Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d029785_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:86770300:86776371:1 gene:Zm00001d029785 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable serine/threonine-protein kinase

Sequence

ATGGGTTGCTGGCGCTCGTCGCTGCGCTCAGGGCCCCACGCGGCGGAGAAGCCGCCCCGC
CACCGCCACCGCCCGCCACCGCCACCGACGAACGGCCCCACCTCCTCCCTGAACGCGCAG
CAGGCCGCGCCCCCGGCCCGCGCCTCCGGGGAAGTACCGGCGCTCGCCGAGTTCTCGCTG
GCGGAGCTCCGCGCGGCCACTGCCGGGTTCGCGCCGGGGAACATCGTCTCCGAGAGCGGC
GAGAAGGCGCCCAACCTCGTCTACAGAGGCCAGCTCAGGGGCCCCGGCGGCGCCCCGCCG
CGCGCAGTTGCCGTGAAGAAGTTCGCCAAGCTCGCGTGGCCCGACCCCAAGCAGTTCGCG
GAGGAGGCGAAGGGGGTCGGAGGCCTGCGGCACCGGAGCATGGCGAACCTTATCGGTTAT
TGCTGCGACGGCGACGATCGCCTGCTCGTCGCCGAGTTCATGCCCAACGACACCCTCGCC
AAGCACCTTTTCCACTGGGAAAACCAGACTATTGAGTGGGCTATGCGTCTGAGAGTTGCA
TACTACATTTCCCAAGCATTGGAATACTGTAGTACCAAGGGGTGGCCTTTATATCATGAC
CTAAATGCATACAGGGTCCTCTTTGATGAGAATGGTGACCCTCGGCTGTCATGCTTTGGT
CTGATGAAAAACAGCAGGGATGGAAAAAGCTATAGCACGAACCTAGCATATACACCTCCA
GAATATCTGAGAAATGGCAGGGTTACTCCAGAAAGTGTCATTTTCAGTTTTGGCACTGTA
CTTCTTGACCTTCTCAGTGGGAAACGCATACCGCCTTCACATGCGCTTGATATCATGAGA
GGCAGAAACATCCAAGCAGTTATGGATTCACATTTGGAGGGAAACTACTCAATTGAGGTG
GCTACTACATTGGTGAATCTTGCTTCTCAGTGTCTACAATATGAGCCAAGAGATCGTCCT
GACATAAAAAAGTTGGTTTCCATTCTGGAGCCTTTGCAGAAAAAAATAGAGGTACCGTCC
TATGTGATGCTTGGAATTGCAAAGCCAGTGGAAGAACCACAGGCACCTCCTACTCCACAG
CGCCCTCTTTCTCCCATGGGAGAAGCTTGTTCCAGAATGGACCTTACTGCCATCTATCAG
ATCCTATTCACAACGCATTACCGAGATGATGAAGGGAGCAATGAGCTGTCTTTTCAAGAA
TGGACACAGCAGATGAGGGATATGCTGGATGCAAGGAAACGTGGCGACTCTGCCTTCAAA
GACAAAGATTTTAAGGCAGCAATCGATTGCTATACTCAGTTTGTCGATGTGGGGATAATG
GTGTCACCGACTGTATTCGCCAGACGAAGCTTGTGCTACCTTATGTGTGACCAACCTGAT
GCGGCCCTCCGTGATGCAATGCAAGCGCAGATCGTCTACCCTGATTGGCCAACAGCATTC
TACATGCAGGCAGTTGCACTATCCAAGCTAAACATGCAGAGTGACGCCGTGGACATGCTG
AACGAGGCATCACAGCTAGAAGAGAAGAGGCAAAAGAGCACAAGAGTTCCTTGA

Peptide Sequence

PEP ID

Zm00001d029785_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:86770300:86776371:1 gene:Zm00001d029785 transcript:Zm00001d029785_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable serine/threonine-protein kinase

Sequence

MGCWRSSLRSGPHAAEKPPRHRHRPPPPPTNGPTSSLNAQQAAPPARASGEVPALAEFSL
AELRAATAGFAPGNIVSESGEKAPNLVYRGQLRGPGGAPPRAVAVKKFAKLAWPDPKQFA
EEAKGVGGLRHRSMANLIGYCCDGDDRLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVA
YYISQALEYCSTKGWPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPP
EYLRNGRVTPESVIFSFGTVLLDLLSGKRIPPSHALDIMRGRNIQAVMDSHLEGNYSIEV
ATTLVNLASQCLQYEPRDRPDIKKLVSILEPLQKKIEVPSYVMLGIAKPVEEPQAPPTPQ
RPLSPMGEACSRMDLTAIYQILFTTHYRDDEGSNELSFQEWTQQMRDMLDARKRGDSAFK
DKDFKAAIDCYTQFVDVGIMVSPTVFARRSLCYLMCDQPDAALRDAMQAQIVYPDWPTAF
YMQAVALSKLNMQSDAVDMLNEASQLEEKRQKSTRVP

Transcript Sequence

Transcript ID

Zm00001d029785_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:86770300:86776371:1 gene:Zm00001d029785 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable serine/threonine-protein kinase

Sequence

GTACACACGAGCGCCCCGCGGAAAGGGTAGCAAACGGCCCGGACAGTGAGCCGCGCACCT
TTCACACTTGACTTGATGGGTTGCTGGCGCTCGTCGCTGCGCTCAGGGCCCCACGCGGCG
GAGAAGCCGCCCCGCCACCGCCACCGCCCGCCACCGCCACCGACGAACGGCCCCACCTCC
TCCCTGAACGCGCAGCAGGCCGCGCCCCCGGCCCGCGCCTCCGGGGAAGTACCGGCGCTC
GCCGAGTTCTCGCTGGCGGAGCTCCGCGCGGCCACTGCCGGGTTCGCGCCGGGGAACATC
GTCTCCGAGAGCGGCGAGAAGGCGCCCAACCTCGTCTACAGAGGCCAGCTCAGGGGCCCC
GGCGGCGCCCCGCCGCGCGCAGTTGCCGTGAAGAAGTTCGCCAAGCTCGCGTGGCCCGAC
CCCAAGCAGTTCGCGGAGGAGGCGAAGGGGGTCGGAGGCCTGCGGCACCGGAGCATGGCG
AACCTTATCGGTTATTGCTGCGACGGCGACGATCGCCTGCTCGTCGCCGAGTTCATGCCC
AACGACACCCTCGCCAAGCACCTTTTCCACTGGGAAAACCAGACTATTGAGTGGGCTATG
CGTCTGAGAGTTGCATACTACATTTCCCAAGCATTGGAATACTGTAGTACCAAGGGGTGG
CCTTTATATCATGACCTAAATGCATACAGGGTCCTCTTTGATGAGAATGGTGACCCTCGG
CTGTCATGCTTTGGTCTGATGAAAAACAGCAGGGATGGAAAAAGCTATAGCACGAACCTA
GCATATACACCTCCAGAATATCTGAGAAATGGCAGGGTTACTCCAGAAAGTGTCATTTTC
AGTTTTGGCACTGTACTTCTTGACCTTCTCAGTGGGAAACGCATACCGCCTTCACATGCG
CTTGATATCATGAGAGGCAGAAACATCCAAGCAGTTATGGATTCACATTTGGAGGGAAAC
TACTCAATTGAGGTGGCTACTACATTGGTGAATCTTGCTTCTCAGTGTCTACAATATGAG
CCAAGAGATCGTCCTGACATAAAAAAGTTGGTTTCCATTCTGGAGCCTTTGCAGAAAAAA
ATAGAGGTACCGTCCTATGTGATGCTTGGAATTGCAAAGCCAGTGGAAGAACCACAGGCA
CCTCCTACTCCACAGCGCCCTCTTTCTCCCATGGGAGAAGCTTGTTCCAGAATGGACCTT
ACTGCCATCTATCAGATCCTATTCACAACGCATTACCGAGATGATGAAGGGAGCAATGAG
CTGTCTTTTCAAGAATGGACACAGCAGATGAGGGATATGCTGGATGCAAGGAAACGTGGC
GACTCTGCCTTCAAAGACAAAGATTTTAAGGCAGCAATCGATTGCTATACTCAGTTTGTC
GATGTGGGGATAATGGTGTCACCGACTGTATTCGCCAGACGAAGCTTGTGCTACCTTATG
TGTGACCAACCTGATGCGGCCCTCCGTGATGCAATGCAAGCGCAGATCGTCTACCCTGAT
TGGCCAACAGCATTCTACATGCAGGCAGTTGCACTATCCAAGCTAAACATGCAGAGTGAC
GCCGTGGACATGCTGAACGAGGCATCACAGCTAGAAGAGAAGAGGCAAAAGAGCACAAGA
GTTCCTTGAATGGCATTGCCAGCTCAGAGAAGTGGCACGTCTTCTATACATATAACATAG
ATTGCACACTATGTAGTACAGTAGTATATTCTCCAACCTTTCCCACCCTGTAAAAAGCGC
ATAGTATATTGCGTGGTCTAGAATTAGAAGTAAGGAGAAGTGAACTGCAGAGAAGATGCT
CTTTGCTCCCTGGACTCTGGAGCCCTGTGATGGCACTTGTGTGATAGGTTCAATTTTTTG
GGCCCATGTATATAACATCCGTTGCATGGGAGTTTAGAGTATAGGTTGCCGGTTGGTCAG
GAGGGCCCTGTCGCCGAAGATAATAAACATGTTATGTTTGTGAAAAACTGTCTGGGTATC
GCTTCC