAACCCTAGAGTTTTTATTTTCATTGATGTGCTCATACTATACTATTATGAGCTT
TTCTTCAGGAGATAAGAATATTGACTCCAAGGGCCAAGATGAAGCATATAAGGATGGCAC
ATCTCAGAATAGCAGCGAAACTTTAGTTAATTTAGGAAGAGGTCATTCAAGTGCAGCAGT
CACTCAGGATGGTTCTGCAGCTGAAAAAATTGACAGAGCATCATCATCTGAGGTCAGCAA
CCCTGATACTAGTACATCAGAAACAGGTTCTCCATTCTATCAGCTTAGAACAGATGCTAC
GAAACTTGTTGCACAAACATTTCAAAGAGGGCGAAGAAATCTTTGGCAGCTGGCAACAAG
TCGCTTATCTGTTCTATTATCTAGTTCGGCTGTTTGTTCAACTAGCACATACCAATTCCT
GAAGAATTATGAAGATCTTGCCATCTTCATTTTGGCTGGCGAAGCATTTTGTGGATTTGA
AGCTAGTGAGTTCCGCCAGAAGTTGAAGACTGTCTGTTTGAACTACATGGTGTCCTTTCA
CCGGCAAAATGTATATGCACTTAAGATGGTACTGGAAAAGGAGTCTTGGACAATAATGTC
CGCTGAAGCTTCACAAATAATTAGTTTAGCAGGTCTAACTGGTGATGGTGCTGCACTGTG
CTCTCCTACCAGTAGAAGTCCTAAGTTGCCAATAAATTGTTACCATGGGACAACTACAGC
CAACTCAGGAAAGGAAAAGCTCGGATTTGCTTCTTGGCTTGTGATTGAAAATCCATTTTC
TTTTAAGCTAGAAAATGGCTCTGCCGAATCCCCAAAGTCCAATATGCTTGTTGACTCATC
AGCTAGCAATAATCATGGCAATGGAAACAATTCATCTTTAGATGAAGAGAATGAAGACCT
TTTAGCGGATTTCATTGATGAAGATAGTCAGTTGCCTAGTAGGACACCAAAAGCGAAAAT
GGTAAAAGGCAATTCTTTACATTGGAAAGATGGAGACATTTCATCACAGACAGGCTCATC
ACTTTCTCTATTAAGGATGATGGACAAATACGCCAGGCTGATGCAAAAGCTGGAAATTGT
CAATGTTGAGCTTTTTAAGGGTATCTCCCAACTATTTGGCATCTTTTACCACTACATATA
TGAGACATTTGGGAACCAAGACAAGAGTCAAAGCAGCAAGCCTTTGCCTGATCATCAATC
ATCTCGGCTTAAAGCCGCTTTATCAAAAATAACACAAGACTCTGATCAGTGGACAAAGCC
AAATACTGTTTCATATTCACCTTCATCCCCTTTGTCAAAAAATTCAACTTTTGGTCAAAT
GGATGTGATGCCTACTGCACCTCCCAGTTCAATGTTCACCTCCTATGGGTTAAAGGAGAG
ATGTGCAGCTGCTGAAACATTATCATTGGTTGCTCGAATTTTGAACCGATCTAGAGCCCA
TCTACACTCAGTATTGTCTAAAAATAACAGTTCTGTTGTTGAGGAGTTCTTTAGGACACT
GGTGGACTCTGTTCCAGATTTGACAGAGCACATTCACAGAACGAGTGCGCGTATGCTTTT
GCATATTGATGGGTATCCAGATAAGATTGCGAATGCTAAATGGGAGGTAAAGGAGCTTGG
AATAGAGCACAATGGATATGTTGATTTGTTACTGGGCGAGTTCAAACACTACAAAACAAG
ATTGGACCATGGAGGAATTTCTAGGGAGGTCGGTGTGAGAGAACTAATAAAATAGTTCCT
CTCTTTCTTTTCATCCCCTTCTCTTTTGACCTCACTTTGTTTTATTTTTATCCCACTGCT
AAGTAATGAACTTACTAGTGTTTATCCTGTTCCGCTTCGACTTGAAAAGGATGCTGTCCT
TTCTTACTCTGAATCATTTGACGACGGATTTACTGACCAGTGCAAATTCACACATGTGCT
TCCCAGCTCCAACACCTTCTGCTAGAGTACGGCGTAGAGAGCATATCGGAAGTTCTAGTC
GAAGGTCTCTCTAGAGTGAAGAGGTGCACCGATGAAGGGCGTGCTCTGATGTCACTCGAC
CTCCAGGTACTAATTAATGGGCTGCAGCACATCGTGGCATCAAATGTGAGGCCGAAGCTG
CAGACCGTGGACACTTTCATAAAGGCTTACTATCTACCGGAGACCGAGTACGTCCACTGG
GCGCGGTCTCATCCAGAATTCAGTACAAGTCAGGTAGTCGGGTTGGTTAACCTGGTGGCC
ACCATGAAAGGGTGGAGACGGAAGACGAGACTAGAAACCGTGGAGAAGATCGAGGCGGGG
CCATAGACTCGGTGACAGGTTTTTTTTTTTTTTTTTTTGCTGTGTTGTTTGCTTCAGCTG
CACATAGAGCTGTAATTTCCCCCCTCATTTTCTTTTGGTTTGATGACCCAGGAATAGGAG
GGAATCCATAGGAGAGGAAACCCCTTCCTATTCAATTTTGAATAGCAAGGTGTTTTCTCC
CCCATAGATCTACTCCATTTCCCTGATCATCAAATCAGCCATTAGAACCATTTTTTTGTT
GAACCCGTCGCCCGCTCACCCATATTGTATATTTTTAAGCGTTGACCCTGTATTATATCA
AGCGAGTTGACACTC